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The map label for this gene is yieP [H]

Identifier: 16125669

GI number: 16125669

Start: 1567921

End: 1568667

Strand: Direct

Name: yieP [H]

Synonym: CC_1420

Alternate gene names: 16125669

Gene position: 1567921-1568667 (Clockwise)

Preceding gene: 16125666

Following gene: 16125670

Centisome position: 39.03

GC content: 67.07

Gene sequence:

>747_bases
GTGGCCAAGGCGAGGGGCGAAGAGGCGGGCGGCGAGATCGAGCGCGAAGACGTGGCCTCCGGTCGTCTTCATGGAGCGAT
CGCCCGTTCGCTCGGCGCGGCGATCGTCTCGGGCAAGCACCAGCCCGGCGATATTTTGACCAACGAGATCGAGGCCAGCG
AAAGGCTCCAAGTCTCGCGCAGCGCTTATCGCGAGGCCATCCGTATTCTGGCCGCCAAGGGTCTGGTGGAGAGTCGGCCG
AAGACCGGAACCCGCGTCAGCCCTCGCGCGCGCTGGCGGCTGCTGGACCCGGAGGTCTTGTCCTGGTTTTTCGAGTCCGA
GCCGAGCGAGTCCTTTCTGCAGGAGCTTTATGAGCTGCGCATGATCGTCGAGCCCGCCGCTGCGGCCTTGGCGGCGAAGC
GTCGCGACCAGGGGCAACTGGAACGCATGCGCGCGGCGCTGGTTGTGATGCAGCACGAGACGCTCGCCACCGAAGCGGGG
CAGGCGGCCGATCGCGATTTCCACGACGCGGTGCTGGAAGCGACGGCGAACGGACCGCTCTACACCCTCAGCAGCAGCAT
CGGCGCTGCGGTGCGCTGGACCACGATTTTCAAGCAGCGCTCGCGCAATCTCGCGCGCGATCCCGTCCCCGATCACTGGA
AGGTGTTCGACGCCATCGCCGCCGGACGCGAGGATCAGGCGCGTGAGGCGATGGAGCGGCTCGTGACTCTGGCCCTGGAC
GATACGCGCGCGTCGATGAAGGCTTAA

Upstream 100 bases:

>100_bases
GCGGCTGGTCGAATTCCCTTGTTCTGGACGGGGCACTCTTCCTAGAGTCCCGTCGCGCGGGCCTGCTGGTCCCCGCTGAG
CATTCTGGAGCGACGAGCGG

Downstream 100 bases:

>100_bases
AGGCGTGGGGCAATCTCGCGCGCCCAAAAGGCGCAGCCTGCGCATTGACGCTCTAGGGTGTCGGGTATAGTCAGACAAAT
GCGATAAGCGAGGCGGTGGT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MAKARGEEAGGEIEREDVASGRLHGAIARSLGAAIVSGKHQPGDILTNEIEASERLQVSRSAYREAIRILAAKGLVESRP
KTGTRVSPRARWRLLDPEVLSWFFESEPSESFLQELYELRMIVEPAAAALAAKRRDQGQLERMRAALVVMQHETLATEAG
QAADRDFHDAVLEATANGPLYTLSSSIGAAVRWTTIFKQRSRNLARDPVPDHWKVFDAIAAGREDQAREAMERLVTLALD
DTRASMKA

Sequences:

>Translated_248_residues
MAKARGEEAGGEIEREDVASGRLHGAIARSLGAAIVSGKHQPGDILTNEIEASERLQVSRSAYREAIRILAAKGLVESRP
KTGTRVSPRARWRLLDPEVLSWFFESEPSESFLQELYELRMIVEPAAAALAAKRRDQGQLERMRAALVVMQHETLATEAG
QAADRDFHDAVLEATANGPLYTLSSSIGAAVRWTTIFKQRSRNLARDPVPDHWKVFDAIAAGREDQAREAMERLVTLALD
DTRASMKA
>Mature_247_residues
AKARGEEAGGEIEREDVASGRLHGAIARSLGAAIVSGKHQPGDILTNEIEASERLQVSRSAYREAIRILAAKGLVESRPK
TGTRVSPRARWRLLDPEVLSWFFESEPSESFLQELYELRMIVEPAAAALAAKRRDQGQLERMRAALVVMQHETLATEAGQ
AADRDFHDAVLEATANGPLYTLSSSIGAAVRWTTIFKQRSRNLARDPVPDHWKVFDAIAAGREDQAREAMERLVTLALDD
TRASMKA

Specific function: Repressor For The Dgorkat Operon. Binds D-Galactonate As An Inducer. [C]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=220, Percent_Identity=31.8181818181818, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI48994955, Length=208, Percent_Identity=34.6153846153846, Blast_Score=100, Evalue=6e-23,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 27342; Mature: 27211

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKARGEEAGGEIEREDVASGRLHGAIARSLGAAIVSGKHQPGDILTNEIEASERLQVSR
CCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
SAYREAIRILAAKGLVESRPKTGTRVSPRARWRLLDPEVLSWFFESEPSESFLQELYELR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEECCHHHHHHHHCCCCHHHHHHHHHHHH
MIVEPAAAALAAKRRDQGQLERMRAALVVMQHETLATEAGQAADRDFHDAVLEATANGPL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCE
YTLSSSIGAAVRWTTIFKQRSRNLARDPVPDHWKVFDAIAAGREDQAREAMERLVTLALD
EEEHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
DTRASMKA
CHHHHCCC
>Mature Secondary Structure 
AKARGEEAGGEIEREDVASGRLHGAIARSLGAAIVSGKHQPGDILTNEIEASERLQVSR
CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
SAYREAIRILAAKGLVESRPKTGTRVSPRARWRLLDPEVLSWFFESEPSESFLQELYELR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEECCHHHHHHHHCCCCHHHHHHHHHHHH
MIVEPAAAALAAKRRDQGQLERMRAALVVMQHETLATEAGQAADRDFHDAVLEATANGPL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCE
YTLSSSIGAAVRWTTIFKQRSRNLARDPVPDHWKVFDAIAAGREDQAREAMERLVTLALD
EEEHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
DTRASMKA
CHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]