| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is hflX [H]
Identifier: 16125990
GI number: 16125990
Start: 1920304
End: 1921587
Strand: Direct
Name: hflX [H]
Synonym: CC_1746
Alternate gene names: 16125990
Gene position: 1920304-1921587 (Clockwise)
Preceding gene: 16125989
Following gene: 16125993
Centisome position: 47.81
GC content: 68.54
Gene sequence:
>1284_bases GTGATCCATCCCGCACGCCCTTTGCGGGGCCAGGCCGCCCTCGAAGCCCGGGATCCCAACGCCCGGCTCGAGGAGGCCGT CGGCCTTGCGGTGGCGCTTGATCTCAACGTCGTGGAGGCGCTGGTCGCGCCTCTGCGCGTCGTCACGCCCGCCACCTTAT TCGGCAAGGGCAAGGTCGAGGAGTTCGCCGCGATCTGCGAGGTCGAGCATATCGATGTCGCGGTCTTCGACGACCAGCTC ACGCCCATCCAGCAGCGTAATCTCGAGAAGGCTTTGAAGGTGAAGGTCGTCGACCGCACCGGCCTGATCCTCGAAATCTT CGCCCGCCGGGCCCGGACCCGCGAGGGCCGTCTGCAGGTCGAGCTGGCCAGGCTCGACTATGAGCGCTCGCGCCTCGTGC GGACCTGGACCCACCTGGAACGTCAGCGCGGCGGCACCGGCTCGACCGGCGGCCCCGGCGAAACCCAGATCGAAATCGAC CGCCGCCTGATCGCCGGCACGATCCTCAAGCTCAAGAAGGAGCTCGAGGAGGTTCGGCGGACGCGCACGCTGCATCGCAG CGCTCGCAAAAAGGTTCCGTACCCGACCGTCGCCCTGGTCGGCTACACGAACGCCGGCAAGTCCACGCTGTTCAATCGGC TGACCGAGGCCGAGGTGCTGGCCAAGGACATGCTGTTCGCCACGCTGGACCCGACGCTTCGCACCGTGAAGCTGCCCGAC GGTCGCCCCGCGATCATGTCCGATACGGTGGGCTTCATCTCCGACCTGCCGCACGAGTTGGTCGAGGCTTTCCGCGCCAC CCTCGAGGAGGTGCAGGAGGCTGACGTCGTGCTGCACGTCCGCGATGTGGCCAATCCCGACAGCGAGGCGCAAGCCCGCG ACGTCGAGACGGTGCTCGCCGAACTGGGCGTCACGCTCGACGAGGGCAAGACTGTCGTCGAGGTCTGGAACAAGGTCGAC CTGCTGTCGGAAGATGATCGCGAGATCGTCGAGGGACAGGCCCGGCGCAACGACGCCTCGGCGGTTTCGGCGGTCACGGG CGAGGGGTGCGAGGCGCTGCTGCGGCGCATCGCGGGCCTCATCGATGACTCGCCCCCGGTGGAGGTGAGCCTCGCCGCAC AGGACGGACAGGCCCTGGCCTGGATCTATCGCAACGGCCGCGTGCTCAGCCGCTATGACGGCCCAGGCGGCGAGGTGACG CTGGTCGCCCGCCTCGATGCTCAGGCCCTGGGGCGGTTCGAGCGCCAGTTCCCCGGCGCGCAGGTCTCGGCGGCGGTCGA CTAA
Upstream 100 bases:
>100_bases CTATGAGCCGAGCGCCGACGCCGACGACTGACCCTAGAGCCGTTTGTCCAAATCCAGTTCCAAGTCGATTGACCACGCCG CGCCGATCCTGAAGGCGCTC
Downstream 100 bases:
>100_bases ACCTTCTTCTCCGCGGCCTTGGCGTCGTTCCAGAGCCCGTCCATTTCGGCGAGATCGGACTGATCAGGCGTCTTGCCGCG CTTGGCCAGTTCGGTCTCGA
Product: GTP-binding protein HflX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MIHPARPLRGQAALEARDPNARLEEAVGLAVALDLNVVEALVAPLRVVTPATLFGKGKVEEFAAICEVEHIDVAVFDDQL TPIQQRNLEKALKVKVVDRTGLILEIFARRARTREGRLQVELARLDYERSRLVRTWTHLERQRGGTGSTGGPGETQIEID RRLIAGTILKLKKELEEVRRTRTLHRSARKKVPYPTVALVGYTNAGKSTLFNRLTEAEVLAKDMLFATLDPTLRTVKLPD GRPAIMSDTVGFISDLPHELVEAFRATLEEVQEADVVLHVRDVANPDSEAQARDVETVLAELGVTLDEGKTVVEVWNKVD LLSEDDREIVEGQARRNDASAVSAVTGEGCEALLRRIAGLIDDSPPVEVSLAAQDGQALAWIYRNGRVLSRYDGPGGEVT LVARLDAQALGRFERQFPGAQVSAAVD
Sequences:
>Translated_427_residues MIHPARPLRGQAALEARDPNARLEEAVGLAVALDLNVVEALVAPLRVVTPATLFGKGKVEEFAAICEVEHIDVAVFDDQL TPIQQRNLEKALKVKVVDRTGLILEIFARRARTREGRLQVELARLDYERSRLVRTWTHLERQRGGTGSTGGPGETQIEID RRLIAGTILKLKKELEEVRRTRTLHRSARKKVPYPTVALVGYTNAGKSTLFNRLTEAEVLAKDMLFATLDPTLRTVKLPD GRPAIMSDTVGFISDLPHELVEAFRATLEEVQEADVVLHVRDVANPDSEAQARDVETVLAELGVTLDEGKTVVEVWNKVD LLSEDDREIVEGQARRNDASAVSAVTGEGCEALLRRIAGLIDDSPPVEVSLAAQDGQALAWIYRNGRVLSRYDGPGGEVT LVARLDAQALGRFERQFPGAQVSAAVD >Mature_427_residues MIHPARPLRGQAALEARDPNARLEEAVGLAVALDLNVVEALVAPLRVVTPATLFGKGKVEEFAAICEVEHIDVAVFDDQL TPIQQRNLEKALKVKVVDRTGLILEIFARRARTREGRLQVELARLDYERSRLVRTWTHLERQRGGTGSTGGPGETQIEID RRLIAGTILKLKKELEEVRRTRTLHRSARKKVPYPTVALVGYTNAGKSTLFNRLTEAEVLAKDMLFATLDPTLRTVKLPD GRPAIMSDTVGFISDLPHELVEAFRATLEEVQEADVVLHVRDVANPDSEAQARDVETVLAELGVTLDEGKTVVEVWNKVD LLSEDDREIVEGQARRNDASAVSAVTGEGCEALLRRIAGLIDDSPPVEVSLAAQDGQALAWIYRNGRVLSRYDGPGGEVT LVARLDAQALGRFERQFPGAQVSAAVD
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310124269, Length=277, Percent_Identity=35.0180505415162, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI310124267, Length=277, Percent_Identity=35.0180505415162, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI310124171, Length=277, Percent_Identity=35.0180505415162, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI310124169, Length=277, Percent_Identity=35.0180505415162, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI310133118, Length=319, Percent_Identity=34.7962382445141, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI310133116, Length=298, Percent_Identity=34.8993288590604, Blast_Score=143, Evalue=3e-34, Organism=Escherichia coli, GI1790615, Length=402, Percent_Identity=42.7860696517413, Blast_Score=277, Evalue=1e-75, Organism=Caenorhabditis elegans, GI17561038, Length=435, Percent_Identity=31.9540229885057, Blast_Score=184, Evalue=8e-47, Organism=Drosophila melanogaster, GI24650079, Length=428, Percent_Identity=33.1775700934579, Blast_Score=162, Evalue=4e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 46897; Mature: 46897
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHPARPLRGQAALEARDPNARLEEAVGLAVALDLNVVEALVAPLRVVTPATLFGKGKVE CCCCCCCCCCCCEEECCCCCHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCHHHCCCCCHH EFAAICEVEHIDVAVFDDQLTPIQQRNLEKALKVKVVDRTGLILEIFARRARTREGRLQV HHHHHHHHEECEEEEECCCCCCHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCCCEEE ELARLDYERSRLVRTWTHLERQRGGTGSTGGPGETQIEIDRRLIAGTILKLKKELEEVRR EEEHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH TRTLHRSARKKVPYPTVALVGYTNAGKSTLFNRLTEAEVLAKDMLFATLDPTLRTVKLPD HHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC GRPAIMSDTVGFISDLPHELVEAFRATLEEVQEADVVLHVRDVANPDSEAQARDVETVLA CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHH ELGVTLDEGKTVVEVWNKVDLLSEDDREIVEGQARRNDASAVSAVTGEGCEALLRRIAGL HHCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCHHCCCCHHHHHHHCCCCHHHHHHHHHHH IDDSPPVEVSLAAQDGQALAWIYRNGRVLSRYDGPGGEVTLVARLDAQALGRFERQFPGA CCCCCCCEEEEECCCCCEEEEEEECCEEEEEECCCCCCEEEEEECCHHHHHHHHHHCCCC QVSAAVD CEEECCC >Mature Secondary Structure MIHPARPLRGQAALEARDPNARLEEAVGLAVALDLNVVEALVAPLRVVTPATLFGKGKVE CCCCCCCCCCCCEEECCCCCHHHHHHCCEEEEEHHHHHHHHHHHHHHHCCHHHCCCCCHH EFAAICEVEHIDVAVFDDQLTPIQQRNLEKALKVKVVDRTGLILEIFARRARTREGRLQV HHHHHHHHEECEEEEECCCCCCHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCCCCEEE ELARLDYERSRLVRTWTHLERQRGGTGSTGGPGETQIEIDRRLIAGTILKLKKELEEVRR EEEHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH TRTLHRSARKKVPYPTVALVGYTNAGKSTLFNRLTEAEVLAKDMLFATLDPTLRTVKLPD HHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC GRPAIMSDTVGFISDLPHELVEAFRATLEEVQEADVVLHVRDVANPDSEAQARDVETVLA CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHH ELGVTLDEGKTVVEVWNKVDLLSEDDREIVEGQARRNDASAVSAVTGEGCEALLRRIAGL HHCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCHHCCCCHHHHHHHCCCCHHHHHHHHHHH IDDSPPVEVSLAAQDGQALAWIYRNGRVLSRYDGPGGEVTLVARLDAQALGRFERQFPGA CCCCCCCEEEEECCCCCEEEEEEECCEEEEEECCCCCCEEEEEECCHHHHHHHHHHCCCC QVSAAVD CEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]