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The map label for this gene is yfmJ [H]

Identifier: 16126259

GI number: 16126259

Start: 2217785

End: 2218810

Strand: Direct

Name: yfmJ [H]

Synonym: CC_2016

Alternate gene names: 16126259

Gene position: 2217785-2218810 (Clockwise)

Preceding gene: 16126257

Following gene: 16126261

Centisome position: 55.21

GC content: 65.2

Gene sequence:

>1026_bases
ATGACCACCTCGCGCGAGATCCGCCTGAAAGCCCGTCCCGTCGGCATGCCGAAGGATTCCGACTTCGAGCTGGCCACTGT
CGAGTTGCCCGCCCCCGGCGACGGCGAGATCCAGGTCAAGAACCTGTGGATGTCGGTCGACCCCTACATGCGCGGCCGCA
TGTATGACCGTCCCAGCTACGTCCCGCCCTTCCAACTGGGTGAAGCCCTGCAGGGCGGCGCGATCGGCGAGGTGATCGCC
TCCAACGACCCGGACTTCAAGCCGGGTGACATCGTCAGCTCGATGTTCGGCTGGCGCGAGGCCTACAACGCCCATCCCAA
GTCGCTGGCCGCCGCCGGCATGGGCGCCATCACCAAGATCGAGACCCACGGCATCCCGCCCCAGGCGTTTCTGGGCGTGG
CCGGCATGCCGGGCATGACCGCCTATGCAGGCCTTCTGCGCGTCGCGGCGCTGAAGGACGGCGATGTGGTGTTCGTGTCG
GCCGCCGCCGGCGCCGTCGGTTCGATCGTCTGCCAGATCGCCAAGCTGAAGGGCCACACGGTGATCGGTTCGGCCGGCGG
CCCCGAAAAGGTGGCGTTCCTGAAGTCGATCGGCGTCGACCACGTGATCGACTACAAGGCCACCCCCGACGTGGTCGCCG
AACTGGCCAAGGTCGCGCCCAAGGGTATCGACGTCTATTTCGAGAACGTCGGCGGCGTGCACCTGGAAGCGGCCATCAAC
TCGGCCCGCCCGTTCGCCCGTTTCGCGCTGTGCGGCATGATCTCGCAATACAACGAGACCAGTAAGCCGGAAGGCCCGTC
GAACATCATCCTGGCCGTCGGCAAGAGCCTGCGCCTGGAGGGCTTCATCGTCTCCAACCACTTCGACCTTTATCCGCAGT
TCGCCAAGGACATGGCCGAATGGATCAAGGCCGGGAAGATCACCTGGAAGGAAACGGTCGAGGACGGCGTCGATCGGGCG
CCGAACGCGTTCCTGAAGCTCTTCACCGGTGAGAACCTCGGCAAGATGCTGGTCAAGCTGGGCTAA

Upstream 100 bases:

>100_bases
CTTCGAGGCCGCTTAGAAGCACTGGTGACTTGCGTAAGGGCGCGCTAAACAGTCGTTTAAATTTGCAACACTTGGCCAAG
CCAAGGCAGGGAGGACCCCC

Downstream 100 bases:

>100_bases
CGCTCATTTCGGCAGGTCTCCCCCCTCGGCGAGGCCAACCATACTTTACAAACCGGACGGGCGGCTGGATCACCAGCCGC
CCGTTCTTGTTGAGGGCTGC

Product: zinc-containing alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MTTSREIRLKARPVGMPKDSDFELATVELPAPGDGEIQVKNLWMSVDPYMRGRMYDRPSYVPPFQLGEALQGGAIGEVIA
SNDPDFKPGDIVSSMFGWREAYNAHPKSLAAAGMGAITKIETHGIPPQAFLGVAGMPGMTAYAGLLRVAALKDGDVVFVS
AAAGAVGSIVCQIAKLKGHTVIGSAGGPEKVAFLKSIGVDHVIDYKATPDVVAELAKVAPKGIDVYFENVGGVHLEAAIN
SARPFARFALCGMISQYNETSKPEGPSNIILAVGKSLRLEGFIVSNHFDLYPQFAKDMAEWIKAGKITWKETVEDGVDRA
PNAFLKLFTGENLGKMLVKLG

Sequences:

>Translated_341_residues
MTTSREIRLKARPVGMPKDSDFELATVELPAPGDGEIQVKNLWMSVDPYMRGRMYDRPSYVPPFQLGEALQGGAIGEVIA
SNDPDFKPGDIVSSMFGWREAYNAHPKSLAAAGMGAITKIETHGIPPQAFLGVAGMPGMTAYAGLLRVAALKDGDVVFVS
AAAGAVGSIVCQIAKLKGHTVIGSAGGPEKVAFLKSIGVDHVIDYKATPDVVAELAKVAPKGIDVYFENVGGVHLEAAIN
SARPFARFALCGMISQYNETSKPEGPSNIILAVGKSLRLEGFIVSNHFDLYPQFAKDMAEWIKAGKITWKETVEDGVDRA
PNAFLKLFTGENLGKMLVKLG
>Mature_340_residues
TTSREIRLKARPVGMPKDSDFELATVELPAPGDGEIQVKNLWMSVDPYMRGRMYDRPSYVPPFQLGEALQGGAIGEVIAS
NDPDFKPGDIVSSMFGWREAYNAHPKSLAAAGMGAITKIETHGIPPQAFLGVAGMPGMTAYAGLLRVAALKDGDVVFVSA
AAGAVGSIVCQIAKLKGHTVIGSAGGPEKVAFLKSIGVDHVIDYKATPDVVAELAKVAPKGIDVYFENVGGVHLEAAINS
ARPFARFALCGMISQYNETSKPEGPSNIILAVGKSLRLEGFIVSNHFDLYPQFAKDMAEWIKAGKITWKETVEDGVDRAP
NAFLKLFTGENLGKMLVKLG

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=343, Percent_Identity=38.1924198250729, Blast_Score=226, Evalue=2e-59,
Organism=Homo sapiens, GI226059133, Length=343, Percent_Identity=38.1924198250729, Blast_Score=226, Evalue=2e-59,
Organism=Homo sapiens, GI226056130, Length=306, Percent_Identity=37.5816993464052, Blast_Score=195, Evalue=5e-50,
Organism=Homo sapiens, GI226246682, Length=347, Percent_Identity=33.4293948126801, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI226246680, Length=347, Percent_Identity=33.4293948126801, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI22748929, Length=347, Percent_Identity=33.4293948126801, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI28557745, Length=334, Percent_Identity=30.5389221556886, Blast_Score=115, Evalue=4e-26,
Organism=Homo sapiens, GI18379349, Length=237, Percent_Identity=26.5822784810127, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI194239674, Length=216, Percent_Identity=28.7037037037037, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI13236495, Length=216, Percent_Identity=28.7037037037037, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI226510941, Length=343, Percent_Identity=38.7755102040816, Blast_Score=253, Evalue=2e-68,
Organism=Caenorhabditis elegans, GI133901712, Length=340, Percent_Identity=30.8823529411765, Blast_Score=153, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI133901710, Length=340, Percent_Identity=30.8823529411765, Blast_Score=153, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17507255, Length=118, Percent_Identity=31.3559322033898, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6323504, Length=341, Percent_Identity=33.1378299120235, Blast_Score=129, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36379; Mature: 36248

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSREIRLKARPVGMPKDSDFELATVELPAPGDGEIQVKNLWMSVDPYMRGRMYDRPSY
CCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCHHHCCCCCCCCCC
VPPFQLGEALQGGAIGEVIASNDPDFKPGDIVSSMFGWREAYNAHPKSLAAAGMGAITKI
CCCHHHHHHHCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEE
ETHGIPPQAFLGVAGMPGMTAYAGLLRVAALKDGDVVFVSAAAGAVGSIVCQIAKLKGHT
ECCCCCHHHHHCCCCCCCHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHHHCCCE
VIGSAGGPEKVAFLKSIGVDHVIDYKATPDVVAELAKVAPKGIDVYFENVGGVHLEAAIN
EEECCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEHHC
SARPFARFALCGMISQYNETSKPEGPSNIILAVGKSLRLEGFIVSNHFDLYPQFAKDMAE
CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCHHHHHHHHH
WIKAGKITWKETVEDGVDRAPNAFLKLFTGENLGKMLVKLG
HHHHCCCCHHHHHHHHHCCCCCHHEEEECCCCHHHHHHCCC
>Mature Secondary Structure 
TTSREIRLKARPVGMPKDSDFELATVELPAPGDGEIQVKNLWMSVDPYMRGRMYDRPSY
CCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCHHHCCCCCCCCCC
VPPFQLGEALQGGAIGEVIASNDPDFKPGDIVSSMFGWREAYNAHPKSLAAAGMGAITKI
CCCHHHHHHHCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEE
ETHGIPPQAFLGVAGMPGMTAYAGLLRVAALKDGDVVFVSAAAGAVGSIVCQIAKLKGHT
ECCCCCHHHHHCCCCCCCHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHHHCCCE
VIGSAGGPEKVAFLKSIGVDHVIDYKATPDVVAELAKVAPKGIDVYFENVGGVHLEAAIN
EEECCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEHHC
SARPFARFALCGMISQYNETSKPEGPSNIILAVGKSLRLEGFIVSNHFDLYPQFAKDMAE
CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCHHHHHHHHH
WIKAGKITWKETVEDGVDRAPNAFLKLFTGENLGKMLVKLG
HHHHCCCCHHHHHHHHHCCCCCHHEEEECCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]