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The map label for this gene is 16126972

Identifier: 16126972

GI number: 16126972

Start: 2954606

End: 2954998

Strand: Direct

Name: 16126972

Synonym: CC_2739

Alternate gene names: NA

Gene position: 2954606-2954998 (Clockwise)

Preceding gene: 16126971

Following gene: 16126973

Centisome position: 73.55

GC content: 61.58

Gene sequence:

>393_bases
GTGCTGGAGGTTTTGATGCAACGCCGGCGGGACGCGGCGGCCGCCAGAAAGCTCCTTGAGCGGCTCCTCAAGAGGCAACC
CGTGGAGCCCGAGCTCATAACGACTGATGGCCTTCGGTCCTATTCAGCAGCCTTGGCGGACCTGGGGTTAGAACGCCTTC
ATCGGCCGGGTAGGCTCCGAGAAAACAACAGGGCGGAGAACTCTCATCTCCCTGTTCGGCAGCGAAAACGACCGATTCAG
GGCTTCAAAAGCCAGACCTCCGCCCAACGCTTCCTCACCACTCGCGCAGCAGTCTACAACACCTTCTACACCCAGAGACA
TCTGATCAGCCGCCCTACCCTTCGGCGCTTCCGCGCCGAGGCTCATCACGCATGGGCGAAAGCCACGGGCTGA

Upstream 100 bases:

>100_bases
AAAGCCAAAGCTATGCAGGGGCTATCGGTTTCAGGGCGACGACGATTGGCTTGGCATCCGCCCGATAACTTCGACCAGCG
CCGTCGATGATGAAGGCGAG

Downstream 100 bases:

>100_bases
ATCGGGTAAGTATTGGCCGTCTGCAACCTGCGAAATTTAACCTGATGGGGTGGACGGCCCCTGTGTCCGGCGTCGAGTTC
CCCATAGGGTGGTCGTTGCT

Product: transposase

Products: NA

Alternate protein names: IS6 Family Transposase; Integrase Catalytic Subunit; Integrase Core Domain Protein; ISHne6 Transposase; Transposase Protein

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MLEVLMQRRRDAAAARKLLERLLKRQPVEPELITTDGLRSYSAALADLGLERLHRPGRLRENNRAENSHLPVRQRKRPIQ
GFKSQTSAQRFLTTRAAVYNTFYTQRHLISRPTLRRFRAEAHHAWAKATG

Sequences:

>Translated_130_residues
MLEVLMQRRRDAAAARKLLERLLKRQPVEPELITTDGLRSYSAALADLGLERLHRPGRLRENNRAENSHLPVRQRKRPIQ
GFKSQTSAQRFLTTRAAVYNTFYTQRHLISRPTLRRFRAEAHHAWAKATG
>Mature_130_residues
MLEVLMQRRRDAAAARKLLERLLKRQPVEPELITTDGLRSYSAALADLGLERLHRPGRLRENNRAENSHLPVRQRKRPIQ
GFKSQTSAQRFLTTRAAVYNTFYTQRHLISRPTLRRFRAEAHHAWAKATG

Specific function: Unknown

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15137; Mature: 15137

Theoretical pI: Translated: 12.19; Mature: 12.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEVLMQRRRDAAAARKLLERLLKRQPVEPELITTDGLRSYSAALADLGLERLHRPGRLR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCC
ENNRAENSHLPVRQRKRPIQGFKSQTSAQRFLTTRAAVYNTFYTQRHLISRPTLRRFRAE
CCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AHHAWAKATG
HHHHHHHCCC
>Mature Secondary Structure
MLEVLMQRRRDAAAARKLLERLLKRQPVEPELITTDGLRSYSAALADLGLERLHRPGRLR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCC
ENNRAENSHLPVRQRKRPIQGFKSQTSAQRFLTTRAAVYNTFYTQRHLISRPTLRRFRAE
CCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AHHAWAKATG
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA