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The map label for this gene is 16126572

Identifier: 16126572

GI number: 16126572

Start: 2535784

End: 2537223

Strand: Direct

Name: 16126572

Synonym: CC_2333

Alternate gene names: NA

Gene position: 2535784-2537223 (Clockwise)

Preceding gene: 16126571

Following gene: 16126573

Centisome position: 63.13

GC content: 67.85

Gene sequence:

>1440_bases
ATGCAAGTGGTTCGCCTCGCCTCAGAAGTCGATTTCGCCGGCTGGCGAAGGGCCGCCCGGGTCCTGCGGGCCGAGGGCGC
GCGCCCCGAATCGCTCGTCTGGACGGTGGAGCGCGAGCTCTTCGACAATGATGAGCCGGTGACGGACGCGGCAACGACGT
TCGTCGTTCCAGCCGCCTTCATGGAAATGGCTCAACAGGTCGTGCTGAACCGGTCGCTGGATCGGTTCGCCCTGCTCTAC
CGCATTCTCTGGCGACTGGAGCGCGAGCCGCGATTGATCGAGAACCCCGCCGATCAGGACATGGCGCGCGCCCGCGACAT
GGCCAAGGCCGTCAGCCGCGCCGCCCACAAGATGAAGGCGTTCGTCCGCTTTCGCCGGGTGGAGGACGCAGCCAAGGAAA
CCTACGCGGCCTGGTTCGAACCCGCCCACCGGGTGACCGAGGCTACGGCGCCCTTCTTCGCGCGCCGCTTCTCCAACATG
AACTGGACCATCCTGACACCCGACGTCTGCGTGGCCTGGAACGGGGAGCGGCTATGGGTTTCGGAGGGCGCGGATCCCGC
CGACGCGCCGTCCGAAGACGCCCAGGAAGCGCTCTGGCGAACCTACTATGCGTCGATCTTCAATCCGGCCCGTCTCAACC
CACGCCAGATGCGCCAGGAAATGCCCAAGCGGTACTGGCGTAACCTCCCAGAGGCCGCGCTCATTCCAGGCCTTATCGAA
GCCGCCCAGGATCGCGCGGCCGCCATGGTCACGACGCCGCCGCGTCCCCCGTCAGAACGCGTTCTGAAGGCCGCGCAGCG
CCATGCTCGGGATGCGCCATACAACGCTGGTGCGCCGACCACTCTGGACGCCGTGCGCGCCGGCGTCAGCGTCTGTCGGC
GCTGCGATCTGTGGCGGGAGGCGACTCAGGGCGTTCCGGGTGACGGGGCGCCCAGCGCGCCCTTGATGTTTGTCGGCGAG
CAGCCCGGCGATCAGGAGGATCTCGCGGGCAGCCCCTTGGTGGGTCCTGCAGGACAGATATTCGACCGAGCGCTCGCCGA
GGTGAGTGTGCGGCGCGAGCAGACCTACGTCACGAACGCGGTGAAGCACTTCAAGCATGAACTCAACGGGAAACGCCGCC
TGCACAAGACCCCCACCCAGGGCGAGGTGAGCGCGTGTCGATGGTGGCTGGACGCGGAGCGGCGGTTGGTCAGGCCGACG
GTCATCGTGATGCTGGGCGCGACCGCCGCCTTCGGCGTCATGGGGCGGCCAACGCCTGTCCGTGAAACCAGAGGACGCCC
ACTGCCCTTGCCGGACGGGGTCCAGGGGCTCGTGACCTTTCATCCGTCGTACCTGCTGCGCCTGCCGGACGCTGCGGCGA
GAGAGAACGCCTACCGCTCTTTCGTGGACGATCTTCGTCTGGCGGGCCGGCTGGCCGGCCTGGCCGCGACATCCCCTTGA

Upstream 100 bases:

>100_bases
AACCTTTCGTCGTGACGGCCGACTGGCGTCCCGGCGCCCTGACCGACCGCGACGACCTGAAGGCCGTCTTGAGCCCGGCC
GTTCAGTTGAGCCTGTTCTG

Downstream 100 bases:

>100_bases
GGCCAGCGGGTGATCTCTGGGCCATCAAGACAGCGCCCAGGGCGTCAAGCGCCCGCGAGAAGGTGAACGACCAGCGCCGA
AGACACCGAGGTCAGAAACG

Product: phage SPO1 DNA polymerase-like protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Uracil DNA Glycosylase Superfamily Protein; DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Superfamily; Phage SPO1 DNA Polymerase-Like Protein; DNA-Directed DNA Polymerase Protein; Uracil-DNA Glycosylase Family 4 Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase; DNA-Directed DNA Polymerase; DNA Glycosylase; DNA Polymerase-Related Protein; Helicase/Glycosylase; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil DNA Glycosylase Protein; Uracil DNA Glycosylase; DNA-Directed DNA Polymerase Bacteriophage-Type; Phage DNA Polymerase-Related Protein; Uracil DNA Glycosylase Superfamily; Phage DNA Polymerase; Phage SPO1 DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil DNA Glycosylase Family Protein; Transcriptional Regulator Fis Family; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein; Leucyl-TRNA Synthetase

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MQVVRLASEVDFAGWRRAARVLRAEGARPESLVWTVERELFDNDEPVTDAATTFVVPAAFMEMAQQVVLNRSLDRFALLY
RILWRLEREPRLIENPADQDMARARDMAKAVSRAAHKMKAFVRFRRVEDAAKETYAAWFEPAHRVTEATAPFFARRFSNM
NWTILTPDVCVAWNGERLWVSEGADPADAPSEDAQEALWRTYYASIFNPARLNPRQMRQEMPKRYWRNLPEAALIPGLIE
AAQDRAAAMVTTPPRPPSERVLKAAQRHARDAPYNAGAPTTLDAVRAGVSVCRRCDLWREATQGVPGDGAPSAPLMFVGE
QPGDQEDLAGSPLVGPAGQIFDRALAEVSVRREQTYVTNAVKHFKHELNGKRRLHKTPTQGEVSACRWWLDAERRLVRPT
VIVMLGATAAFGVMGRPTPVRETRGRPLPLPDGVQGLVTFHPSYLLRLPDAAARENAYRSFVDDLRLAGRLAGLAATSP

Sequences:

>Translated_479_residues
MQVVRLASEVDFAGWRRAARVLRAEGARPESLVWTVERELFDNDEPVTDAATTFVVPAAFMEMAQQVVLNRSLDRFALLY
RILWRLEREPRLIENPADQDMARARDMAKAVSRAAHKMKAFVRFRRVEDAAKETYAAWFEPAHRVTEATAPFFARRFSNM
NWTILTPDVCVAWNGERLWVSEGADPADAPSEDAQEALWRTYYASIFNPARLNPRQMRQEMPKRYWRNLPEAALIPGLIE
AAQDRAAAMVTTPPRPPSERVLKAAQRHARDAPYNAGAPTTLDAVRAGVSVCRRCDLWREATQGVPGDGAPSAPLMFVGE
QPGDQEDLAGSPLVGPAGQIFDRALAEVSVRREQTYVTNAVKHFKHELNGKRRLHKTPTQGEVSACRWWLDAERRLVRPT
VIVMLGATAAFGVMGRPTPVRETRGRPLPLPDGVQGLVTFHPSYLLRLPDAAARENAYRSFVDDLRLAGRLAGLAATSP
>Mature_479_residues
MQVVRLASEVDFAGWRRAARVLRAEGARPESLVWTVERELFDNDEPVTDAATTFVVPAAFMEMAQQVVLNRSLDRFALLY
RILWRLEREPRLIENPADQDMARARDMAKAVSRAAHKMKAFVRFRRVEDAAKETYAAWFEPAHRVTEATAPFFARRFSNM
NWTILTPDVCVAWNGERLWVSEGADPADAPSEDAQEALWRTYYASIFNPARLNPRQMRQEMPKRYWRNLPEAALIPGLIE
AAQDRAAAMVTTPPRPPSERVLKAAQRHARDAPYNAGAPTTLDAVRAGVSVCRRCDLWREATQGVPGDGAPSAPLMFVGE
QPGDQEDLAGSPLVGPAGQIFDRALAEVSVRREQTYVTNAVKHFKHELNGKRRLHKTPTQGEVSACRWWLDAERRLVRPT
VIVMLGATAAFGVMGRPTPVRETRGRPLPLPDGVQGLVTFHPSYLLRLPDAAARENAYRSFVDDLRLAGRLAGLAATSP

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 53578; Mature: 53578

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVVRLASEVDFAGWRRAARVLRAEGARPESLVWTVERELFDNDEPVTDAATTFVVPAAF
CCHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHEEHHHHHHCCCCCCCHHHHHHHHHHHHH
MEMAQQVVLNRSLDRFALLYRILWRLEREPRLIENPADQDMARARDMAKAVSRAAHKMKA
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
FVRFRRVEDAAKETYAAWFEPAHRVTEATAPFFARRFSNMNWTILTPDVCVAWNGERLWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCEEEE
SEGADPADAPSEDAQEALWRTYYASIFNPARLNPRQMRQEMPKRYWRNLPEAALIPGLIE
ECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
AAQDRAAAMVTTPPRPPSERVLKAAQRHARDAPYNAGAPTTLDAVRAGVSVCRRCDLWRE
HHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ATQGVPGDGAPSAPLMFVGEQPGDQEDLAGSPLVGPAGQIFDRALAEVSVRREQTYVTNA
HHCCCCCCCCCCCCEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VKHFKHELNGKRRLHKTPTQGEVSACRWWLDAERRLVRPTVIVMLGATAAFGVMGRPTPV
HHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHEEEEHHHHHHCCCCCCCCC
RETRGRPLPLPDGVQGLVTFHPSYLLRLPDAAARENAYRSFVDDLRLAGRLAGLAATSP
HHCCCCCCCCCCCCCHHHHCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQVVRLASEVDFAGWRRAARVLRAEGARPESLVWTVERELFDNDEPVTDAATTFVVPAAF
CCHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHEEHHHHHHCCCCCCCHHHHHHHHHHHHH
MEMAQQVVLNRSLDRFALLYRILWRLEREPRLIENPADQDMARARDMAKAVSRAAHKMKA
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
FVRFRRVEDAAKETYAAWFEPAHRVTEATAPFFARRFSNMNWTILTPDVCVAWNGERLWV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCEEEE
SEGADPADAPSEDAQEALWRTYYASIFNPARLNPRQMRQEMPKRYWRNLPEAALIPGLIE
ECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
AAQDRAAAMVTTPPRPPSERVLKAAQRHARDAPYNAGAPTTLDAVRAGVSVCRRCDLWRE
HHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ATQGVPGDGAPSAPLMFVGEQPGDQEDLAGSPLVGPAGQIFDRALAEVSVRREQTYVTNA
HHCCCCCCCCCCCCEEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VKHFKHELNGKRRLHKTPTQGEVSACRWWLDAERRLVRPTVIVMLGATAAFGVMGRPTPV
HHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHEEEEHHHHHHCCCCCCCCC
RETRGRPLPLPDGVQGLVTFHPSYLLRLPDAAARENAYRSFVDDLRLAGRLAGLAATSP
HHCCCCCCCCCCCCCHHHHCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA