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The map label for this gene is secY

Identifier: 16125517

GI number: 16125517

Start: 1415150

End: 1416472

Strand: Direct

Name: secY

Synonym: CC_1268

Alternate gene names: 16125517

Gene position: 1415150-1416472 (Clockwise)

Preceding gene: 16125516

Following gene: 16125518

Centisome position: 35.23

GC content: 63.11

Gene sequence:

>1323_bases
ATGAATTTCGCGTCGTTCCAGAAGGCGACCGAACTTCACAAGCGTATCTGGTTCACGATCATCGCCTTGATCGTCTACCG
CCTTGGCACCTACGTTCCGATCCCGGGTGTTGATCCGACCGCCTTCGCGTCGCTGTTCAGCCAGAACAGCAAGGGCCTCC
TGGGCATGTTCGACATGTTCTCGGGGGGGGCCGTCGAGCGGATGGCGATCTTCTCGCTGAACGTCATGCCCTATATCAGC
GCCTCGATTATCGTGCAGCTGATGGGCACGGTGTATCCGCCGTGGGAGAAGCTGAAGAAGGAAGGCGGGGAGGCCGGTCG
CAAGACCCTGAACCAGTACACGCGCTACCTGGCTGTCATTCTGGCCGTGGTGCAGTCGGCTTCGATCGCGATCGGTATCG
CGGCTCAGCCCGGCGTGGTGGCTGATGGCGTCGGCCACACCTTCTTCATCGTTTCGACGATCGTGGCGCTGACGGGCGGT
ACGATGTTCCTGATGTGGCTGGGCGAGCAGATCACCAGCCGCGGCGTCGGCAACGGCGTGTCGCTGATCATCTTCGCGGG
CATCGTTGCGAGCCTGCCGATCAAGCTGATGCAGATGCTGACCCAAGCGCAGTCGAACAACAACTACTTGCCGCTGTTCC
TGGTGGTGTTCGGGGGCATCGCCGCCATCCTGGCGATCGTCTTCATCGAGCGCTCGCAGCGTCGTCTGCTGGTCCACTAT
CCCAAGCGCCAGCAGGGCAACCGCATGATCGGCGGCGAAAGCTCGTTCATGCCGCTGAAGATCAACACCGCGGGCGTCAT
CCCGCCGATCTTCGCCTCGTCGCTGCTGCTGCTGCCGACGACCGCCCTGCAGCTCGTGCAGACCGCGAACCTGCCGGGCT
GGGCCTCGTGGTTGCCGGCTATGGTCGGCGCGCTGCAACACGGGCAGCCGGCGTTCCTGGCGCTCTATGCGCTGCTGATC
ATCTTCTTCTCGTTCTTCTACACCTCGGTGGTGTTCAATCCCGACGAGACGGCCGAGAACCTGCGCAAGTACGGCGGCTT
CCTGCCGGGCATCCGTCCGGGCAAGCGCACCGCCGAGTATCTGGACTATGTCCTGACCCGCCTCACGGTGATCGGCGCGG
CCTACATCACGGCGGTCTGTATCGCGCCGGAGTTTGTGATGATGGCGATGAACTCCACCCAGTTCGCGCTGGGCGGCACC
TCGATCCTGATCGTCGTGACGGTGACCATGGACACCGTGGCGCAGATCCAGTCGCACCTGCTGGCCCACCAGTATGAGGG
CCTGATCAAGAAGTCGAAGCTGCGCGGCGGACGCGGCCGCTAA

Upstream 100 bases:

>100_bases
AGAGCGTGATCGACGCCGAAGCGGTATTGGCTTTCGACGATCGTGCTCCTGAGTCGTGGGGATCTGAATGGCCTCGGCCG
CCGAACAACTCGCAGCCAAT

Downstream 100 bases:

>100_bases
GGCGGGCTTCAATTTTATTACAAGCGTCGGAAGCCGGTTTGTCACAAAACCGGCTTCCGTTTTTATTGCCGGGGCTCTAG
GTCTGCTCCGGGAGACAGCC

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MNFASFQKATELHKRIWFTIIALIVYRLGTYVPIPGVDPTAFASLFSQNSKGLLGMFDMFSGGAVERMAIFSLNVMPYIS
ASIIVQLMGTVYPPWEKLKKEGGEAGRKTLNQYTRYLAVILAVVQSASIAIGIAAQPGVVADGVGHTFFIVSTIVALTGG
TMFLMWLGEQITSRGVGNGVSLIIFAGIVASLPIKLMQMLTQAQSNNNYLPLFLVVFGGIAAILAIVFIERSQRRLLVHY
PKRQQGNRMIGGESSFMPLKINTAGVIPPIFASSLLLLPTTALQLVQTANLPGWASWLPAMVGALQHGQPAFLALYALLI
IFFSFFYTSVVFNPDETAENLRKYGGFLPGIRPGKRTAEYLDYVLTRLTVIGAAYITAVCIAPEFVMMAMNSTQFALGGT
SILIVVTVTMDTVAQIQSHLLAHQYEGLIKKSKLRGGRGR

Sequences:

>Translated_440_residues
MNFASFQKATELHKRIWFTIIALIVYRLGTYVPIPGVDPTAFASLFSQNSKGLLGMFDMFSGGAVERMAIFSLNVMPYIS
ASIIVQLMGTVYPPWEKLKKEGGEAGRKTLNQYTRYLAVILAVVQSASIAIGIAAQPGVVADGVGHTFFIVSTIVALTGG
TMFLMWLGEQITSRGVGNGVSLIIFAGIVASLPIKLMQMLTQAQSNNNYLPLFLVVFGGIAAILAIVFIERSQRRLLVHY
PKRQQGNRMIGGESSFMPLKINTAGVIPPIFASSLLLLPTTALQLVQTANLPGWASWLPAMVGALQHGQPAFLALYALLI
IFFSFFYTSVVFNPDETAENLRKYGGFLPGIRPGKRTAEYLDYVLTRLTVIGAAYITAVCIAPEFVMMAMNSTQFALGGT
SILIVVTVTMDTVAQIQSHLLAHQYEGLIKKSKLRGGRGR
>Mature_440_residues
MNFASFQKATELHKRIWFTIIALIVYRLGTYVPIPGVDPTAFASLFSQNSKGLLGMFDMFSGGAVERMAIFSLNVMPYIS
ASIIVQLMGTVYPPWEKLKKEGGEAGRKTLNQYTRYLAVILAVVQSASIAIGIAAQPGVVADGVGHTFFIVSTIVALTGG
TMFLMWLGEQITSRGVGNGVSLIIFAGIVASLPIKLMQMLTQAQSNNNYLPLFLVVFGGIAAILAIVFIERSQRRLLVHY
PKRQQGNRMIGGESSFMPLKINTAGVIPPIFASSLLLLPTTALQLVQTANLPGWASWLPAMVGALQHGQPAFLALYALLI
IFFSFFYTSVVFNPDETAENLRKYGGFLPGIRPGKRTAEYLDYVLTRLTVIGAAYITAVCIAPEFVMMAMNSTQFALGGT
SILIVVTVTMDTVAQIQSHLLAHQYEGLIKKSKLRGGRGR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=438, Percent_Identity=50.6849315068493, Blast_Score=387, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47816; Mature: 47816

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFASFQKATELHKRIWFTIIALIVYRLGTYVPIPGVDPTAFASLFSQNSKGLLGMFDMF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHC
SGGAVERMAIFSLNVMPYISASIIVQLMGTVYPPWEKLKKEGGEAGRKTLNQYTRYLAVI
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH
LAVVQSASIAIGIAAQPGVVADGVGHTFFIVSTIVALTGGTMFLMWLGEQITSRGVGNGV
HHHHHCCCEEEEEECCCCCEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCH
SLIIFAGIVASLPIKLMQMLTQAQSNNNYLPLFLVVFGGIAAILAIVFIERSQRRLLVHY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
PKRQQGNRMIGGESSFMPLKINTAGVIPPIFASSLLLLPTTALQLVQTANLPGWASWLPA
CCCCCCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
MVGALQHGQPAFLALYALLIIFFSFFYTSVVFNPDETAENLRKYGGFLPGIRPGKRTAEY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHH
LDYVLTRLTVIGAAYITAVCIAPEFVMMAMNSTQFALGGTSILIVVTVTMDTVAQIQSHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEEEHHHHHHHHHHHH
LAHQYEGLIKKSKLRGGRGR
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNFASFQKATELHKRIWFTIIALIVYRLGTYVPIPGVDPTAFASLFSQNSKGLLGMFDMF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHC
SGGAVERMAIFSLNVMPYISASIIVQLMGTVYPPWEKLKKEGGEAGRKTLNQYTRYLAVI
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH
LAVVQSASIAIGIAAQPGVVADGVGHTFFIVSTIVALTGGTMFLMWLGEQITSRGVGNGV
HHHHHCCCEEEEEECCCCCEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCH
SLIIFAGIVASLPIKLMQMLTQAQSNNNYLPLFLVVFGGIAAILAIVFIERSQRRLLVHY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
PKRQQGNRMIGGESSFMPLKINTAGVIPPIFASSLLLLPTTALQLVQTANLPGWASWLPA
CCCCCCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
MVGALQHGQPAFLALYALLIIFFSFFYTSVVFNPDETAENLRKYGGFLPGIRPGKRTAEY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHH
LDYVLTRLTVIGAAYITAVCIAPEFVMMAMNSTQFALGGTSILIVVTVTMDTVAQIQSHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEEEHHHHHHHHHHHH
LAHQYEGLIKKSKLRGGRGR
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]