| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is 16126978
Identifier: 16126978
GI number: 16126978
Start: 2959901
End: 2961154
Strand: Direct
Name: 16126978
Synonym: CC_2746
Alternate gene names: NA
Gene position: 2959901-2961154 (Clockwise)
Preceding gene: 16126977
Following gene: 16126986
Centisome position: 73.69
GC content: 66.35
Gene sequence:
>1254_bases ATGTCTCGCCCTTTGCTTTTCGCGCTGACCGCGCTCAGCCTCACGGCCGCGAGCTTGGCCCACGCCGCCGACAAAAAAGC CGCAGACAAACCCGCCCCGTCGGCGGTGTCCAAGGCCGACAAGGCGCTGCACGACAAGTTCCTGACGCTGGACACCCACC TCGACACCCCGGCCCACTTCGGCCGGCCCGGCTGGGACATCGCCGACCATCACGAGGTCGAGCACGACTTCAGCCAGGTC GACCTGCCGCGCATGAACCAAGGGGGCCTGGATGGCGGATTCTTCGTCGTCTACATCGGTCAGGGCGAGCTGACGGAGAA GGGCTACACCTACGCCCGCGACTACGCCCTGCATCGCACGATCGAGATCCGCGAGATGCTGGCGGCCAACCCCGACACGT TCGAAATGGCCCTGACCTCGGACGACGCCCGCCGCATCGCCAAGGCCGGCAAGAAGTTCGCCTTTGTCAGCATGGAAAAC AGCTGGCCCGTCGGCGAGGACCTCAGCCTGGTCGAGACCTTCTACAAGGAAGGCCTGCGGATGGCGGGGCCCGTCCACTT CCGCAATAACCAGTTGGCCGACAGCTCGACCGACCCCAAGGGCAAGATCTGGAACGGCTATTCGCCGCTGGGCCTGCGCT GGCTGGCCGAGGCCAATCGTCTGGGGATCGTCATCGATGTCAGCCACGCCAGCGACGATGTGGTCGACCAGTCGGTGGCC CTGTCCAAGGCGCCGATCATCGCCTCGCACTCGGGTCCGAAGGCGGTCTATGACCACCCGCGCAATCTCGACGACGCGCG CCTCAAGAAGATCGCCGACGCCGGCGGGGCCATCTGCATCAACTCGATCTATCTGACCGACACCACGCCCAGCCCCGAGC GCAAGGCGGCTCTGGAAGCCCTGGGCCGCGCGCCCGACATGAAGACCGCCACGCCCGAAGCGGTGAAGGCCTATGCCGAC AAGCGCGCCGCCATCGACAAGGCCCACCCGGCGGCCCGTGGCGACTTCGACCTCTACATGAAGAGCATGCTGCACGTCTT GAAGGTGGCCGGGCCCAAGGGCGTCTGCGTCGGCGCCGACTGGGACGGCGGCGGCGGCATGGACGGCTTCGAGGACATCA CCGACCTGCCCAAGATCACCGCCCGCCTGAAAGCCGAGGGCTATTCTGACGCCGACATCGAAGCCATCTGGAGCGGCAAT GTCCTGCGCATCGTCGACGCGGCCCAGGCCTATGCGAAGAGCGTGACGAAGTAG
Upstream 100 bases:
>100_bases CGGCGGCGCGCACGCGATCGCGTTCGACGCGTAGAAGAAATATCGTCAAGGGGCGAGACGCCGTGCCAAACTTCAGGACC TCAGTTTGACCGGAGCGTCC
Downstream 100 bases:
>100_bases GCGCGCTCCAATCCTCCCCCGCTAGGGGGAGGATTTAGAGGCCGTCCGCCGCCCCTCCCAAACCCGCCAAAGCATCAACG CTACAAACACCGCGCCATAG
Product: dipeptidase
Products: NA
Alternate protein names: ORF R [H]
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MSRPLLFALTALSLTAASLAHAADKKAADKPAPSAVSKADKALHDKFLTLDTHLDTPAHFGRPGWDIADHHEVEHDFSQV DLPRMNQGGLDGGFFVVYIGQGELTEKGYTYARDYALHRTIEIREMLAANPDTFEMALTSDDARRIAKAGKKFAFVSMEN SWPVGEDLSLVETFYKEGLRMAGPVHFRNNQLADSSTDPKGKIWNGYSPLGLRWLAEANRLGIVIDVSHASDDVVDQSVA LSKAPIIASHSGPKAVYDHPRNLDDARLKKIADAGGAICINSIYLTDTTPSPERKAALEALGRAPDMKTATPEAVKAYAD KRAAIDKAHPAARGDFDLYMKSMLHVLKVAGPKGVCVGADWDGGGGMDGFEDITDLPKITARLKAEGYSDADIEAIWSGN VLRIVDAAQAYAKSVTK
Sequences:
>Translated_417_residues MSRPLLFALTALSLTAASLAHAADKKAADKPAPSAVSKADKALHDKFLTLDTHLDTPAHFGRPGWDIADHHEVEHDFSQV DLPRMNQGGLDGGFFVVYIGQGELTEKGYTYARDYALHRTIEIREMLAANPDTFEMALTSDDARRIAKAGKKFAFVSMEN SWPVGEDLSLVETFYKEGLRMAGPVHFRNNQLADSSTDPKGKIWNGYSPLGLRWLAEANRLGIVIDVSHASDDVVDQSVA LSKAPIIASHSGPKAVYDHPRNLDDARLKKIADAGGAICINSIYLTDTTPSPERKAALEALGRAPDMKTATPEAVKAYAD KRAAIDKAHPAARGDFDLYMKSMLHVLKVAGPKGVCVGADWDGGGGMDGFEDITDLPKITARLKAEGYSDADIEAIWSGN VLRIVDAAQAYAKSVTK >Mature_416_residues SRPLLFALTALSLTAASLAHAADKKAADKPAPSAVSKADKALHDKFLTLDTHLDTPAHFGRPGWDIADHHEVEHDFSQVD LPRMNQGGLDGGFFVVYIGQGELTEKGYTYARDYALHRTIEIREMLAANPDTFEMALTSDDARRIAKAGKKFAFVSMENS WPVGEDLSLVETFYKEGLRMAGPVHFRNNQLADSSTDPKGKIWNGYSPLGLRWLAEANRLGIVIDVSHASDDVVDQSVAL SKAPIIASHSGPKAVYDHPRNLDDARLKKIADAGGAICINSIYLTDTTPSPERKAALEALGRAPDMKTATPEAVKAYADK RAAIDKAHPAARGDFDLYMKSMLHVLKVAGPKGVCVGADWDGGGGMDGFEDITDLPKITARLKAEGYSDADIEAIWSGNV LRIVDAAQAYAKSVTK
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI11641269, Length=410, Percent_Identity=26.0975609756098, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI189458885, Length=343, Percent_Identity=23.9067055393586, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI4758190, Length=343, Percent_Identity=23.9067055393586, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI193211608, Length=370, Percent_Identity=21.8918918918919, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI193211610, Length=370, Percent_Identity=21.6216216216216, Blast_Score=86, Evalue=9e-17, Organism=Drosophila melanogaster, GI281362638, Length=339, Percent_Identity=25.3687315634218, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI281362636, Length=339, Percent_Identity=25.3687315634218, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI161083233, Length=370, Percent_Identity=23.7837837837838, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI221475880, Length=381, Percent_Identity=24.4094488188976, Blast_Score=82, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000180 - InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 45069; Mature: 44938
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPLLFALTALSLTAASLAHAADKKAADKPAPSAVSKADKALHDKFLTLDTHLDTPAHF CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCHHC GRPGWDIADHHEVEHDFSQVDLPRMNQGGLDGGFFVVYIGQGELTEKGYTYARDYALHRT CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH IEIREMLAANPDTFEMALTSDDARRIAKAGKKFAFVSMENSWPVGEDLSLVETFYKEGLR HHHHHHHHCCCCCEEEEECCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCC MAGPVHFRNNQLADSSTDPKGKIWNGYSPLGLRWLAEANRLGIVIDVSHASDDVVDQSVA CCCCEEECCCCCCCCCCCCCCCEECCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHH LSKAPIIASHSGPKAVYDHPRNLDDARLKKIADAGGAICINSIYLTDTTPSPERKAALEA HCCCCEEECCCCCCHHHCCCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHH LGRAPDMKTATPEAVKAYADKRAAIDKAHPAARGDFDLYMKSMLHVLKVAGPKGVCVGAD HCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECC WDGGGGMDGFEDITDLPKITARLKAEGYSDADIEAIWSGNVLRIVDAAQAYAKSVTK CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEHHHHHHHHHHCCC >Mature Secondary Structure SRPLLFALTALSLTAASLAHAADKKAADKPAPSAVSKADKALHDKFLTLDTHLDTPAHF CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCHHC GRPGWDIADHHEVEHDFSQVDLPRMNQGGLDGGFFVVYIGQGELTEKGYTYARDYALHRT CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH IEIREMLAANPDTFEMALTSDDARRIAKAGKKFAFVSMENSWPVGEDLSLVETFYKEGLR HHHHHHHHCCCCCEEEEECCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCC MAGPVHFRNNQLADSSTDPKGKIWNGYSPLGLRWLAEANRLGIVIDVSHASDDVVDQSVA CCCCEEECCCCCCCCCCCCCCCEECCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHH LSKAPIIASHSGPKAVYDHPRNLDDARLKKIADAGGAICINSIYLTDTTPSPERKAALEA HCCCCEEECCCCCCHHHCCCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHH LGRAPDMKTATPEAVKAYADKRAAIDKAHPAARGDFDLYMKSMLHVLKVAGPKGVCVGAD HCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECC WDGGGGMDGFEDITDLPKITARLKAEGYSDADIEAIWSGNVLRIVDAAQAYAKSVTK CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2536663 [H]