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The map label for this gene is 16125878

Identifier: 16125878

GI number: 16125878

Start: 1810193

End: 1810525

Strand: Direct

Name: 16125878

Synonym: CC_1632

Alternate gene names: NA

Gene position: 1810193-1810525 (Clockwise)

Preceding gene: 16125877

Following gene: 16125880

Centisome position: 45.06

GC content: 68.17

Gene sequence:

>333_bases
GTGTTCGCAGCCCTGGCGTCTGGCGCGGTCGCCGCGCCGTCTGGACAGCAGCTGTTCGAGCAGCGGTGCGGCATGTGCCA
TTCGCTGCAGCAGGCTCCCGGCAAGATGGGGCCGCCCTTGGCGGGTGTGGTCGGTCGCAAGGCGGCGAGCTTTCCGGGCT
ACACCTACAGCGCGGCGCTGAAGGGCTCGGGAATCACCTGGACCGCCGACAAGCTCGACGCCTATTCGAAGGCCCCGACC
AAGGTCGTGCCGGGCACCAAGATGCTGTTGGGAGCGCCCAACGACGCCGAGCGCGCGGCGGTGATCGCCTATCTGGCCAG
CGTCAAGAAATAG

Upstream 100 bases:

>100_bases
CGGCTCTGAGGCCGGGCGCAATCGACGGCTGCTTGGCCTGTAGTCCAAGCGCGTGTTCTGACGGAGTGGCTTGATGAAGG
TTCGGCTTACCCTGGCGGCG

Downstream 100 bases:

>100_bases
GCTGATTTCGCGTTAGGTACGGGCGCCAATGCGGCTGGAAATCCTCGTCCTTCGACAAGCTCAGGATGAGGATTTTTCGC
GAACCGAGGTCAGCAGTCGT

Product: cytochrome c family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MFAALASGAVAAPSGQQLFEQRCGMCHSLQQAPGKMGPPLAGVVGRKAASFPGYTYSAALKGSGITWTADKLDAYSKAPT
KVVPGTKMLLGAPNDAERAAVIAYLASVKK

Sequences:

>Translated_110_residues
MFAALASGAVAAPSGQQLFEQRCGMCHSLQQAPGKMGPPLAGVVGRKAASFPGYTYSAALKGSGITWTADKLDAYSKAPT
KVVPGTKMLLGAPNDAERAAVIAYLASVKK
>Mature_110_residues
MFAALASGAVAAPSGQQLFEQRCGMCHSLQQAPGKMGPPLAGVVGRKAASFPGYTYSAALKGSGITWTADKLDAYSKAPT
KVVPGTKMLLGAPNDAERAAVIAYLASVKK

Specific function: Unknown

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=94, Percent_Identity=43.6170212765958, Blast_Score=86, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17539604, Length=92, Percent_Identity=41.304347826087, Blast_Score=83, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17566554, Length=92, Percent_Identity=40.2173913043478, Blast_Score=80, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6320796, Length=102, Percent_Identity=34.3137254901961, Blast_Score=78, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6322508, Length=99, Percent_Identity=35.3535353535354, Blast_Score=74, Evalue=7e-15,
Organism=Drosophila melanogaster, GI17137204, Length=104, Percent_Identity=44.2307692307692, Blast_Score=89, Evalue=5e-19,
Organism=Drosophila melanogaster, GI17137228, Length=101, Percent_Identity=44.5544554455446, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11242; Mature: 11242

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAALASGAVAAPSGQQLFEQRCGMCHSLQQAPGKMGPPLAGVVGRKAASFPGYTYSAAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEEEEEE
KGSGITWTADKLDAYSKAPTKVVPGTKMLLGAPNDAERAAVIAYLASVKK
CCCCCEEEHHHHHHHCCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFAALASGAVAAPSGQQLFEQRCGMCHSLQQAPGKMGPPLAGVVGRKAASFPGYTYSAAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEEEEEE
KGSGITWTADKLDAYSKAPTKVVPGTKMLLGAPNDAERAAVIAYLASVKK
CCCCCEEEHHHHHHHCCCCCEECCCCEEEEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2823792; 8809072 [H]