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The map label for this gene is 16126490

Identifier: 16126490

GI number: 16126490

Start: 2449560

End: 2449955

Strand: Direct

Name: 16126490

Synonym: CC_2251

Alternate gene names: NA

Gene position: 2449560-2449955 (Clockwise)

Preceding gene: 16126488

Following gene: 16126491

Centisome position: 60.98

GC content: 66.67

Gene sequence:

>396_bases
ATGGCTTCCATGGGCAACGACATCGACGTTCACCTGGGCAAGCGCCTGCGTCGCCGCCGTCGTCTGCTGGGTCTCACCCA
GCAGCAACTGGCCGGCACGGTCGGCGTGCGCTTTCAGCAGATCCAAAAGTATGAGTGCGGCGCCAACCGCATCTCGGCCG
CGCGGCTGTGGCAGCTGTCCGAAGCGCTCGAGGTTCCGGTCGGCTACTTCTACGACGGCCTGTCTGACACCCGTCGCGAG
ACGACCAGCGAGTCGGCGGAAGGCGGCGAGATGTTCGCCCGCAAGGAAACCTTGGACCTGATCCGGGCCTACTACCTGCT
TGGCGAGCGTCCGCGCCGTCGTCTGCTGGACCTGGCCAAGTCGCTGAACGGCGGCGCCGAGCACGCCGACGCCTAA

Upstream 100 bases:

>100_bases
TCGCGCACGCCTCGCGCAACGGAGTCTCGCCCGGCACGCGACTTGCGGCTGCCAAGCCAGACCGTTCCGTTTCGGGACGG
GTCGGGAGAAACAAGGGGGC

Downstream 100 bases:

>100_bases
AGTCGACCACCGCGTACAGTCACTGGTAGCGTACCTGCGGCGGGGAGGTTAAATCCCCGCCCATGACGCTTTCCGCTGAT
CGGCTCGCGGCGCTCGACGC

Product: Cro/CI family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MASMGNDIDVHLGKRLRRRRRLLGLTQQQLAGTVGVRFQQIQKYECGANRISAARLWQLSEALEVPVGYFYDGLSDTRRE
TTSESAEGGEMFARKETLDLIRAYYLLGERPRRRLLDLAKSLNGGAEHADA

Sequences:

>Translated_131_residues
MASMGNDIDVHLGKRLRRRRRLLGLTQQQLAGTVGVRFQQIQKYECGANRISAARLWQLSEALEVPVGYFYDGLSDTRRE
TTSESAEGGEMFARKETLDLIRAYYLLGERPRRRLLDLAKSLNGGAEHADA
>Mature_130_residues
ASMGNDIDVHLGKRLRRRRRLLGLTQQQLAGTVGVRFQQIQKYECGANRISAARLWQLSEALEVPVGYFYDGLSDTRRET
TSESAEGGEMFARKETLDLIRAYYLLGERPRRRLLDLAKSLNGGAEHADA

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 14798; Mature: 14667

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASMGNDIDVHLGKRLRRRRRLLGLTQQQLAGTVGVRFQQIQKYECGANRISAARLWQLS
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EALEVPVGYFYDGLSDTRRETTSESAEGGEMFARKETLDLIRAYYLLGERPRRRLLDLAK
HHHHCCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SLNGGAEHADA
HCCCCCCCCCC
>Mature Secondary Structure 
ASMGNDIDVHLGKRLRRRRRLLGLTQQQLAGTVGVRFQQIQKYECGANRISAARLWQLS
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EALEVPVGYFYDGLSDTRRETTSESAEGGEMFARKETLDLIRAYYLLGERPRRRLLDLAK
HHHHCCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SLNGGAEHADA
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]