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The map label for this gene is dcyD [H]

Identifier: 16126275

GI number: 16126275

Start: 2235562

End: 2236563

Strand: Direct

Name: dcyD [H]

Synonym: CC_2032

Alternate gene names: 16126275

Gene position: 2235562-2236563 (Clockwise)

Preceding gene: 16126266

Following gene: 16126276

Centisome position: 55.65

GC content: 69.06

Gene sequence:

>1002_bases
ATGCATCTCGCTCGCTTTCCTCGCGCCCGCTTCGCCCACCTGCCCACGCCCCTGGAACCCATGCCGCGCCTCGGCGCGGA
GCTGGGGATCGACCTCTGGGTCAAGCGCGACGACTGCACCGGCCTGGCCGGCGGCGGCAACAAGACCCGCAAGCTGGAGT
TCCTCCTCGGCGAGGCCCTGATCCAGGGCGCCGACACCCTGGTGACCCAGGGCGCGGTTCAGTCCAATCACGTGCGCCAG
ACCATCGCTGCCGGCGCGCGCTTTGGCCTCAAGACCGAGGTGATCCTCGAAGAGCGCACCGGCTCCAAGGCCAGCGACTA
TATGGGCAACGGCAACGTGCTGCTCGACAAGCTGATGGGCGCGTCGCTGCGCTATGTGCCGGGCGGCACGGACATGGTCG
CCGAGCTCGACAGCACTGCGGAGAACGTTCGTCAGCGCGGGGGTAAGCCCTACGTGATCCCCGGCGGCGGCTCGAACACG
GTGGGCGCGCTCGGCTATGTCGATTGCGCGCGCGAGCTCGTCGTCCAGGCCGACCAGATGGACTTGAAGATCGATCGCCT
GGTCACGGCGACCGGCAGCGCCGGCACGCACGCCGGCCTGGTCGCCGGCTTCGCCGCGCTGTCCGTCGATATCCCGATCC
TGGGCTTCGGCGTCCGCGCGCCCAAGCCCAAGCAGGAAGAGAACGTCTATAACCTTGCCGTCGCCACGGCCGAGACGATC
GGCGCTGGTGGCCGGGTCAGGCGCGAAGCGGTCGTCGCCGACTGCGACTATGTCGGTGAGGGCTACGGCCTCGTGGACCA
AGGCGTGATCGACGCGCTGGCCCTGGCCGCCCGCACCGAAGGTCTGCTGCTGGATCCCGTCTATTCGGGCAAGGCGATGA
AGGGGCTGATCGACCAGGCCCGCAAAGGCGCGTTCAAGGGCGAGCGGGTCGTCTTCCTGCACACCGGCGGCGCCCAGGGC
CTGTTCGGCTATCAGACGGTGCTCGAGCCGGCGCTGGGATAG

Upstream 100 bases:

>100_bases
TGCAGGTCCGCCACAAACCCGCACTGGGCGAGGAGCGTCCGGTCCAACACGGCGGCGCAGGCCGTGCTAACAGATGGTGA
GTCTCTCAGGATCTGCGCCC

Downstream 100 bases:

>100_bases
GGGTCTCGTCGATGAGCAAGGTTCTTGGCGTCCTGGGGGGCATGGGCCCCGCCGCCACGCTGGACTTTCTGGCCAAACTG
CAAGCCGCGACGCCGGTGAC

Product: D-cysteine desulfhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MHLARFPRARFAHLPTPLEPMPRLGAELGIDLWVKRDDCTGLAGGGNKTRKLEFLLGEALIQGADTLVTQGAVQSNHVRQ
TIAAGARFGLKTEVILEERTGSKASDYMGNGNVLLDKLMGASLRYVPGGTDMVAELDSTAENVRQRGGKPYVIPGGGSNT
VGALGYVDCARELVVQADQMDLKIDRLVTATGSAGTHAGLVAGFAALSVDIPILGFGVRAPKPKQEENVYNLAVATAETI
GAGGRVRREAVVADCDYVGEGYGLVDQGVIDALALAARTEGLLLDPVYSGKAMKGLIDQARKGAFKGERVVFLHTGGAQG
LFGYQTVLEPALG

Sequences:

>Translated_333_residues
MHLARFPRARFAHLPTPLEPMPRLGAELGIDLWVKRDDCTGLAGGGNKTRKLEFLLGEALIQGADTLVTQGAVQSNHVRQ
TIAAGARFGLKTEVILEERTGSKASDYMGNGNVLLDKLMGASLRYVPGGTDMVAELDSTAENVRQRGGKPYVIPGGGSNT
VGALGYVDCARELVVQADQMDLKIDRLVTATGSAGTHAGLVAGFAALSVDIPILGFGVRAPKPKQEENVYNLAVATAETI
GAGGRVRREAVVADCDYVGEGYGLVDQGVIDALALAARTEGLLLDPVYSGKAMKGLIDQARKGAFKGERVVFLHTGGAQG
LFGYQTVLEPALG
>Mature_333_residues
MHLARFPRARFAHLPTPLEPMPRLGAELGIDLWVKRDDCTGLAGGGNKTRKLEFLLGEALIQGADTLVTQGAVQSNHVRQ
TIAAGARFGLKTEVILEERTGSKASDYMGNGNVLLDKLMGASLRYVPGGTDMVAELDSTAENVRQRGGKPYVIPGGGSNT
VGALGYVDCARELVVQADQMDLKIDRLVTATGSAGTHAGLVAGFAALSVDIPILGFGVRAPKPKQEENVYNLAVATAETI
GAGGRVRREAVVADCDYVGEGYGLVDQGVIDALALAARTEGLLLDPVYSGKAMKGLIDQARKGAFKGERVVFLHTGGAQG
LFGYQTVLEPALG

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=325, Percent_Identity=46.1538461538462, Blast_Score=262, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 34958; Mature: 34958

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLARFPRARFAHLPTPLEPMPRLGAELGIDLWVKRDDCTGLAGGGNKTRKLEFLLGEAL
CCCCCCCCHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHH
IQGADTLVTQGAVQSNHVRQTIAAGARFGLKTEVILEERTGSKASDYMGNGNVLLDKLMG
HHCHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCCCHHHHHHC
ASLRYVPGGTDMVAELDSTAENVRQRGGKPYVIPGGGSNTVGALGYVDCARELVVQADQM
CCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
DLKIDRLVTATGSAGTHAGLVAGFAALSVDIPILGFGVRAPKPKQEENVYNLAVATAETI
CEEEEHEEEECCCCCCHHHHHHHHHHHEECCEEEEECCCCCCCCCCCCEEEEEEEHHHHH
GAGGRVRREAVVADCDYVGEGYGLVDQGVIDALALAARTEGLLLDPVYSGKAMKGLIDQA
CCCCCEEHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHH
RKGAFKGERVVFLHTGGAQGLFGYQTVLEPALG
HHCCCCCCEEEEEECCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MHLARFPRARFAHLPTPLEPMPRLGAELGIDLWVKRDDCTGLAGGGNKTRKLEFLLGEAL
CCCCCCCCHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCEECCCCCCCHHHHHHHHHHH
IQGADTLVTQGAVQSNHVRQTIAAGARFGLKTEVILEERTGSKASDYMGNGNVLLDKLMG
HHCHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCCCHHHHHHC
ASLRYVPGGTDMVAELDSTAENVRQRGGKPYVIPGGGSNTVGALGYVDCARELVVQADQM
CCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
DLKIDRLVTATGSAGTHAGLVAGFAALSVDIPILGFGVRAPKPKQEENVYNLAVATAETI
CEEEEHEEEECCCCCCHHHHHHHHHHHEECCEEEEECCCCCCCCCCCCEEEEEEEHHHHH
GAGGRVRREAVVADCDYVGEGYGLVDQGVIDALALAARTEGLLLDPVYSGKAMKGLIDQA
CCCCCEEHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHH
RKGAFKGERVVFLHTGGAQGLFGYQTVLEPALG
HHCCCCCCEEEEEECCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA