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The map label for this gene is hfaA

Identifier: 16126864

GI number: 16126864

Start: 2844439

End: 2844882

Strand: Direct

Name: hfaA

Synonym: CC_2628

Alternate gene names: 16126864

Gene position: 2844439-2844882 (Clockwise)

Preceding gene: 16126861

Following gene: 16126865

Centisome position: 70.81

GC content: 65.32

Gene sequence:

>444_bases
ATGGCCTGGCATCGGAACATCAAGACGCGTGGGGCGATGGTCGTCGCCGCCGTCACGCTCGGCGCAAGCGGCGTCGCCGC
GGCCCAATCGATGTCGACCAATTCGGCTTCGTTCAACGCCGGCTATGGCCGCAGCTCGGGCCAGGAAAGCCGGATGGTCG
AGTATTCGACCCGCGACGCCAACGGCAACCGGGTGGTCGTGGACGGCGTCATGCTGACCGGCTCGGACCAGAGCGTTTTC
TCGTCCAGCCGCAGCTCGGGCTCGCTGGACGCCTATTCGGGCGTCGGCGCCGTGGGCGGTTACGCCGGCTCGACCGCGAT
CGGCAACAATCTGACGGTCATCACCCAGGGCAACAACAATACCGTCATCGTCAATTCCAGCCAGGTGAACAGCGGGAATG
TCACCGCCGGCGCGAACGTCGTGAAGGGCGGTACTCCGAAATGA

Upstream 100 bases:

>100_bases
GCTTAACCATTTTTTCGAGACCTTGGGGCTATCCCTCATGCTGTATCTTTTTGGCACGAGGGTTGCTTGCCGCTCCGTGT
CGACAGTCGCGGAGCCTCTC

Downstream 100 bases:

>100_bases
TGGTCAAGCGCACAGGCGCGGTCCTGGCCCTGCTGGCCACCGCGGCGCTCAGCGCCTGCGGCAGCACGCCGGTGGCCTCG
ACGGCCGGCAACTACGCCAA

Product: hfaA protein

Products: NA

Alternate protein names: Hfa-A; Protein hfaA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MAWHRNIKTRGAMVVAAVTLGASGVAAAQSMSTNSASFNAGYGRSSGQESRMVEYSTRDANGNRVVVDGVMLTGSDQSVF
SSSRSSGSLDAYSGVGAVGGYAGSTAIGNNLTVITQGNNNTVIVNSSQVNSGNVTAGANVVKGGTPK

Sequences:

>Translated_147_residues
MAWHRNIKTRGAMVVAAVTLGASGVAAAQSMSTNSASFNAGYGRSSGQESRMVEYSTRDANGNRVVVDGVMLTGSDQSVF
SSSRSSGSLDAYSGVGAVGGYAGSTAIGNNLTVITQGNNNTVIVNSSQVNSGNVTAGANVVKGGTPK
>Mature_146_residues
AWHRNIKTRGAMVVAAVTLGASGVAAAQSMSTNSASFNAGYGRSSGQESRMVEYSTRDANGNRVVVDGVMLTGSDQSVFS
SSRSSGSLDAYSGVGAVGGYAGSTAIGNNLTVITQGNNNTVIVNSSQVNSGNVTAGANVVKGGTPK

Specific function: Involved in attachment of the holdfast to the cell. The holdfast is a structure that allows the bacteria to firmly adheres to surfaces

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HFAA_CAUCR (P27342)

Other databases:

- EMBL:   M69129
- EMBL:   AF058792
- EMBL:   AE005673
- PIR:   A42610
- PIR:   H87574
- RefSeq:   NP_421428.1
- GeneID:   943983
- GenomeReviews:   AE005673_GR
- KEGG:   ccr:CC_2628
- NMPDR:   fig|190650.1.peg.2608
- TIGR:   CC_2628
- HOGENOM:   HBG400654
- OMA:   NDRSRTI
- ProtClustDB:   CLSK891068

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14699; Mature: 14568

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWHRNIKTRGAMVVAAVTLGASGVAAAQSMSTNSASFNAGYGRSSGQESRMVEYSTRDA
CCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
NGNRVVVDGVMLTGSDQSVFSSSRSSGSLDAYSGVGAVGGYAGSTAIGNNLTVITQGNNN
CCCEEEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
TVIVNSSQVNSGNVTAGANVVKGGTPK
EEEEECCCCCCCCEECCCEEECCCCCC
>Mature Secondary Structure 
AWHRNIKTRGAMVVAAVTLGASGVAAAQSMSTNSASFNAGYGRSSGQESRMVEYSTRDA
CCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
NGNRVVVDGVMLTGSDQSVFSSSRSSGSLDAYSGVGAVGGYAGSTAIGNNLTVITQGNNN
CCCEEEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
TVIVNSSQVNSGNVTAGANVVKGGTPK
EEEEECCCCCCCCEECCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1732204; 9973336; 11259647