| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is yhjE [C]
Identifier: 16126018
GI number: 16126018
Start: 1958016
End: 1959356
Strand: Direct
Name: yhjE [C]
Synonym: CC_1774
Alternate gene names: 16126018
Gene position: 1958016-1959356 (Clockwise)
Preceding gene: 16126009
Following gene: 16126019
Centisome position: 48.74
GC content: 67.26
Gene sequence:
>1341_bases ATGGCGAGCGAACTGGCGATCCCCAAATCCTCGGGCCTCGAGCGTGATGCGCGGCGCATGCACGCCGATGACAAGGGTGT GCGTCCCGGCGAAATCGCTCTGGGTGTGGTGATCGGCCGAACGTCGGAGTTCTTCGACTTCTTCGTCTACGCCATCGCCT CGGTGCTGGTGTTCCCACAGCTGGTGTTCCCGTTTGTCGACCGGCTGACCGGGGTGATGCTGGCCTTTGGCCTGTTCGCA TTGGCCTTCATCGCCCGTCCTTTCGGCTCGGTGATCTTCGGCGCGATCGACCAGCGCTACGGACGGGGCGTGAAGCTGAC AATCGCGCTCTTCCTGCTGGGCGGCTCCACCGCTGTCATCAGCATGCTGCCCAGCTTCGCCGCCGTCGGTCCGATCGCCA TCTGGGCCCTGGCCGCCTGCCGGATCGGCCAGGGGCTGGCCCTGGCGGGCGCCTGGGATGGCATGGCCTCCCTGCTGGCG CTCAATGCGCCCGAGAACAAGCGCGGCTGGTATGCGATGATCCCGCAACTGGGCGCGCCGTTCGGCTTCATGCTCGCCAG CGGCCTGTTCGCCTATTTCGTCGCCACCCTGGCGCCGGCCGATTTCCTCGACTGGGGCTGGCGTTACCCGTTCTTCGCCG CCTTCGCGATCAATGTCGTGGCGCTGTTCGCCCGGCTCCGCATTGTCGCCACCGAAGAGTTCGGGGCGCTGTTCGAGAAG CGCGAGCTACGGCCGACCCGAGTCGCCAGCTTGCTGCGCGCCGAAGGCGGCAATGTGCTGATCGGCGCGTTCGCACCGCT GGCGACCTTCGCCATGTTCCACCTCGTCACCGTATTTCCGCTGTCGTGGGTGGTGCTGCACGGTGATGCGCAGCAGGCGC TCAACTTCCTGCGCATTGAGCTGTTCGGCGCTTTGGTGGGCGTCGGCGGCATCCTGGCCTCGGGCTGGATCGCCGACCGG ATCACCCGACAGAATCAACTGGCGCTATCGGCGCTGCTGATCGGTGCGTTCAGCCTCCTGGCGCCGCGCCTGTTGGACGG CGGCGCAACGGGTCAGACGGCCTATGTGGTCATCGGCTTCGCGATTCTGGGCCTGTCCTTTGGTCAAGCCGCCGGCGCGG TGAGCTCGGGCTTCTCCAAGCGCTATCGCTACACCGGTGCGGCCCTGACCTCGGATCTCTCGTGGCTGATCGGCGCAGGC TTTGCGCCGCTGGCGGCGCTCGGGCTGGCCTCCCTCTGGGGGCTGCCGGCGATTGGGCTGTATCTCGCGTCGGGCGCCCT GGCGACGCTGCTGGCGCTGACCATCGACCGCACGCGTCGACGTCGTCAGGCGCACTGCTAA
Upstream 100 bases:
>100_bases TTGCCTATCGGTCTGGCCTCGTCGCATGCTCGCATCCAGATCGCCGACAAGGCGACATGCATCGACTGGGCGGAAACGAA AGACAAGGACAGGGCTGCTG
Downstream 100 bases:
>100_bases GCGCGCCTCAACCCATTCTGTATGCACGAATACATTCGTCGCATGCTGGAATCGATCTTGGCCCGCTTGGCCAGGAGCGT TACGAGACGCACGTGGACAA
Product: major facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MASELAIPKSSGLERDARRMHADDKGVRPGEIALGVVIGRTSEFFDFFVYAIASVLVFPQLVFPFVDRLTGVMLAFGLFA LAFIARPFGSVIFGAIDQRYGRGVKLTIALFLLGGSTAVISMLPSFAAVGPIAIWALAACRIGQGLALAGAWDGMASLLA LNAPENKRGWYAMIPQLGAPFGFMLASGLFAYFVATLAPADFLDWGWRYPFFAAFAINVVALFARLRIVATEEFGALFEK RELRPTRVASLLRAEGGNVLIGAFAPLATFAMFHLVTVFPLSWVVLHGDAQQALNFLRIELFGALVGVGGILASGWIADR ITRQNQLALSALLIGAFSLLAPRLLDGGATGQTAYVVIGFAILGLSFGQAAGAVSSGFSKRYRYTGAALTSDLSWLIGAG FAPLAALGLASLWGLPAIGLYLASGALATLLALTIDRTRRRRQAHC
Sequences:
>Translated_446_residues MASELAIPKSSGLERDARRMHADDKGVRPGEIALGVVIGRTSEFFDFFVYAIASVLVFPQLVFPFVDRLTGVMLAFGLFA LAFIARPFGSVIFGAIDQRYGRGVKLTIALFLLGGSTAVISMLPSFAAVGPIAIWALAACRIGQGLALAGAWDGMASLLA LNAPENKRGWYAMIPQLGAPFGFMLASGLFAYFVATLAPADFLDWGWRYPFFAAFAINVVALFARLRIVATEEFGALFEK RELRPTRVASLLRAEGGNVLIGAFAPLATFAMFHLVTVFPLSWVVLHGDAQQALNFLRIELFGALVGVGGILASGWIADR ITRQNQLALSALLIGAFSLLAPRLLDGGATGQTAYVVIGFAILGLSFGQAAGAVSSGFSKRYRYTGAALTSDLSWLIGAG FAPLAALGLASLWGLPAIGLYLASGALATLLALTIDRTRRRRQAHC >Mature_445_residues ASELAIPKSSGLERDARRMHADDKGVRPGEIALGVVIGRTSEFFDFFVYAIASVLVFPQLVFPFVDRLTGVMLAFGLFAL AFIARPFGSVIFGAIDQRYGRGVKLTIALFLLGGSTAVISMLPSFAAVGPIAIWALAACRIGQGLALAGAWDGMASLLAL NAPENKRGWYAMIPQLGAPFGFMLASGLFAYFVATLAPADFLDWGWRYPFFAAFAINVVALFARLRIVATEEFGALFEKR ELRPTRVASLLRAEGGNVLIGAFAPLATFAMFHLVTVFPLSWVVLHGDAQQALNFLRIELFGALVGVGGILASGWIADRI TRQNQLALSALLIGAFSLLAPRLLDGGATGQTAYVVIGFAILGLSFGQAAGAVSSGFSKRYRYTGAALTSDLSWLIGAGF APLAALGLASLWGLPAIGLYLASGALATLLALTIDRTRRRRQAHC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789941, Length=437, Percent_Identity=33.8672768878719, Blast_Score=194, Evalue=1e-50, Organism=Escherichia coli, GI1788292, Length=425, Percent_Identity=29.4117647058824, Blast_Score=151, Evalue=8e-38, Organism=Escherichia coli, GI1790550, Length=223, Percent_Identity=31.390134529148, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1788942, Length=410, Percent_Identity=24.390243902439, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47375; Mature: 47244
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASELAIPKSSGLERDARRMHADDKGVRPGEIALGVVIGRTSEFFDFFVYAIASVLVFPQ CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH LVFPFVDRLTGVMLAFGLFALAFIARPFGSVIFGAIDQRYGRGVKLTIALFLLGGSTAVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCHHHH SMLPSFAAVGPIAIWALAACRIGQGLALAGAWDGMASLLALNAPENKRGWYAMIPQLGAP HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCCCEEECHHHCCC FGFMLASGLFAYFVATLAPADFLDWGWRYPFFAAFAINVVALFARLRIVATEEFGALFEK HHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RELRPTRVASLLRAEGGNVLIGAFAPLATFAMFHLVTVFPLSWVVLHGDAQQALNFLRIE HCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHH LFGALVGVGGILASGWIADRITRQNQLALSALLIGAFSLLAPRLLDGGATGQTAYVVIGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AILGLSFGQAAGAVSSGFSKRYRYTGAALTSDLSWLIGAGFAPLAALGLASLWGLPAIGL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH YLASGALATLLALTIDRTRRRRQAHC HHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASELAIPKSSGLERDARRMHADDKGVRPGEIALGVVIGRTSEFFDFFVYAIASVLVFPQ CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH LVFPFVDRLTGVMLAFGLFALAFIARPFGSVIFGAIDQRYGRGVKLTIALFLLGGSTAVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCHHHH SMLPSFAAVGPIAIWALAACRIGQGLALAGAWDGMASLLALNAPENKRGWYAMIPQLGAP HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCCCEEECHHHCCC FGFMLASGLFAYFVATLAPADFLDWGWRYPFFAAFAINVVALFARLRIVATEEFGALFEK HHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RELRPTRVASLLRAEGGNVLIGAFAPLATFAMFHLVTVFPLSWVVLHGDAQQALNFLRIE HCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHH LFGALVGVGGILASGWIADRITRQNQLALSALLIGAFSLLAPRLLDGGATGQTAYVVIGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AILGLSFGQAAGAVSSGFSKRYRYTGAALTSDLSWLIGAGFAPLAALGLASLWGLPAIGL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH YLASGALATLLALTIDRTRRRRQAHC HHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]