| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
Click here to switch to the map view.
The map label for this gene is 16127033
Identifier: 16127033
GI number: 16127033
Start: 3012089
End: 3013975
Strand: Direct
Name: 16127033
Synonym: CC_2801
Alternate gene names: NA
Gene position: 3012089-3013975 (Clockwise)
Preceding gene: 16127032
Following gene: 16127037
Centisome position: 74.98
GC content: 68.52
Gene sequence:
>1887_bases ATGCCGGGGCCCAGATCGAACCCCTTACCTTTTCGGAAGCGAACCGACCTCAAGGCGCGAACACCCCAGACGCCCCGGAT GAATCTGGGCCCCGGCATTGGCTTCGCCGCACTGACGTGTCGCCGGGGAGGTCGGGGTATTGGGATGCTTTCGGGGTCCG GCCACGAACACGGGGCTTGTCCTGGCGGGATCGTCAGCCCCCCCCAAAACGCCCCACAGATACCGCTAACAATTTCCGCC CGACCCGCCACTTTCGATATTGATCTTACAAGTGAGCCGAGGTCATCTGACCTCACCATGCATCGCCTCACCCCCGCCCT CGCCGCCCTGCTCCTGGGCCTCGCCGCCACGTCCGCCCACGCCGAGCCCGCGCCCCGGATCGCCAAGATCGACGGCGTCC AGCGCCTGCTGGTCAATGACAAGCCGTACCTGATCCTGGGCGGCGAGCTGGGCAATTCCTCGAGCTCGGACCTGAAGGAC CTGTCAGGCCACTGGGCCGTGATGAAGGCGGCCAACCTCAACACCGTGCTGGCCCCGGTCGCCTGGGAGCAGGTCGAGCC CGTCGAGGGTAAGTTCGACTTCACGGTTCTGGACGGGATGATCCAGCAGGCCCGCGCCCACGAAATGCGGCTGGTCTTGC TGTGGTTCGGGGCCTGGAAGAACAGCATGTCGACCTACACCCCGGCCTGGGTGAAGCGCGATCCGGCCCGCTTCCCCTAC GCCCGCACGGGAGAGGGCAAGGCCGTCGAGATCCTCAGCGCCTCCTACCCCGCCACCCGCGACGCCGACGCCAAGGCCTT CGCCGCGATGATGGCCCACCTGAAGGCCGTCGACGGCGACAAGCGCACCGTCCTGATGGTTCAGGTCGAGAACGAGATCG GCATGCTGCCGGAGGCGCGCGACCGCACCAAGGCCGCCGAGGCCGACTTCAACAAGCCCGTGCCGGCCGCCGCCCTCAAG GTGCTGAGCGGCCAGATCAAGGGCAAGAAGGCCGGGACCTGGGAAGAGGTGTTCGGCGCGTCGCTGGCCACGGACGAGCT GTGGCAGGCCTGGACCTTCGGCCGCTATGTCGAGGCGCTGGCGGCGGCGGGCAAGAAGGCCTACGACCTGCCGATGTTCG TCAACGCGGCGCTGCCGCGTCCGGGCGCGGTTCCGGGCGGCTATCCCAGCGCCGGCCCCCTGCCCCACCTGATCGACCTG TGGCGGGCGGCCGCGCCGTCCTTGGACATGCTGTCGCCCGACATCTACTACCCGAACTTCACCGAGTGGATGCCGCCCTA CGATCGGCCCGACCAGCCCTTGTTCATCCCCGAGGCCGACCAGGCCGGCAAGACGCCCGCCCCGGGCAACGCCTTCTGGG CCATCGGCGAGCATGACGCGATCGGCTTCTCGCCGTTCTCGATCGAGCACCTGCCGCCCGAGGGCGTGAAGACCCTGGGC GCGGCCTATCGCCTGCTGGACCAGCTGACGCCCCTGATCACCACCCACGACGGCGGCAAGACCATGCGCGGCTTCCGCGC CCCGGTGGCCTATGACGGCACCGTCGACCTGACCCCGCGCAAGGCCAGCTTCGGCCCCTGGGACTTCACGGTGACCGTGG TCGATCCCTGGACGCCCAAGGACAAACAGGACTACGCCGCCCACGGCGGCCTGGTGATCCAGACCGGTGCGGACGAGTTC ATCGTCGCCGGCCGAGGGATCACCATGACCTTCGCGACCAAGGACGGGTCGGTGGGCCTGGAGACGGTGCGCGAGCTGCG CTTCGAGAACGGCCAGTGGGTCGACGGCCGCTGGCTGAACGGCGACCAGACCCACCAGGGCCGCCACATCCGCCTGCCAC CGACCGAGTTCGGCGTGCAGCGGGTGAGGTTGTATCGGTATCAGTGA
Upstream 100 bases:
>100_bases CGAGACTCGAAGCTGGTGTCAGTGCGCGACACCGTAGCGATCCTTGAGCTGAACTTCGCGGCGAAAGTTTGAGCTCCTTC TTCTCCGATCTCCCCGGCGA
Downstream 100 bases:
>100_bases GGCGGGGAGCCCTGTGAGGGCCTAGACGAGGGGCGGCCCGGAAGCGGACGTCGCGGATGTCAGTGAAGGGTGGAAGGCGG ACCATGCTCCCTCTCCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Galactosidase; DNA Recombination Protein RuvA; Glycoside Hydrolase Family Protein; Beta-Galactosidase Family; Mannonate Dehydratase; Glycosyl Hydrolase Family
Number of amino acids: Translated: 628; Mature: 627
Protein sequence:
>628_residues MPGPRSNPLPFRKRTDLKARTPQTPRMNLGPGIGFAALTCRRGGRGIGMLSGSGHEHGACPGGIVSPPQNAPQIPLTISA RPATFDIDLTSEPRSSDLTMHRLTPALAALLLGLAATSAHAEPAPRIAKIDGVQRLLVNDKPYLILGGELGNSSSSDLKD LSGHWAVMKAANLNTVLAPVAWEQVEPVEGKFDFTVLDGMIQQARAHEMRLVLLWFGAWKNSMSTYTPAWVKRDPARFPY ARTGEGKAVEILSASYPATRDADAKAFAAMMAHLKAVDGDKRTVLMVQVENEIGMLPEARDRTKAAEADFNKPVPAAALK VLSGQIKGKKAGTWEEVFGASLATDELWQAWTFGRYVEALAAAGKKAYDLPMFVNAALPRPGAVPGGYPSAGPLPHLIDL WRAAAPSLDMLSPDIYYPNFTEWMPPYDRPDQPLFIPEADQAGKTPAPGNAFWAIGEHDAIGFSPFSIEHLPPEGVKTLG AAYRLLDQLTPLITTHDGGKTMRGFRAPVAYDGTVDLTPRKASFGPWDFTVTVVDPWTPKDKQDYAAHGGLVIQTGADEF IVAGRGITMTFATKDGSVGLETVRELRFENGQWVDGRWLNGDQTHQGRHIRLPPTEFGVQRVRLYRYQ
Sequences:
>Translated_628_residues MPGPRSNPLPFRKRTDLKARTPQTPRMNLGPGIGFAALTCRRGGRGIGMLSGSGHEHGACPGGIVSPPQNAPQIPLTISA RPATFDIDLTSEPRSSDLTMHRLTPALAALLLGLAATSAHAEPAPRIAKIDGVQRLLVNDKPYLILGGELGNSSSSDLKD LSGHWAVMKAANLNTVLAPVAWEQVEPVEGKFDFTVLDGMIQQARAHEMRLVLLWFGAWKNSMSTYTPAWVKRDPARFPY ARTGEGKAVEILSASYPATRDADAKAFAAMMAHLKAVDGDKRTVLMVQVENEIGMLPEARDRTKAAEADFNKPVPAAALK VLSGQIKGKKAGTWEEVFGASLATDELWQAWTFGRYVEALAAAGKKAYDLPMFVNAALPRPGAVPGGYPSAGPLPHLIDL WRAAAPSLDMLSPDIYYPNFTEWMPPYDRPDQPLFIPEADQAGKTPAPGNAFWAIGEHDAIGFSPFSIEHLPPEGVKTLG AAYRLLDQLTPLITTHDGGKTMRGFRAPVAYDGTVDLTPRKASFGPWDFTVTVVDPWTPKDKQDYAAHGGLVIQTGADEF IVAGRGITMTFATKDGSVGLETVRELRFENGQWVDGRWLNGDQTHQGRHIRLPPTEFGVQRVRLYRYQ >Mature_627_residues PGPRSNPLPFRKRTDLKARTPQTPRMNLGPGIGFAALTCRRGGRGIGMLSGSGHEHGACPGGIVSPPQNAPQIPLTISAR PATFDIDLTSEPRSSDLTMHRLTPALAALLLGLAATSAHAEPAPRIAKIDGVQRLLVNDKPYLILGGELGNSSSSDLKDL SGHWAVMKAANLNTVLAPVAWEQVEPVEGKFDFTVLDGMIQQARAHEMRLVLLWFGAWKNSMSTYTPAWVKRDPARFPYA RTGEGKAVEILSASYPATRDADAKAFAAMMAHLKAVDGDKRTVLMVQVENEIGMLPEARDRTKAAEADFNKPVPAAALKV LSGQIKGKKAGTWEEVFGASLATDELWQAWTFGRYVEALAAAGKKAYDLPMFVNAALPRPGAVPGGYPSAGPLPHLIDLW RAAAPSLDMLSPDIYYPNFTEWMPPYDRPDQPLFIPEADQAGKTPAPGNAFWAIGEHDAIGFSPFSIEHLPPEGVKTLGA AYRLLDQLTPLITTHDGGKTMRGFRAPVAYDGTVDLTPRKASFGPWDFTVTVVDPWTPKDKQDYAAHGGLVIQTGADEFI VAGRGITMTFATKDGSVGLETVRELRFENGQWVDGRWLNGDQTHQGRHIRLPPTEFGVQRVRLYRYQ
Specific function: Unknown
COG id: COG1874
COG function: function code G; Beta-galactosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68232; Mature: 68100
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGPRSNPLPFRKRTDLKARTPQTPRMNLGPGIGFAALTCRRGGRGIGMLSGSGHEHGAC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCC PGGIVSPPQNAPQIPLTISARPATFDIDLTSEPRSSDLTMHRLTPALAALLLGLAATSAH CCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC AEPAPRIAKIDGVQRLLVNDKPYLILGGELGNSSSSDLKDLSGHWAVMKAANLNTVLAPV CCCCCCEEHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHCCCEEEEEECCCCEEECCC AWEQVEPVEGKFDFTVLDGMIQQARAHEMRLVLLWFGAWKNSMSTYTPAWVKRDPARFPY CHHHCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCHHHCCCCCCCCC ARTGEGKAVEILSASYPATRDADAKAFAAMMAHLKAVDGDKRTVLMVQVENEIGMLPEAR EECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCH DRTKAAEADFNKPVPAAALKVLSGQIKGKKAGTWEEVFGASLATDELWQAWTFGRYVEAL HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH AAAGKKAYDLPMFVNAALPRPGAVPGGYPSAGPLPHLIDLWRAAAPSLDMLSPDIYYPNF HHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCH TEWMPPYDRPDQPLFIPEADQAGKTPAPGNAFWAIGEHDAIGFSPFSIEHLPPEGVKTLG HHCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCHHHHHHH AAYRLLDQLTPLITTHDGGKTMRGFRAPVAYDGTVDLTPRKASFGPWDFTVTVVDPWTPK HHHHHHHHHCCEEEECCCCCCCHHCCCCEEECCEEECCCCCCCCCCCEEEEEEECCCCCC DKQDYAAHGGLVIQTGADEFIVAGRGITMTFATKDGSVGLETVRELRFENGQWVDGRWLN CCCCHHHCCCEEEEECCCCEEEECCCEEEEEEECCCCCCHHHHHHHHCCCCCEECCEECC GDQTHQGRHIRLPPTEFGVQRVRLYRYQ CCCCCCCCEEECCCHHHCHHEEEEEECC >Mature Secondary Structure PGPRSNPLPFRKRTDLKARTPQTPRMNLGPGIGFAALTCRRGGRGIGMLSGSGHEHGAC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCC PGGIVSPPQNAPQIPLTISARPATFDIDLTSEPRSSDLTMHRLTPALAALLLGLAATSAH CCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC AEPAPRIAKIDGVQRLLVNDKPYLILGGELGNSSSSDLKDLSGHWAVMKAANLNTVLAPV CCCCCCEEHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHCCCEEEEEECCCCEEECCC AWEQVEPVEGKFDFTVLDGMIQQARAHEMRLVLLWFGAWKNSMSTYTPAWVKRDPARFPY CHHHCCCCCCCCCHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCHHHCCCCCCCCC ARTGEGKAVEILSASYPATRDADAKAFAAMMAHLKAVDGDKRTVLMVQVENEIGMLPEAR EECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCH DRTKAAEADFNKPVPAAALKVLSGQIKGKKAGTWEEVFGASLATDELWQAWTFGRYVEAL HHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH AAAGKKAYDLPMFVNAALPRPGAVPGGYPSAGPLPHLIDLWRAAAPSLDMLSPDIYYPNF HHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCH TEWMPPYDRPDQPLFIPEADQAGKTPAPGNAFWAIGEHDAIGFSPFSIEHLPPEGVKTLG HHCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCHHHHHHH AAYRLLDQLTPLITTHDGGKTMRGFRAPVAYDGTVDLTPRKASFGPWDFTVTVVDPWTPK HHHHHHHHHCCEEEECCCCCCCHHCCCCEEECCEEECCCCCCCCCCCEEEEEEECCCCCC DKQDYAAHGGLVIQTGADEFIVAGRGITMTFATKDGSVGLETVRELRFENGQWVDGRWLN CCCCHHHCCCEEEEECCCCEEEECCCEEEEEEECCCCCCHHHHHHHHCCCCCEECCEECC GDQTHQGRHIRLPPTEFGVQRVRLYRYQ CCCCCCCCEEECCCHHHCHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA