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The map label for this gene is yfgC [C]

Identifier: 16126121

GI number: 16126121

Start: 2074232

End: 2075764

Strand: Direct

Name: yfgC [C]

Synonym: CC_1878

Alternate gene names: 16126121

Gene position: 2074232-2075764 (Clockwise)

Preceding gene: 16126120

Following gene: 16126122

Centisome position: 51.64

GC content: 64.51

Gene sequence:

>1533_bases
ATGCGCGGGCCGAATTCTTTCGCGGCGACGGTGCGAACCCTTGTTCCCTCGCCGTCACGATCCAAGTTAGATTGGTCAGG
GTTCGCGGGGGCGCGATCTGGAGATCACTTGATGACCTCGCGTAGTGGGCGAGCCGGTAAGAGATTGGGCGCGGCGATCT
GCGCGCTCGCCGTTCTCGCGTCCACCGTTTCGGCGCCCCAGCCTGCGAACGCGCAGAACGACGGTCCCTCTCTGATCCGG
GACACCGAGATCGAAGAGATCCTGCATCGCGACTCCGACCCGATCTTCGCCGCCGCCGGTCTGGACCCGAAGAACGTGCG
GATTCTTATCGTCGGCGACAAATCACTGAACGCCTTCGCAACCCAGGGCCTGCAGATGGGCCTGAATACGGGCCTGATCC
TGCAGACCGAGAACCCGAATCAGTTGCGCGGCGTCATTGCGCACGAGACGGGTCACCTTGCCGGCGGCCACCCCATCCGC
TCCGACGAGATGATGCGCGCAGGCCTCAAGCCGATGATCCTGACCATGGGTCTTGGCGTTCTGGCTGCTCTGGCGGGCGC
GCCGGACGCTGGCGCGGTGCTGATCGGCAACGCCCAGTACGCCGGGGCCCTCGGCGCGCTGGGCTACAGCCGTGAGCAGG
AATCGCGGGCCGACCAGGCCGGCGCCGGCTTCCTGGAAGCCACCGGCCAGTCCGGGCGGGGTCTCGTCGAGTTCTTCGAC
AATTTCCGCTATCAGGAAGTGTTCGATCAGGCGCGGCGGTTCGCCTATTTCCGCAGCCACCCCCTCTCGTCCGAAAGGAT
CGAGGTGCTGCGCAGCCGTGTCGAGCGCCTGCCGCACTACAACGCCGTCGATACGCCCGAGGATCTGGCCCGGCACGAGG
TGATGAAGGCCAAGCTTGAGGGCTTCCTCAACCCCCAGATCGCGCTGATGAAGTACAAGGAGACCGATACCGGGTTTCCG
GCCCGCTATGCGCGCTCGATCGCCTACTACCAGATGAAGGAGCCCGATCGGGCCCTGAAGCTGCTGGACGGCCTGATCGC
AGACCACCCCGATAATCCCTATCTCTGGGAGCTGAAGGGGCAGATCCTTTTTGAATTCAATCGTGTGGAACAGGCCGAAG
AGCCCCAGCGCCGCTCGGTGGCGCTGAAGCCGGACGCAGCGCTGCTCCGCATCAATCTGGGCCAGACCCTGATCAATCTG
AACGACCCTAAGAAGGTCGAGGAAGGCGTTCAGGAGCTGAAGCGCAGCCTGCTGAATGAGCCCGACAACCCGGTGACCTG
GCGCCTGCTGGCTCAAGCCTACGACAAGCAGAAGAAGGACGGCGAGGCTCGCCTGGCCACCGCCGAGCAATATTTCTCAT
TAGGCGCCGTGCGCGAGGCCAAGGTCTTTGCGATGCGCGCCCGTGAGCTCCTGACCAAGAACACGCCAGACTGGCGCCGC
GCCACGGACATCGTGCTGGCGTCCCGCCCCTCGAACCAGGAACTCAAGGACCTGGCTAAGGACGGCGTCATGCCCTCCAA
TCCCGGCCGCTGA

Upstream 100 bases:

>100_bases
GCCGAGCCGGATCCGAACGAGATCACCGCGCCGCCCGAAAAGCCCCGTCGGGGCTGGTGGCGCCGGTAAGGGCGAATGAC
AACGGCCCGCGCGTCTCCAG

Downstream 100 bases:

>100_bases
CCGGCCACGTATCCAGAGATTTCGATGACCATGCTTCGCCGCGCCGCGACCTTCGCCGTCCCATTGGCCATCGCCGGCCT
GACCCTCGCCGGCTGCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MRGPNSFAATVRTLVPSPSRSKLDWSGFAGARSGDHLMTSRSGRAGKRLGAAICALAVLASTVSAPQPANAQNDGPSLIR
DTEIEEILHRDSDPIFAAAGLDPKNVRILIVGDKSLNAFATQGLQMGLNTGLILQTENPNQLRGVIAHETGHLAGGHPIR
SDEMMRAGLKPMILTMGLGVLAALAGAPDAGAVLIGNAQYAGALGALGYSREQESRADQAGAGFLEATGQSGRGLVEFFD
NFRYQEVFDQARRFAYFRSHPLSSERIEVLRSRVERLPHYNAVDTPEDLARHEVMKAKLEGFLNPQIALMKYKETDTGFP
ARYARSIAYYQMKEPDRALKLLDGLIADHPDNPYLWELKGQILFEFNRVEQAEEPQRRSVALKPDAALLRINLGQTLINL
NDPKKVEEGVQELKRSLLNEPDNPVTWRLLAQAYDKQKKDGEARLATAEQYFSLGAVREAKVFAMRARELLTKNTPDWRR
ATDIVLASRPSNQELKDLAKDGVMPSNPGR

Sequences:

>Translated_510_residues
MRGPNSFAATVRTLVPSPSRSKLDWSGFAGARSGDHLMTSRSGRAGKRLGAAICALAVLASTVSAPQPANAQNDGPSLIR
DTEIEEILHRDSDPIFAAAGLDPKNVRILIVGDKSLNAFATQGLQMGLNTGLILQTENPNQLRGVIAHETGHLAGGHPIR
SDEMMRAGLKPMILTMGLGVLAALAGAPDAGAVLIGNAQYAGALGALGYSREQESRADQAGAGFLEATGQSGRGLVEFFD
NFRYQEVFDQARRFAYFRSHPLSSERIEVLRSRVERLPHYNAVDTPEDLARHEVMKAKLEGFLNPQIALMKYKETDTGFP
ARYARSIAYYQMKEPDRALKLLDGLIADHPDNPYLWELKGQILFEFNRVEQAEEPQRRSVALKPDAALLRINLGQTLINL
NDPKKVEEGVQELKRSLLNEPDNPVTWRLLAQAYDKQKKDGEARLATAEQYFSLGAVREAKVFAMRARELLTKNTPDWRR
ATDIVLASRPSNQELKDLAKDGVMPSNPGR
>Mature_510_residues
MRGPNSFAATVRTLVPSPSRSKLDWSGFAGARSGDHLMTSRSGRAGKRLGAAICALAVLASTVSAPQPANAQNDGPSLIR
DTEIEEILHRDSDPIFAAAGLDPKNVRILIVGDKSLNAFATQGLQMGLNTGLILQTENPNQLRGVIAHETGHLAGGHPIR
SDEMMRAGLKPMILTMGLGVLAALAGAPDAGAVLIGNAQYAGALGALGYSREQESRADQAGAGFLEATGQSGRGLVEFFD
NFRYQEVFDQARRFAYFRSHPLSSERIEVLRSRVERLPHYNAVDTPEDLARHEVMKAKLEGFLNPQIALMKYKETDTGFP
ARYARSIAYYQMKEPDRALKLLDGLIADHPDNPYLWELKGQILFEFNRVEQAEEPQRRSVALKPDAALLRINLGQTLINL
NDPKKVEEGVQELKRSLLNEPDNPVTWRLLAQAYDKQKKDGEARLATAEQYFSLGAVREAKVFAMRARELLTKNTPDWRR
ATDIVLASRPSNQELKDLAKDGVMPSNPGR

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=338, Percent_Identity=24.5562130177515, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 56040; Mature: 56040

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGPNSFAATVRTLVPSPSRSKLDWSGFAGARSGDHLMTSRSGRAGKRLGAAICALAVLA
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHH
STVSAPQPANAQNDGPSLIRDTEIEEILHRDSDPIFAAAGLDPKNVRILIVGDKSLNAFA
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCHHHH
TQGLQMGLNTGLILQTENPNQLRGVIAHETGHLAGGHPIRSDEMMRAGLKPMILTMGLGV
HHHHHHCCCCCEEEEECCCHHHHEEEEECCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH
LAALAGAPDAGAVLIGNAQYAGALGALGYSREQESRADQAGAGFLEATGQSGRGLVEFFD
HHHHHCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHH
NFRYQEVFDQARRFAYFRSHPLSSERIEVLRSRVERLPHYNAVDTPEDLARHEVMKAKLE
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
GFLNPQIALMKYKETDTGFPARYARSIAYYQMKEPDRALKLLDGLIADHPDNPYLWELKG
HCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECC
QILFEFNRVEQAEEPQRRSVALKPDAALLRINLGQTLINLNDPKKVEEGVQELKRSLLNE
EEEEEEHHHHHCCCHHHCCEEECCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHCC
PDNPVTWRLLAQAYDKQKKDGEARLATAEQYFSLGAVREAKVFAMRARELLTKNTPDWRR
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHH
ATDIVLASRPSNQELKDLAKDGVMPSNPGR
HHCEEEECCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRGPNSFAATVRTLVPSPSRSKLDWSGFAGARSGDHLMTSRSGRAGKRLGAAICALAVLA
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHH
STVSAPQPANAQNDGPSLIRDTEIEEILHRDSDPIFAAAGLDPKNVRILIVGDKSLNAFA
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEECCCCHHHH
TQGLQMGLNTGLILQTENPNQLRGVIAHETGHLAGGHPIRSDEMMRAGLKPMILTMGLGV
HHHHHHCCCCCEEEEECCCHHHHEEEEECCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH
LAALAGAPDAGAVLIGNAQYAGALGALGYSREQESRADQAGAGFLEATGQSGRGLVEFFD
HHHHHCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHH
NFRYQEVFDQARRFAYFRSHPLSSERIEVLRSRVERLPHYNAVDTPEDLARHEVMKAKLE
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
GFLNPQIALMKYKETDTGFPARYARSIAYYQMKEPDRALKLLDGLIADHPDNPYLWELKG
HCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECC
QILFEFNRVEQAEEPQRRSVALKPDAALLRINLGQTLINLNDPKKVEEGVQELKRSLLNE
EEEEEEHHHHHCCCHHHCCEEECCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHCC
PDNPVTWRLLAQAYDKQKKDGEARLATAEQYFSLGAVREAKVFAMRARELLTKNTPDWRR
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHH
ATDIVLASRPSNQELKDLAKDGVMPSNPGR
HHCEEEECCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]