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The map label for this gene is yfhH [C]

Identifier: 16125546

GI number: 16125546

Start: 1443390

End: 1444265

Strand: Direct

Name: yfhH [C]

Synonym: CC_1297

Alternate gene names: 16125546

Gene position: 1443390-1444265 (Clockwise)

Preceding gene: 16125541

Following gene: 16125547

Centisome position: 35.93

GC content: 64.95

Gene sequence:

>876_bases
ATGAGCGAAGATACTGCGGCTGCGAGCCCGCCGGCCAGCGCCGAGGAGCTAAGATCTGCGATCCTTGAGCGCTATGATTC
GCTCAGCAAACGCCTGCAGCAGATCGCCCGTTATGTGCTCGACGAGCCGAACGAGCTGGCGCTGGAGACGCTGGCGGTGA
TCTCCGAACGGTGTGGCGTCCAGCCCTCGGCGATCGTGCGGTTCGCCAAGACTTTCGGTTATCCCGGCGCCAGCCAGATG
CAGCGGTTGTTCCGCGACGGCCTGCTGTCGGGCCATGCTGGGCTGGGCTACAGCGAGCGGGTGCGGCACTTCAACGAGGC
CGTCGCCATGACGCCCCAGGGCGGCGCCGACGTGCTGGCCGAGTTCGTGGAAGGCAACACGCTGGCGCTGCAGAACCTAG
GCCAGACGGTCAGCGCCGCCGACATGGCCAAGGCCGTTTCTCTGATCGACAAGGCCGAAACGGTCTATGTCGCCGGCTTC
CGCCGCTCGTTCCCGGTTGCGTCCTATCTGGCCTATTCGCTGCAACAGGCCAACAAGCGCACGCTGTTCATCGACGGCGT
GGCCGGGCTCACCAAGCAGCAGGTCCAGACCATCGGGCCCAAGGATCTCCTGATCGCCGTCAGCTATCATCCCTATGCCG
AGGAGACGGTGATGGCGGCCGAGATGGCTACCCAGCGCGGCGCCAAGATCCTTTCGATCAGCGACAGCCTCGTCAGTCCG
ATCGCAAAGCCGGCCGAACTGGTGCTGCATGTCCGCGAATCCGAGGTGCGCACGTTCCGCTCCCTGGCGGCCTCCATCTG
TCTAGCCCAGGCGCTCGTGATCGGCTTTGCGTTCGAAGCCGGGAAGGAAGAACGCAAGGCCCAGAAGGCGGGATAG

Upstream 100 bases:

>100_bases
CCTTCTAGATGGAAAGCGGAACGGCTCGTCGAGTTTCCGGCGTTTGTGTTGGGGTGCGGAACAGATATTCTAAAACTGGA
GCCATTATGTCGGGGCGAAG

Downstream 100 bases:

>100_bases
CAATCCCACTGGACCATATGTTCCATCGCTGCTGGAAAATGAAATGCATATTGCAAGCATTTCAGGCCTGGAATATGCGT
TACATTATCGCCGGTGGGGA

Product: SIS domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; SIS Domain Protein; SIS Domain-Containing Protein; Transcriptional Regulator Protein; Sugar Isomerase; Transcriptional Regulator Rpir Family; Transcription Regulator Protein; SIS Family Regulator; Transcriptional Regulator RpiR Family Protein; N-Acylmannosamine Kinase; RpiR-Family Transcriptional Regulator; Conserved Hypothethical Protein; Transcriptional Regulator Of Myo-Inositol Catabolism Operon; Bifunctional Protein Glk; Transcriptional Regulator IolR; Helix-Turn-Helix Protein RpiR; N-Acetylmannosamine Kinase; GlvR Family Transcriptional Regulator; RpiR Family Regulatory; Transcription Regulator; Transcriptional Regulator Family Protein; RpiR Family Transcription Regulator Protein; HTH/SIS Domain-Containing Protein; Sugar Isomerase Family Protein; Helix-Turn-Helix Domain RpiR Family

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSEDTAAASPPASAEELRSAILERYDSLSKRLQQIARYVLDEPNELALETLAVISERCGVQPSAIVRFAKTFGYPGASQM
QRLFRDGLLSGHAGLGYSERVRHFNEAVAMTPQGGADVLAEFVEGNTLALQNLGQTVSAADMAKAVSLIDKAETVYVAGF
RRSFPVASYLAYSLQQANKRTLFIDGVAGLTKQQVQTIGPKDLLIAVSYHPYAEETVMAAEMATQRGAKILSISDSLVSP
IAKPAELVLHVRESEVRTFRSLAASICLAQALVIGFAFEAGKEERKAQKAG

Sequences:

>Translated_291_residues
MSEDTAAASPPASAEELRSAILERYDSLSKRLQQIARYVLDEPNELALETLAVISERCGVQPSAIVRFAKTFGYPGASQM
QRLFRDGLLSGHAGLGYSERVRHFNEAVAMTPQGGADVLAEFVEGNTLALQNLGQTVSAADMAKAVSLIDKAETVYVAGF
RRSFPVASYLAYSLQQANKRTLFIDGVAGLTKQQVQTIGPKDLLIAVSYHPYAEETVMAAEMATQRGAKILSISDSLVSP
IAKPAELVLHVRESEVRTFRSLAASICLAQALVIGFAFEAGKEERKAQKAG
>Mature_290_residues
SEDTAAASPPASAEELRSAILERYDSLSKRLQQIARYVLDEPNELALETLAVISERCGVQPSAIVRFAKTFGYPGASQMQ
RLFRDGLLSGHAGLGYSERVRHFNEAVAMTPQGGADVLAEFVEGNTLALQNLGQTVSAADMAKAVSLIDKAETVYVAGFR
RSFPVASYLAYSLQQANKRTLFIDGVAGLTKQQVQTIGPKDLLIAVSYHPYAEETVMAAEMATQRGAKILSISDSLVSPI
AKPAELVLHVRESEVRTFRSLAASICLAQALVIGFAFEAGKEERKAQKAG

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31340; Mature: 31209

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDTAAASPPASAEELRSAILERYDSLSKRLQQIARYVLDEPNELALETLAVISERCGV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
QPSAIVRFAKTFGYPGASQMQRLFRDGLLSGHAGLGYSERVRHFNEAVAMTPQGGADVLA
CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
EFVEGNTLALQNLGQTVSAADMAKAVSLIDKAETVYVAGFRRSFPVASYLAYSLQQANKR
HHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCC
TLFIDGVAGLTKQQVQTIGPKDLLIAVSYHPYAEETVMAAEMATQRGAKILSISDSLVSP
EEEEECHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHH
IAKPAELVLHVRESEVRTFRSLAASICLAQALVIGFAFEAGKEERKAQKAG
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
>Mature Secondary Structure 
SEDTAAASPPASAEELRSAILERYDSLSKRLQQIARYVLDEPNELALETLAVISERCGV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
QPSAIVRFAKTFGYPGASQMQRLFRDGLLSGHAGLGYSERVRHFNEAVAMTPQGGADVLA
CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
EFVEGNTLALQNLGQTVSAADMAKAVSLIDKAETVYVAGFRRSFPVASYLAYSLQQANKR
HHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCC
TLFIDGVAGLTKQQVQTIGPKDLLIAVSYHPYAEETVMAAEMATQRGAKILSISDSLVSP
EEEEECHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHH
IAKPAELVLHVRESEVRTFRSLAASICLAQALVIGFAFEAGKEERKAQKAG
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA