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The map label for this gene is yngJ [H]

Identifier: 16126051

GI number: 16126051

Start: 1997254

End: 1998402

Strand: Direct

Name: yngJ [H]

Synonym: CC_1807

Alternate gene names: 16126051

Gene position: 1997254-1998402 (Clockwise)

Preceding gene: 16126050

Following gene: 16126054

Centisome position: 49.72

GC content: 69.89

Gene sequence:

>1149_bases
ATGAACTTCGACCTTTCCGAAGAGCAGCAGCTCCTGAAGGACAGCGCCAGGCGGTACGGCGCCGACCACGGCGACTTCAC
CGCCTGGCGGGCCCGCGTAGAGCGCGGCGAGGCCTATGACGCGGCCAGCTGGCGGCGCATGGCCGATCTGGGCTGGCTGA
TGCTGAACGTTCCCGAGGATGACGGCGGCCTGGGCGCGGGCCCGACGGAAACCATGGTCGTGGCCGAGGCTGTCGGTCGC
TACCTGATGCTGGTACCGTTCGTCTCGACCGGCGTGATCGCCCCGACGCTGCTGACCGCCGCGACCGAAGCGCTCCGCGC
CCACCTGATGGCCGGATTGGCTGAAGGCAAGCTGGTGATCAGCCTGGCCGACGCCGAACCGAACGGCCGCTTTGACCTCA
ACCGCATCGCCACCCGCGCGGAAGCCGTCGAGGGCGGTTTCCGGCTCACGGGCGCGAAGAGCCACGCTCTGGATGGCGGC
GCCGCCGACTGGTTCATCGTTCCCGCCCGCACGACCGCCGCCGACGATAGCCAGGACGGCGTCAGCCTGTTCCTGGTTCC
GGCAGAGATCGAGGGCCTCACGGTCATGCGCAGCCGCGCCATGGACAACCGCCACAACGCCAGCCTGAAGCTGGACGGCG
TGGTGGTTCCCGCCGCCAACCTGATCGGCGGCCTGGGCGAAGGCTTTCCGCTGCTGCGCGACGCCGTCGACCGCGGCGTC
GTGGCGCGCCTGGCCGAGGCGGTCGGCGCCATGGACGCCGTCCGCGAGATGACGATGGAGTATCTGAAGACCCGCAAGCA
GTTCGGCCAGACGCTAGGCGCCTTCCAGGCGCTGCAGCACCGCGCGGTCGACATGGCGATCGCCTGCGAGGAGGCCCGCT
CGATGATGTACCTGGCGACGCTCGCGCTCTCGGGCGCCCCCGTCGAACGTCGAAAGGTGATCGCGGCGGCCAAGGCGCGC
GTGGGCCAGACCAGCCTCTATGTCGGCCGTCAGGCTGTGCAACTGCACGGCGGTGTCGGCTTCACCGAAGAGCTGGCCGT
GGCCCACTACCTCAAGCGCCTGATCATGATCGACATGGCGTTCGGCAACGCCGACCATCACCGCGCCGAACTGGCGGCCA
GCCTGCGGCCCGGCGCCGTAGCGGCCTGA

Upstream 100 bases:

>100_bases
AAGGGGATGATCTATTCCCGAGTGACCAGCATCTACGGCGGCTCGAACGAAATCCAACGCAACATCATCGCCCGTCGGGC
GCTCGGTCTCTGAGGTCCCC

Downstream 100 bases:

>100_bases
ATCAAAAAGCGCGTCGGGGACGGTGTGATCCACCCCCGACGCGCCTTAATTCCGACTGTTCGTCTGGGCCGGATGACCTC
ATCCGGCCCAGAACCTTTTA

Product: acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MNFDLSEEQQLLKDSARRYGADHGDFTAWRARVERGEAYDAASWRRMADLGWLMLNVPEDDGGLGAGPTETMVVAEAVGR
YLMLVPFVSTGVIAPTLLTAATEALRAHLMAGLAEGKLVISLADAEPNGRFDLNRIATRAEAVEGGFRLTGAKSHALDGG
AADWFIVPARTTAADDSQDGVSLFLVPAEIEGLTVMRSRAMDNRHNASLKLDGVVVPAANLIGGLGEGFPLLRDAVDRGV
VARLAEAVGAMDAVREMTMEYLKTRKQFGQTLGAFQALQHRAVDMAIACEEARSMMYLATLALSGAPVERRKVIAAAKAR
VGQTSLYVGRQAVQLHGGVGFTEELAVAHYLKRLIMIDMAFGNADHHRAELAASLRPGAVAA

Sequences:

>Translated_382_residues
MNFDLSEEQQLLKDSARRYGADHGDFTAWRARVERGEAYDAASWRRMADLGWLMLNVPEDDGGLGAGPTETMVVAEAVGR
YLMLVPFVSTGVIAPTLLTAATEALRAHLMAGLAEGKLVISLADAEPNGRFDLNRIATRAEAVEGGFRLTGAKSHALDGG
AADWFIVPARTTAADDSQDGVSLFLVPAEIEGLTVMRSRAMDNRHNASLKLDGVVVPAANLIGGLGEGFPLLRDAVDRGV
VARLAEAVGAMDAVREMTMEYLKTRKQFGQTLGAFQALQHRAVDMAIACEEARSMMYLATLALSGAPVERRKVIAAAKAR
VGQTSLYVGRQAVQLHGGVGFTEELAVAHYLKRLIMIDMAFGNADHHRAELAASLRPGAVAA
>Mature_382_residues
MNFDLSEEQQLLKDSARRYGADHGDFTAWRARVERGEAYDAASWRRMADLGWLMLNVPEDDGGLGAGPTETMVVAEAVGR
YLMLVPFVSTGVIAPTLLTAATEALRAHLMAGLAEGKLVISLADAEPNGRFDLNRIATRAEAVEGGFRLTGAKSHALDGG
AADWFIVPARTTAADDSQDGVSLFLVPAEIEGLTVMRSRAMDNRHNASLKLDGVVVPAANLIGGLGEGFPLLRDAVDRGV
VARLAEAVGAMDAVREMTMEYLKTRKQFGQTLGAFQALQHRAVDMAIACEEARSMMYLATLALSGAPVERRKVIAAAKAR
VGQTSLYVGRQAVQLHGGVGFTEELAVAHYLKRLIMIDMAFGNADHHRAELAASLRPGAVAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=386, Percent_Identity=24.8704663212435, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI4557233, Length=386, Percent_Identity=25.1295336787565, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI226958414, Length=332, Percent_Identity=24.6987951807229, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI76496475, Length=382, Percent_Identity=25.3926701570681, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI4557235, Length=382, Percent_Identity=25.3926701570681, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI4557231, Length=380, Percent_Identity=24.4736842105263, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI187960098, Length=380, Percent_Identity=24.4736842105263, Blast_Score=99, Evalue=8e-21,
Organism=Homo sapiens, GI21361497, Length=331, Percent_Identity=25.9818731117825, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI7656849, Length=353, Percent_Identity=24.929178470255, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4501857, Length=352, Percent_Identity=25, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4501859, Length=357, Percent_Identity=23.5294117647059, Blast_Score=90, Evalue=4e-18,
Organism=Escherichia coli, GI87081958, Length=355, Percent_Identity=25.0704225352113, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI1786223, Length=372, Percent_Identity=26.0752688172043, Blast_Score=87, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17569725, Length=379, Percent_Identity=26.6490765171504, Blast_Score=111, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17570075, Length=393, Percent_Identity=25.9541984732824, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71985184, Length=320, Percent_Identity=27.5, Blast_Score=108, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17534899, Length=391, Percent_Identity=25.8312020460358, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17538396, Length=374, Percent_Identity=22.9946524064171, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17551932, Length=315, Percent_Identity=26.3492063492064, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=312, Percent_Identity=26.2820512820513, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17506239, Length=376, Percent_Identity=26.3297872340426, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17505929, Length=329, Percent_Identity=26.1398176291793, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71985192, Length=264, Percent_Identity=28.030303030303, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17533517, Length=315, Percent_Identity=23.8095238095238, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI71990804, Length=274, Percent_Identity=24.0875912408759, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI32563615, Length=235, Percent_Identity=27.6595744680851, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21356377, Length=377, Percent_Identity=24.4031830238727, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24646207, Length=374, Percent_Identity=25.1336898395722, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24660351, Length=380, Percent_Identity=26.8421052631579, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI21355753, Length=333, Percent_Identity=25.8258258258258, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24666513, Length=382, Percent_Identity=22.7748691099476, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI281363737, Length=379, Percent_Identity=23.4828496042216, Blast_Score=86, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40839; Mature: 40839

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFDLSEEQQLLKDSARRYGADHGDFTAWRARVERGEAYDAASWRRMADLGWLMLNVPED
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEECCCC
DGGLGAGPTETMVVAEAVGRYLMLVPFVSTGVIAPTLLTAATEALRAHLMAGLAEGKLVI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
SLADAEPNGRFDLNRIATRAEAVEGGFRLTGAKSHALDGGAADWFIVPARTTAADDSQDG
EEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCC
VSLFLVPAEIEGLTVMRSRAMDNRHNASLKLDGVVVPAANLIGGLGEGFPLLRDAVDRGV
EEEEEEECCCCCHHHHHHHHCCCCCCCCEEECEEEECHHHHHCCCCCCCHHHHHHHHHHH
VARLAEAVGAMDAVREMTMEYLKTRKQFGQTLGAFQALQHRAVDMAIACEEARSMMYLAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALSGAPVERRKVIAAAKARVGQTSLYVGRQAVQLHGGVGFTEELAVAHYLKRLIMIDMA
HHHCCCCHHHHHHHHHHHHHCCCHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHH
FGNADHHRAELAASLRPGAVAA
CCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNFDLSEEQQLLKDSARRYGADHGDFTAWRARVERGEAYDAASWRRMADLGWLMLNVPED
CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEECCCC
DGGLGAGPTETMVVAEAVGRYLMLVPFVSTGVIAPTLLTAATEALRAHLMAGLAEGKLVI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
SLADAEPNGRFDLNRIATRAEAVEGGFRLTGAKSHALDGGAADWFIVPARTTAADDSQDG
EEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCC
VSLFLVPAEIEGLTVMRSRAMDNRHNASLKLDGVVVPAANLIGGLGEGFPLLRDAVDRGV
EEEEEEECCCCCHHHHHHHHCCCCCCCCEEECEEEECHHHHHCCCCCCCHHHHHHHHHHH
VARLAEAVGAMDAVREMTMEYLKTRKQFGQTLGAFQALQHRAVDMAIACEEARSMMYLAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALSGAPVERRKVIAAAKARVGQTSLYVGRQAVQLHGGVGFTEELAVAHYLKRLIMIDMA
HHHCCCCHHHHHHHHHHHHHCCCHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHH
FGNADHHRAELAASLRPGAVAA
CCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]