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The map label for this gene is yiiZ [H]

Identifier: 16125695

GI number: 16125695

Start: 1596867

End: 1597850

Strand: Direct

Name: yiiZ [H]

Synonym: CC_1446

Alternate gene names: 16125695

Gene position: 1596867-1597850 (Clockwise)

Preceding gene: 16125694

Following gene: 16125696

Centisome position: 39.75

GC content: 65.45

Gene sequence:

>984_bases
ATGAGACCTTCTCGCCGAGCGTTGATCACCACCGCCCTGGCGGCCCCGCTCGCGGCCTGTGTCCAGGAGATCGGCGAACG
GCCGTTGCGCGGCGCAGACAGCCATCCTGCGGGCTATCCGACGGTCGAGGCCGTCAATCATTTCGGCGCCCTGATTTCGC
AACGGACGAATGGGCGGCTCAGGCTTCAGAACTATGCCGGCGGCCAGCTGGGTGAAGAAAAGGACACGCTGGAGATCACC
GTCTTCGGCGGGTTGGACATCAATCGGGTGAATCTAGCCCCGCTCAATCCGATTGAGCCGCTGACCCTCGTCCCGTCCTT
GCCCTTCCTGTTCCAGTCGACGGACCATATGCGTCGGTCCCTCGATGGAGCGCCCGGCCGGACGATATTGAACAGCCTGG
AGCGGCACGGGCTGATCGGCTTGGCCTTCTACGATTCCGGCGAGCGCAGCTTCTACAATACCCGCGGTCCGATCCGGACC
CCGGCCGACATGCGCGGTCTCAAACTGCGGGTCCAGACGTCGAACCTCCCTATCGCCATGGTTCAGGCGCTCGGGGCCAG
CCCGATCCCCATGTCCTATGGCGAGGTCTTTCAGGCGCTGGTCCAGGGGGTCATCGACGGGGCCGAGAACAACTGGCCCT
CCTATCAGGACAGTCGCCATTTCGAGGTCGCGCGCTTCTACAGCGTGACCCGCCACGTCATGGCCCCGGAGGTGCTCGTG
GCCTCGGCCCGGACCTGGGCCAAACTGTCCTCGTCCGATCGTGAGATCATCCGAGACGCCGCGACCGAGAGCGTGCCCTT
CATGCGCCGACTGTGGGAGGCTCGCGAGACGAGCGCCCGGCAGGCGATGATCGACGCCGGCGTGGAGGTCGTCGAGGATC
TGGATCGTTCGGCCTTCCAGGCGGCCATGGCGCCTGTCTGGGATCGGTTCATCACCTCGCCGGCGCAAACCGCGCTCGTC
AACCAGATCCGGGGCATGGTGTGA

Upstream 100 bases:

>100_bases
CCCAAAATGTTTCGCTCATCGAACACCGGCTCGAGGAAGACGAGGCTCATGAGCCGGCGCACGAACTTGGCTGTGGGCTC
GTCGAGGAAACCTATCGCCC

Downstream 100 bases:

>100_bases
TGCTGGACAGTCTCGCCTTCATTTCGCGCTGGATCAGCCGCGCGACCCTGGCGTTCGCGGCGATCGGATTGATCGCCATG
ACCGGAATCATCGGTTGGGC

Product: TRAP dicarboxylate family transporter DctP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MRPSRRALITTALAAPLAACVQEIGERPLRGADSHPAGYPTVEAVNHFGALISQRTNGRLRLQNYAGGQLGEEKDTLEIT
VFGGLDINRVNLAPLNPIEPLTLVPSLPFLFQSTDHMRRSLDGAPGRTILNSLERHGLIGLAFYDSGERSFYNTRGPIRT
PADMRGLKLRVQTSNLPIAMVQALGASPIPMSYGEVFQALVQGVIDGAENNWPSYQDSRHFEVARFYSVTRHVMAPEVLV
ASARTWAKLSSSDREIIRDAATESVPFMRRLWEARETSARQAMIDAGVEVVEDLDRSAFQAAMAPVWDRFITSPAQTALV
NQIRGMV

Sequences:

>Translated_327_residues
MRPSRRALITTALAAPLAACVQEIGERPLRGADSHPAGYPTVEAVNHFGALISQRTNGRLRLQNYAGGQLGEEKDTLEIT
VFGGLDINRVNLAPLNPIEPLTLVPSLPFLFQSTDHMRRSLDGAPGRTILNSLERHGLIGLAFYDSGERSFYNTRGPIRT
PADMRGLKLRVQTSNLPIAMVQALGASPIPMSYGEVFQALVQGVIDGAENNWPSYQDSRHFEVARFYSVTRHVMAPEVLV
ASARTWAKLSSSDREIIRDAATESVPFMRRLWEARETSARQAMIDAGVEVVEDLDRSAFQAAMAPVWDRFITSPAQTALV
NQIRGMV
>Mature_327_residues
MRPSRRALITTALAAPLAACVQEIGERPLRGADSHPAGYPTVEAVNHFGALISQRTNGRLRLQNYAGGQLGEEKDTLEIT
VFGGLDINRVNLAPLNPIEPLTLVPSLPFLFQSTDHMRRSLDGAPGRTILNSLERHGLIGLAFYDSGERSFYNTRGPIRT
PADMRGLKLRVQTSNLPIAMVQALGASPIPMSYGEVFQALVQGVIDGAENNWPSYQDSRHFEVARFYSVTRHVMAPEVLV
ASARTWAKLSSSDREIIRDAATESVPFMRRLWEARETSARQAMIDAGVEVVEDLDRSAFQAAMAPVWDRFITSPAQTALV
NQIRGMV

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=291, Percent_Identity=33.6769759450172, Blast_Score=160, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 35994; Mature: 35994

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPSRRALITTALAAPLAACVQEIGERPLRGADSHPAGYPTVEAVNHFGALISQRTNGRL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE
RLQNYAGGQLGEEKDTLEITVFGGLDINRVNLAPLNPIEPLTLVPSLPFLFQSTDHMRRS
EEECCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCHHHCCCCHHHHCCHHHHHHH
LDGAPGRTILNSLERHGLIGLAFYDSGERSFYNTRGPIRTPADMRGLKLRVQTSNLPIAM
CCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHH
VQALGASPIPMSYGEVFQALVQGVIDGAENNWPSYQDSRHFEVARFYSVTRHVMAPEVLV
HHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ASARTWAKLSSSDREIIRDAATESVPFMRRLWEARETSARQAMIDAGVEVVEDLDRSAFQ
HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAMAPVWDRFITSPAQTALVNQIRGMV
HHHHHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRPSRRALITTALAAPLAACVQEIGERPLRGADSHPAGYPTVEAVNHFGALISQRTNGRL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE
RLQNYAGGQLGEEKDTLEITVFGGLDINRVNLAPLNPIEPLTLVPSLPFLFQSTDHMRRS
EEECCCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCHHHCCCCHHHHCCHHHHHHH
LDGAPGRTILNSLERHGLIGLAFYDSGERSFYNTRGPIRTPADMRGLKLRVQTSNLPIAM
CCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHH
VQALGASPIPMSYGEVFQALVQGVIDGAENNWPSYQDSRHFEVARFYSVTRHVMAPEVLV
HHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ASARTWAKLSSSDREIIRDAATESVPFMRRLWEARETSARQAMIDAGVEVVEDLDRSAFQ
HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAMAPVWDRFITSPAQTALVNQIRGMV
HHHHHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]