Click here to switch to the map view.

The map label for this gene is 16126578

Identifier: 16126578

GI number: 16126578

Start: 2541925

End: 2542524

Strand: Direct

Name: 16126578

Synonym: CC_2339

Alternate gene names: NA

Gene position: 2541925-2542524 (Clockwise)

Preceding gene: 16126577

Following gene: 16126590

Centisome position: 63.28

GC content: 63.83

Gene sequence:

>600_bases
GTGCCGAGACCGGAACGAGACCTGAGAGAGGCCTGCCTCAAGGAGGCGCTGGCCATTATCGAGCATGAGGGCGTGGAGCG
GCTAAGCTTGCGGGACGTGGCGCGACGGCTCGGGGTGTCGCATCAGGCGCCCTATAGGCATTTTCCAAGCCGGGACCACA
TCCTGGCCGAAGTCGTCGCGCGCGCCTTCGAGGAGTTCGCCCGCCATCTTGATGCGCACCCCAAGAGCAGCGATCCGGAC
CGCGACATGGGCCTCATGGGCGAAGCCTATCTTGCGTACGCCGCCAAGCATCCCCTGCAATATCAGCTCATGTTCGCCAC
CCCTCTGCCAAGCACCGACACGCATCCAGAAATGATGGCCAAGGCGCGCCACGCATTCGACATGCTGCTCAGCGCGCTCC
GGCGAAAGGCCGCTGAGCAGGGGCGGAGCTTGGCTGAAGAGGCCATCGTTCTTGACGCGCTCTTCATCTGGTCCGGCCTG
CATGGATTGGCGATGCTGCGCAATTCGTCGGCGTTCGATACGTTGGGGCTAAGGGGCGCTGCGATAGAGAACAGCACCGC
CCATCTTCTCTCCCGTTTCGGCGACGCGCTCGGCCACTGA

Upstream 100 bases:

>100_bases
TCCTAGTAGACAGTGTCAACACGACAATATGGAGCGTGAGTAGACAGCGTCAACAGGCACGTGCATTTTTCTCGTTGAGA
TCTGCAGCGGAAGGCCGAGA

Downstream 100 bases:

>100_bases
GGGCGCCGACGAAAGGCCTGATCGCCATTTGTGACGCGCAACCCGCGCCGTCAAAAGCGTTCGCTGTGAACGATCGGCCC
TGAACGTCGCTGGACGACAG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; AcrR Family Transcriptional Regulator; Regulatory Protein Tetr; TetR-Family Transcriptional Regulator

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MPRPERDLREACLKEALAIIEHEGVERLSLRDVARRLGVSHQAPYRHFPSRDHILAEVVARAFEEFARHLDAHPKSSDPD
RDMGLMGEAYLAYAAKHPLQYQLMFATPLPSTDTHPEMMAKARHAFDMLLSALRRKAAEQGRSLAEEAIVLDALFIWSGL
HGLAMLRNSSAFDTLGLRGAAIENSTAHLLSRFGDALGH

Sequences:

>Translated_199_residues
MPRPERDLREACLKEALAIIEHEGVERLSLRDVARRLGVSHQAPYRHFPSRDHILAEVVARAFEEFARHLDAHPKSSDPD
RDMGLMGEAYLAYAAKHPLQYQLMFATPLPSTDTHPEMMAKARHAFDMLLSALRRKAAEQGRSLAEEAIVLDALFIWSGL
HGLAMLRNSSAFDTLGLRGAAIENSTAHLLSRFGDALGH
>Mature_198_residues
PRPERDLREACLKEALAIIEHEGVERLSLRDVARRLGVSHQAPYRHFPSRDHILAEVVARAFEEFARHLDAHPKSSDPDR
DMGLMGEAYLAYAAKHPLQYQLMFATPLPSTDTHPEMMAKARHAFDMLLSALRRKAAEQGRSLAEEAIVLDALFIWSGLH
GLAMLRNSSAFDTLGLRGAAIENSTAHLLSRFGDALGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22198; Mature: 22066

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPERDLREACLKEALAIIEHEGVERLSLRDVARRLGVSHQAPYRHFPSRDHILAEVVA
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
RAFEEFARHLDAHPKSSDPDRDMGLMGEAYLAYAAKHPLQYQLMFATPLPSTDTHPEMMA
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHH
KARHAFDMLLSALRRKAAEQGRSLAEEAIVLDALFIWSGLHGLAMLRNSSAFDTLGLRGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC
AIENSTAHLLSRFGDALGH
CCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRPERDLREACLKEALAIIEHEGVERLSLRDVARRLGVSHQAPYRHFPSRDHILAEVVA
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
RAFEEFARHLDAHPKSSDPDRDMGLMGEAYLAYAAKHPLQYQLMFATPLPSTDTHPEMMA
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHH
KARHAFDMLLSALRRKAAEQGRSLAEEAIVLDALFIWSGLHGLAMLRNSSAFDTLGLRGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC
AIENSTAHLLSRFGDALGH
CCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA