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The map label for this gene is iolB [H]

Identifier: 16125550

GI number: 16125550

Start: 1449071

End: 1449877

Strand: Direct

Name: iolB [H]

Synonym: CC_1301

Alternate gene names: 16125550

Gene position: 1449071-1449877 (Clockwise)

Preceding gene: 16125549

Following gene: 16125551

Centisome position: 36.07

GC content: 68.03

Gene sequence:

>807_bases
ATGAGCAAGCTGCTGGTTCGCCCCCATGCGCCCGACGCGACGGGCTCGGTGCTCGAGGTCACGCCCGCCTCGGCCGGCTG
GACCCATGTCGGCTTCCAGGTCGTCAAGCTGGCGGCCGGCGCGGTCTTCGAGGGCGGTGATCCCGATCGCGAAACCTGCA
TCGTGGTGATGAGCGGAACCGCCGAAGTCTCGGCCCAGGGCGTCTCCTTCGGCGCGATCGGTGGTCGCGCCAGCGTGTTC
GAGGACAAGGCGCCGGGTGCGGTCTATGTGCCGGCCGCCATCGCCTTCTCGGTGTCGGCTGTCAGTGACGTGGAGGTGGC
GCTGTGCAGCGCGCCGGGCCAGCCGGGCGGCCAAGCGCGGCTGATCGCCGAGCACGATATGCCACGCGAGACGCGGGGCA
GGGGAACCAACACGCGCTTTGTCCGCAACATCCTGCCCGAGACGGCGCCGGCCGATGGCCTGTTGGTGGTCGAGGTGATC
ACCCCAGGCGGCCACTGGTCCAGTTATCCGCCTCATAAGCACGACACCGCGGCGGAGGGCGAGGAAACGGCGCTGGAGGA
AACCTACTATCATCGCCTGAACCCGCCCCAGGGCTTCGCCTTCCAGCGCGTCTACACCGACGACCGAAGCCTGGACGAAA
CGGTCTGCGTGCAAGACGGGGACGTCGTGATGGTGCCCCGCGGCTACCACCCAGTCGGCGCGCCGCATGGCTACGACCTT
TACTATCTGAACGTCATGGCAGGCCCGCACCGGAAGTGGATCTTCCGCAATGACCCCGCCCACGACTGGATCATGCGCCA
GGCCTGA

Upstream 100 bases:

>100_bases
CCGAACAGGATCCCGCCATCGCCAATCCGCGCCAGTACGGCGAGATGGGCTTGGCGACCCTCAAAAAGGAAGCCGCTGCA
ACGGGCCTGAGGGCGGCGTG

Downstream 100 bases:

>100_bases
ACGGCCGCCCCAGAACGACGAGAGGAGCGCGTGATGCGCGACATTCCCCATTTCATCGGCGGCCAGAAGGTCGACGGAGC
CTCGGGCCGTTTCGGCGAGG

Product: iolB protein

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSKLLVRPHAPDATGSVLEVTPASAGWTHVGFQVVKLAAGAVFEGGDPDRETCIVVMSGTAEVSAQGVSFGAIGGRASVF
EDKAPGAVYVPAAIAFSVSAVSDVEVALCSAPGQPGGQARLIAEHDMPRETRGRGTNTRFVRNILPETAPADGLLVVEVI
TPGGHWSSYPPHKHDTAAEGEETALEETYYHRLNPPQGFAFQRVYTDDRSLDETVCVQDGDVVMVPRGYHPVGAPHGYDL
YYLNVMAGPHRKWIFRNDPAHDWIMRQA

Sequences:

>Translated_268_residues
MSKLLVRPHAPDATGSVLEVTPASAGWTHVGFQVVKLAAGAVFEGGDPDRETCIVVMSGTAEVSAQGVSFGAIGGRASVF
EDKAPGAVYVPAAIAFSVSAVSDVEVALCSAPGQPGGQARLIAEHDMPRETRGRGTNTRFVRNILPETAPADGLLVVEVI
TPGGHWSSYPPHKHDTAAEGEETALEETYYHRLNPPQGFAFQRVYTDDRSLDETVCVQDGDVVMVPRGYHPVGAPHGYDL
YYLNVMAGPHRKWIFRNDPAHDWIMRQA
>Mature_267_residues
SKLLVRPHAPDATGSVLEVTPASAGWTHVGFQVVKLAAGAVFEGGDPDRETCIVVMSGTAEVSAQGVSFGAIGGRASVFE
DKAPGAVYVPAAIAFSVSAVSDVEVALCSAPGQPGGQARLIAEHDMPRETRGRGTNTRFVRNILPETAPADGLLVVEVIT
PGGHWSSYPPHKHDTAAEGEETALEETYYHRLNPPQGFAFQRVYTDDRSLDETVCVQDGDVVMVPRGYHPVGAPHGYDLY
YLNVMAGPHRKWIFRNDPAHDWIMRQA

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 28787; Mature: 28655

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLLVRPHAPDATGSVLEVTPASAGWTHVGFQVVKLAAGAVFEGGDPDRETCIVVMSGT
CCCEEECCCCCCCCCCEEEECCCCCCCHHHHHHEEEHHHCEEECCCCCCCCEEEEEEECC
AEVSAQGVSFGAIGGRASVFEDKAPGAVYVPAAIAFSVSAVSDVEVALCSAPGQPGGQAR
CEEEECCEEEECCCCCCEEECCCCCCEEEECCEEEEEECCCCCEEEEEECCCCCCCCCEE
LIAEHDMPRETRGRGTNTRFVRNILPETAPADGLLVVEVITPGGHWSSYPPHKHDTAAEG
EEECCCCCHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
EETALEETYYHRLNPPQGFAFQRVYTDDRSLDETVCVQDGDVVMVPRGYHPVGAPHGYDL
CHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEE
YYLNVMAGPHRKWIFRNDPAHDWIMRQA
EEEEEECCCCEEEEECCCCCHHHHEECC
>Mature Secondary Structure 
SKLLVRPHAPDATGSVLEVTPASAGWTHVGFQVVKLAAGAVFEGGDPDRETCIVVMSGT
CCEEECCCCCCCCCCEEEECCCCCCCHHHHHHEEEHHHCEEECCCCCCCCEEEEEEECC
AEVSAQGVSFGAIGGRASVFEDKAPGAVYVPAAIAFSVSAVSDVEVALCSAPGQPGGQAR
CEEEECCEEEECCCCCCEEECCCCCCEEEECCEEEEEECCCCCEEEEEECCCCCCCCCEE
LIAEHDMPRETRGRGTNTRFVRNILPETAPADGLLVVEVITPGGHWSSYPPHKHDTAAEG
EEECCCCCHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
EETALEETYYHRLNPPQGFAFQRVYTDDRSLDETVCVQDGDVVMVPRGYHPVGAPHGYDL
CHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCEE
YYLNVMAGPHRKWIFRNDPAHDWIMRQA
EEEEEECCCCEEEEECCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA