Click here to switch to the map view.

The map label for this gene is frc [H]

Identifier: 16126564

GI number: 16126564

Start: 2527976

End: 2529166

Strand: Direct

Name: frc [H]

Synonym: CC_2325

Alternate gene names: 16126564

Gene position: 2527976-2529166 (Clockwise)

Preceding gene: 16126563

Following gene: 16126566

Centisome position: 62.93

GC content: 68.68

Gene sequence:

>1191_bases
ATGCTGGAAGGCCTGCGCGTCGTTGAACTGGCGACCTACATCGCCGCCCCGGGCGCCGCCGGCGTGATGGCCGATTGGGG
CGCGGACGTGATTAAGGTCGAGTCGCCCGAGGGCGACCCGATGCGGCGGTTCTTCGACACCATCGGCTCGGACCAGGACG
CCAATCCCGTCTTCGAACTCGACAATCGCGGCAAGCGGGCCGTTGTGCTGGATATCCGCAGCGATCTGGGGCGCGAGGCG
CTGAAGGCCTTGGTGGCCACCGCCGATATCTTCTTGACCAATGTGCGATCCGCGGCCCTGGCTCGGGCCGGCCTGGACTA
TGAAGCGCTCAAGGCCGTCAATCCGCGCCTGATCTACTGCAGCCTTTCGGGCTATGGCCTGACCGGTCCGGACGCCGACA
AACCGGGGATGGACGTCGCCGCCTTCTGGTCCCGTGCGGGCGTGGGCGCGATCACCGCGCCCAAGGGAACCGAGCCCTTT
CCGATCCGGACAGGCATGGGTGACCATGTGACCTCTCTGGCGACCGTGTCAGCCATCCTGGCGGCGGTTCACGAGCGTAC
CCGGACCGGCGTCGGTCGACTGGTGGAGACCTCGCTGCTGCGCACCGGCGTCTATGCGATCGGTTCGGACATGGCGATCC
AGCTCCGGTTCGGGAAACTGGCTTCCACGCGCGGCCGTCGCGAAGCCGTGCAGCCCTTGGCCAATTTCTACAAAACCTCC
GACGGCCGCTGGATCTGCTTGCTGCCGCGTCAGGGCTCAGTCGACTGGCCGCAGATCGCCGCCGCCGCCGGACGGCCTGA
ACTGGTCGACGATCCGCGCTTCGCCACCGCAAAGGCTCGGCGCGAACATGGCCAGGCGCTGGTCGATATCTTCGACGAGG
CCTTCGGGTCGATGACCTATGACGCCGCCGCCGCTGCGCTCGACGCGGGAGACATCACCTGGGCGCCCTATCAGACGCCG
CGCGAACTGGCGCTGGACGCCCAGGCCGAGGCGGCCGGCTGCTTCGTCGACACGCCGGACGGCGCGGGCGGGACCTTCAA
GGCGCCGGCGGCGCCGGCCCGTTTCCCTGGCGCGCCAAACGGTCCGCGCGGCCCTGCGCCCAAGCTCGGCGCGGACACGG
CGGCGGTGTTCCGGGAACTGGGATTTTCAGAAGATCAGGTGGCGGCCCTGACCAGGGTCAGCGCTGCTTGA

Upstream 100 bases:

>100_bases
CCTAAACTTTTGAAACAACGCCCTTTCCGCAGAGTAAGCCTTCCCTCGGCAAGCCCCCTCGCCCATCCTCGTAAGCAACG
AGAACATATGGGAGGGAGCG

Downstream 100 bases:

>100_bases
CCTTGTCATTGGCCTCGGCGAGCACACGCAGCATCTCGGCTGAGAACATCGAGCTGGCGATGCGTTGCCCGGCGCCCATG
CCGCCGCCGCTGTCGCCGAA

Product: fatty acid-CoA racemase

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MLEGLRVVELATYIAAPGAAGVMADWGADVIKVESPEGDPMRRFFDTIGSDQDANPVFELDNRGKRAVVLDIRSDLGREA
LKALVATADIFLTNVRSAALARAGLDYEALKAVNPRLIYCSLSGYGLTGPDADKPGMDVAAFWSRAGVGAITAPKGTEPF
PIRTGMGDHVTSLATVSAILAAVHERTRTGVGRLVETSLLRTGVYAIGSDMAIQLRFGKLASTRGRREAVQPLANFYKTS
DGRWICLLPRQGSVDWPQIAAAAGRPELVDDPRFATAKARREHGQALVDIFDEAFGSMTYDAAAAALDAGDITWAPYQTP
RELALDAQAEAAGCFVDTPDGAGGTFKAPAAPARFPGAPNGPRGPAPKLGADTAAVFRELGFSEDQVAALTRVSAA

Sequences:

>Translated_396_residues
MLEGLRVVELATYIAAPGAAGVMADWGADVIKVESPEGDPMRRFFDTIGSDQDANPVFELDNRGKRAVVLDIRSDLGREA
LKALVATADIFLTNVRSAALARAGLDYEALKAVNPRLIYCSLSGYGLTGPDADKPGMDVAAFWSRAGVGAITAPKGTEPF
PIRTGMGDHVTSLATVSAILAAVHERTRTGVGRLVETSLLRTGVYAIGSDMAIQLRFGKLASTRGRREAVQPLANFYKTS
DGRWICLLPRQGSVDWPQIAAAAGRPELVDDPRFATAKARREHGQALVDIFDEAFGSMTYDAAAAALDAGDITWAPYQTP
RELALDAQAEAAGCFVDTPDGAGGTFKAPAAPARFPGAPNGPRGPAPKLGADTAAVFRELGFSEDQVAALTRVSAA
>Mature_396_residues
MLEGLRVVELATYIAAPGAAGVMADWGADVIKVESPEGDPMRRFFDTIGSDQDANPVFELDNRGKRAVVLDIRSDLGREA
LKALVATADIFLTNVRSAALARAGLDYEALKAVNPRLIYCSLSGYGLTGPDADKPGMDVAAFWSRAGVGAITAPKGTEPF
PIRTGMGDHVTSLATVSAILAAVHERTRTGVGRLVETSLLRTGVYAIGSDMAIQLRFGKLASTRGRREAVQPLANFYKTS
DGRWICLLPRQGSVDWPQIAAAAGRPELVDDPRFATAKARREHGQALVDIFDEAFGSMTYDAAAAALDAGDITWAPYQTP
RELALDAQAEAAGCFVDTPDGAGGTFKAPAAPARFPGAPNGPRGPAPKLGADTAAVFRELGFSEDQVAALTRVSAA

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=392, Percent_Identity=26.530612244898, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI300863124, Length=339, Percent_Identity=27.7286135693215, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI300863126, Length=390, Percent_Identity=24.8717948717949, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI42794625, Length=415, Percent_Identity=24.3373493975904, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI266456254, Length=415, Percent_Identity=24.3373493975904, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI266458397, Length=247, Percent_Identity=28.7449392712551, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI266458393, Length=247, Percent_Identity=28.7449392712551, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI13376042, Length=339, Percent_Identity=24.188790560472, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI42822893, Length=138, Percent_Identity=34.7826086956522, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI266458395, Length=138, Percent_Identity=34.7826086956522, Blast_Score=76, Evalue=6e-14,
Organism=Escherichia coli, GI1788717, Length=424, Percent_Identity=28.7735849056604, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI87082093, Length=359, Percent_Identity=25.0696378830084, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1786222, Length=407, Percent_Identity=27.027027027027, Blast_Score=96, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI115535051, Length=357, Percent_Identity=23.5294117647059, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI32564160, Length=202, Percent_Identity=28.2178217821782, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24648431, Length=394, Percent_Identity=31.7258883248731, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI24585488, Length=368, Percent_Identity=24.1847826086957, Blast_Score=82, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 41688; Mature: 41688

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEGLRVVELATYIAAPGAAGVMADWGADVIKVESPEGDPMRRFFDTIGSDQDANPVFEL
CCCCHHHHHHHHHHHCCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEE
DNRGKRAVVLDIRSDLGREALKALVATADIFLTNVRSAALARAGLDYEALKAVNPRLIYC
CCCCCEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEE
SLSGYGLTGPDADKPGMDVAAFWSRAGVGAITAPKGTEPFPIRTGMGDHVTSLATVSAIL
ECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCEECCCCHHHHHHHHHHHHH
AAVHERTRTGVGRLVETSLLRTGVYAIGSDMAIQLRFGKLASTRGRREAVQPLANFYKTS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHCCCHHHHHHHHHHHHCCC
DGRWICLLPRQGSVDWPQIAAAAGRPELVDDPRFATAKARREHGQALVDIFDEAFGSMTY
CCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
DAAAAALDAGDITWAPYQTPRELALDAQAEAAGCFVDTPDGAGGTFKAPAAPARFPGAPN
HHHHHHCCCCCEEECCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
GPRGPAPKLGADTAAVFRELGFSEDQVAALTRVSAA
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MLEGLRVVELATYIAAPGAAGVMADWGADVIKVESPEGDPMRRFFDTIGSDQDANPVFEL
CCCCHHHHHHHHHHHCCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCEEE
DNRGKRAVVLDIRSDLGREALKALVATADIFLTNVRSAALARAGLDYEALKAVNPRLIYC
CCCCCEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEE
SLSGYGLTGPDADKPGMDVAAFWSRAGVGAITAPKGTEPFPIRTGMGDHVTSLATVSAIL
ECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCEECCCCHHHHHHHHHHHHH
AAVHERTRTGVGRLVETSLLRTGVYAIGSDMAIQLRFGKLASTRGRREAVQPLANFYKTS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHCCCHHHHHHHHHHHHCCC
DGRWICLLPRQGSVDWPQIAAAAGRPELVDDPRFATAKARREHGQALVDIFDEAFGSMTY
CCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
DAAAAALDAGDITWAPYQTPRELALDAQAEAAGCFVDTPDGAGGTFKAPAAPARFPGAPN
HHHHHHCCCCCEEECCCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
GPRGPAPKLGADTAAVFRELGFSEDQVAALTRVSAA
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA