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The map label for this gene is ygeA [C]

Identifier: 16126276

GI number: 16126276

Start: 2236575

End: 2237243

Strand: Direct

Name: ygeA [C]

Synonym: CC_2033

Alternate gene names: 16126276

Gene position: 2236575-2237243 (Clockwise)

Preceding gene: 16126275

Following gene: 16126278

Centisome position: 55.68

GC content: 68.31

Gene sequence:

>669_bases
ATGAGCAAGGTTCTTGGCGTCCTGGGGGGCATGGGCCCCGCCGCCACGCTGGACTTTCTGGCCAAACTGCAAGCCGCGAC
GCCGGTGACCCGCGAGCAGGACCATTTGCGGGTGTTGGTGGACATCAACCCCAAGGTTCCCGACCGCAACGTCGAAGACT
CAGACCCCGGTCCGGTGCTGGCGGCGATGGCGGCGGGCCTTCGGGACTCCGGCGCCCAGGTGCTGGCGATCGCGTGCAAT
ACCGCGCACGCCTATGCCGAGGATGTGCGCGCCTCTGGCCTGCCGCTGATCGATATACTGGAGACAGCCGGTCTGGCCGC
TCGCGCCCAAGGAGCCAGTGTCGTCGGCGTGCTGGGCACCAGTCTGGCGCTTGGGCTCTATCGCGACCGCTTTACGGCGT
TGGGGCTGGAGGTCGTGACGCTGGACGATCATGAGCAGGTGGAGTTCATGGCCCTGCTCTACCGGATCAAGCGGGGCGAC
GTTGGACGAGCGTCGCAGGACGCCATGGCCGCCCTCGCCCGCCGCCTGATCGACAAGGGCGCGCAGGCCGTCGTGGCGGG
ATGCACCGAGGTCCCCCTCGTACTCGCGCGCGATGATCTCTCAGCGCCGTTCCTGGACGCCACCCAAACCCTGGCGGCGC
GCTGTGTCGAGGTTTGCCTGGCCGGCTAG

Upstream 100 bases:

>100_bases
TCAAGGGCGAGCGGGTCGTCTTCCTGCACACCGGCGGCGCCCAGGGCCTGTTCGGCTATCAGACGGTGCTCGAGCCGGCG
CTGGGATAGGGGTCTCGTCG

Downstream 100 bases:

>100_bases
CGGATCGAGCCCGTCTGGTTTAGAGCCTCTCAGACCAGATGAAAGGGCTTTAAGATCAGATATTTAGATTTCGATCGGGC
GGGTTAGCCGCGTCCACTCG

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSKVLGVLGGMGPAATLDFLAKLQAATPVTREQDHLRVLVDINPKVPDRNVEDSDPGPVLAAMAAGLRDSGAQVLAIACN
TAHAYAEDVRASGLPLIDILETAGLAARAQGASVVGVLGTSLALGLYRDRFTALGLEVVTLDDHEQVEFMALLYRIKRGD
VGRASQDAMAALARRLIDKGAQAVVAGCTEVPLVLARDDLSAPFLDATQTLAARCVEVCLAG

Sequences:

>Translated_222_residues
MSKVLGVLGGMGPAATLDFLAKLQAATPVTREQDHLRVLVDINPKVPDRNVEDSDPGPVLAAMAAGLRDSGAQVLAIACN
TAHAYAEDVRASGLPLIDILETAGLAARAQGASVVGVLGTSLALGLYRDRFTALGLEVVTLDDHEQVEFMALLYRIKRGD
VGRASQDAMAALARRLIDKGAQAVVAGCTEVPLVLARDDLSAPFLDATQTLAARCVEVCLAG
>Mature_221_residues
SKVLGVLGGMGPAATLDFLAKLQAATPVTREQDHLRVLVDINPKVPDRNVEDSDPGPVLAAMAAGLRDSGAQVLAIACNT
AHAYAEDVRASGLPLIDILETAGLAARAQGASVVGVLGTSLALGLYRDRFTALGLEVVTLDDHEQVEFMALLYRIKRGDV
GRASQDAMAALARRLIDKGAQAVVAGCTEVPLVLARDDLSAPFLDATQTLAARCVEVCLAG

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=220, Percent_Identity=25.9090909090909, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.13 [H]

Molecular weight: Translated: 23096; Mature: 22965

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVLGVLGGMGPAATLDFLAKLQAATPVTREQDHLRVLVDINPKVPDRNVEDSDPGPVL
CCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH
AAMAAGLRDSGAQVLAIACNTAHAYAEDVRASGLPLIDILETAGLAARAQGASVVGVLGT
HHHHHCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCCCHHHHHHH
SLALGLYRDRFTALGLEVVTLDDHEQVEFMALLYRIKRGDVGRASQDAMAALARRLIDKG
HHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
AQAVVAGCTEVPLVLARDDLSAPFLDATQTLAARCVEVCLAG
CHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKVLGVLGGMGPAATLDFLAKLQAATPVTREQDHLRVLVDINPKVPDRNVEDSDPGPVL
CHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHH
AAMAAGLRDSGAQVLAIACNTAHAYAEDVRASGLPLIDILETAGLAARAQGASVVGVLGT
HHHHHCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCCCHHHHHHH
SLALGLYRDRFTALGLEVVTLDDHEQVEFMALLYRIKRGDVGRASQDAMAALARRLIDKG
HHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
AQAVVAGCTEVPLVLARDDLSAPFLDATQTLAARCVEVCLAG
CHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2054383; 1907199 [H]