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The map label for this gene is hfsF

Identifier: 16126665

GI number: 16126665

Start: 2632181

End: 2633623

Strand: Direct

Name: hfsF

Synonym: CC_2426

Alternate gene names: NA

Gene position: 2632181-2633623 (Clockwise)

Preceding gene: 16126664

Following gene: 16126666

Centisome position: 65.53

GC content: 71.59

Gene sequence:

>1443_bases
ATGTTCTGGCGCGGCGTCCTCGGCTATCTGCCGGTCAACATCGTCCAAGGCGTGGTGGGCCTGCTCACCATCGTCCTCTT
CACGCGCGTGCTGGATCCGGCGCAATACGGCGTGTACGCCCTGGCGTTCTCGGTATTCAGCCTGGTGCAGACCGGTCTGC
TGACCTGGACCGAGGCGGCCATGGCGCGGTTCCTGGCCACGCGGAGCGAGGACGGTCGGATCGCCGACCACTTCGCGACG
CTCTATCGGCTCTGGCTCGGCGCAGCCCTGGCCGTGCCTGTGGTCGGCGGCGCGGTCCTGGCCTTCGCACCGCTGAACGG
CCCCCTGCGTATCGCGCTCGCGGCCGGCTTCGCCGCCGTGCTGGTCAACAGCCTGGTGAAGCTGGCGCAGGAACGTCGAC
GTGCGGCGGGCGAGGTCTCGGGCGCGGCTATGCTGTCGATGGTCCAGACCGCCGGCGGCTTCGCCCTGGGCCTGGGCTTC
GCGCTGGCGGGCCTGGGCGGCGCGGCGCCGCTGCTGGGGATCGGGATCGTGTCCCTGGCCTGCGTCGCCGTGGTGCTGTC
GCGCGAGTTGAAGTTCATGACCGGCGGACGCTTCGACAAGGCGCTTGCCCGGACCTACTTCACCTATGGCGCGCCCGTGG
CGCTGTCGCTGATCCTGGCCTTGGTGCTGGCCAGCACCGACCGCCTGCTGCTGGCGACCTTCCTCGACGAGGCCACGGTC
GGCGTCTACCACGCCGGCTACTCGCTGGGCAGCCGCACGCTCGACGTGGTGTTCATCTGGCTGGGCATGGCCGGCGGTCC
TGCCTTGATCCAGGCGCTGGAGCGCGGCGGCCAGCCGGCCCTGGAAGACGCCGCCCGCGAGCAGGCCGGCGTCATCGTGC
TGCTGACCCTGCCCGCCGCCGTCGGCCTCGCGCTCGTCGCCCGCCCCCTGGCGGACCTGATGGTCGGCGAGGCCATGCGC
GAACAAGCCAGTCACGTCACCCCATGGATCGCCGCCAGCGGCTGGCTGTCGGGCGTCACCACCTACTATCTGCTGCAGGC
CTTCACCCTGGCGCGTCGGACCTCGCTGCTGATCGTCAGCATGAGCGCGCCGGCCCTGGCCAATGTGGCCCTGAACCTTG
TCCTGATCCCGCGCCTTGGCCTCGACGGCGCGCTGATCGCCACGACGGTCAGCTACGGCCTGGGCGCCGTCGCGGCCTGG
GCGCTGGGCCGCCGCGCCTGCCCTCTACCGATCCCCTGGGCGGTGCTGGCCAAGGCCGCCGGCGCGAGCCTGGCCATGGC
CGCCTGCGTCGCGCTGCTTCCCGCGCCGGGCGGGCTGCTTGAACTGGTCCTGAAGGCCAGCGTCGGCGCTGCCGTCTACG
GCGCCCTGGTGCTGGGCCTCGATGTCGCGGGTCTTCGCGGCAAGCTCTCCCTGATCCTTCGTCGAAAGGCGCAAGCCGCA
TGA

Upstream 100 bases:

>100_bases
GAGTACATCGAGCGTCAGTCGTTCTGGCTGGACCTCTACATCATCGCCATGACCATCCCCTGCCTGTTGGGGGATCGGTC
CGCCGTGCGCTAGGCCGCGC

Downstream 100 bases:

>100_bases
ACGCGCCCGTCAACGAGCTGCGACTCGAGAACGCCGCCTGGGCCGCGGCGCAGCCGCGCCTGTCGGTGCTGATCCCGACC
TTCCGCGACGACCCCAGCGC

Product: putative polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MFWRGVLGYLPVNIVQGVVGLLTIVLFTRVLDPAQYGVYALAFSVFSLVQTGLLTWTEAAMARFLATRSEDGRIADHFAT
LYRLWLGAALAVPVVGGAVLAFAPLNGPLRIALAAGFAAVLVNSLVKLAQERRRAAGEVSGAAMLSMVQTAGGFALGLGF
ALAGLGGAAPLLGIGIVSLACVAVVLSRELKFMTGGRFDKALARTYFTYGAPVALSLILALVLASTDRLLLATFLDEATV
GVYHAGYSLGSRTLDVVFIWLGMAGGPALIQALERGGQPALEDAAREQAGVIVLLTLPAAVGLALVARPLADLMVGEAMR
EQASHVTPWIAASGWLSGVTTYYLLQAFTLARRTSLLIVSMSAPALANVALNLVLIPRLGLDGALIATTVSYGLGAVAAW
ALGRRACPLPIPWAVLAKAAGASLAMAACVALLPAPGGLLELVLKASVGAAVYGALVLGLDVAGLRGKLSLILRRKAQAA

Sequences:

>Translated_480_residues
MFWRGVLGYLPVNIVQGVVGLLTIVLFTRVLDPAQYGVYALAFSVFSLVQTGLLTWTEAAMARFLATRSEDGRIADHFAT
LYRLWLGAALAVPVVGGAVLAFAPLNGPLRIALAAGFAAVLVNSLVKLAQERRRAAGEVSGAAMLSMVQTAGGFALGLGF
ALAGLGGAAPLLGIGIVSLACVAVVLSRELKFMTGGRFDKALARTYFTYGAPVALSLILALVLASTDRLLLATFLDEATV
GVYHAGYSLGSRTLDVVFIWLGMAGGPALIQALERGGQPALEDAAREQAGVIVLLTLPAAVGLALVARPLADLMVGEAMR
EQASHVTPWIAASGWLSGVTTYYLLQAFTLARRTSLLIVSMSAPALANVALNLVLIPRLGLDGALIATTVSYGLGAVAAW
ALGRRACPLPIPWAVLAKAAGASLAMAACVALLPAPGGLLELVLKASVGAAVYGALVLGLDVAGLRGKLSLILRRKAQAA
>Mature_480_residues
MFWRGVLGYLPVNIVQGVVGLLTIVLFTRVLDPAQYGVYALAFSVFSLVQTGLLTWTEAAMARFLATRSEDGRIADHFAT
LYRLWLGAALAVPVVGGAVLAFAPLNGPLRIALAAGFAAVLVNSLVKLAQERRRAAGEVSGAAMLSMVQTAGGFALGLGF
ALAGLGGAAPLLGIGIVSLACVAVVLSRELKFMTGGRFDKALARTYFTYGAPVALSLILALVLASTDRLLLATFLDEATV
GVYHAGYSLGSRTLDVVFIWLGMAGGPALIQALERGGQPALEDAAREQAGVIVLLTLPAAVGLALVARPLADLMVGEAMR
EQASHVTPWIAASGWLSGVTTYYLLQAFTLARRTSLLIVSMSAPALANVALNLVLIPRLGLDGALIATTVSYGLGAVAAW
ALGRRACPLPIPWAVLAKAAGASLAMAACVALLPAPGGLLELVLKASVGAAVYGALVLGLDVAGLRGKLSLILRRKAQAA

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49443; Mature: 49443

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWRGVLGYLPVNIVQGVVGLLTIVLFTRVLDPAQYGVYALAFSVFSLVQTGLLTWTEAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MARFLATRSEDGRIADHFATLYRLWLGAALAVPVVGGAVLAFAPLNGPLRIALAAGFAAV
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEHHHHHHHHHH
LVNSLVKLAQERRRAAGEVSGAAMLSMVQTAGGFALGLGFALAGLGGAAPLLGIGIVSLA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
CVAVVLSRELKFMTGGRFDKALARTYFTYGAPVALSLILALVLASTDRLLLATFLDEATV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GVYHAGYSLGSRTLDVVFIWLGMAGGPALIQALERGGQPALEDAAREQAGVIVLLTLPAA
HHEECCHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCEEEEEHHHHH
VGLALVARPLADLMVGEAMREQASHVTPWIAASGWLSGVTTYYLLQAFTLARRTSLLIVS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE
MSAPALANVALNLVLIPRLGLDGALIATTVSYGLGAVAAWALGRRACPLPIPWAVLAKAA
ECCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC
GASLAMAACVALLPAPGGLLELVLKASVGAAVYGALVLGLDVAGLRGKLSLILRRKAQAA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFWRGVLGYLPVNIVQGVVGLLTIVLFTRVLDPAQYGVYALAFSVFSLVQTGLLTWTEAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MARFLATRSEDGRIADHFATLYRLWLGAALAVPVVGGAVLAFAPLNGPLRIALAAGFAAV
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEHHHHHHHHHH
LVNSLVKLAQERRRAAGEVSGAAMLSMVQTAGGFALGLGFALAGLGGAAPLLGIGIVSLA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
CVAVVLSRELKFMTGGRFDKALARTYFTYGAPVALSLILALVLASTDRLLLATFLDEATV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GVYHAGYSLGSRTLDVVFIWLGMAGGPALIQALERGGQPALEDAAREQAGVIVLLTLPAA
HHEECCHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCEEEEEHHHHH
VGLALVARPLADLMVGEAMREQASHVTPWIAASGWLSGVTTYYLLQAFTLARRTSLLIVS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE
MSAPALANVALNLVLIPRLGLDGALIATTVSYGLGAVAAWALGRRACPLPIPWAVLAKAA
ECCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC
GASLAMAACVALLPAPGGLLELVLKASVGAAVYGALVLGLDVAGLRGKLSLILRRKAQAA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA