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The map label for this gene is ydeP [H]

Identifier: 16125492

GI number: 16125492

Start: 1400482

End: 1402770

Strand: Direct

Name: ydeP [H]

Synonym: CC_1243

Alternate gene names: 16125492

Gene position: 1400482-1402770 (Clockwise)

Preceding gene: 16125491

Following gene: 16125493

Centisome position: 34.86

GC content: 68.81

Gene sequence:

>2289_bases
ATGTCGGATCCCAAGATCCCCGGCGTCCGCGACTATGACGCCCCCGCCGGCGGCTGGGGCGCGCTGAAGGCCGTGGCCGG
CGCGCTGGCCGACCAGGAGACGGTGATCGAGGGCGGCAAGACCCTGCTGCGCGCCAACCAGCCGGAGGGCTTCGACTGCC
CCGGCTGCGCCTGGCCCGATCCCAAGCACACCTCGTCATTCGAGTTCTGTGAGAACGGCGCCAAGGCCGTGGCCTGGGAG
GCGACGACCAAGCGCGCCACGCCAGAGGTCTTCGCCCGCCACACGGTCAGTGAGCTCCTGACCTGGAGCGATCACCAGAT
CGAGGACCTGGGCCGCCTGACCGAGCCGATGGCCTATGACCCGGCCGACGATCGCTACAAGGCGATCCCTTGGGACGAGG
CGTTCTCGCGGGCCGGCGCGGCGCTGAAGGCCTTGAGCGACCCGAACCAGGCCGAGTTCTACGCCTCAGGCCGCGCGTCG
AACGAGGCGGCGTTCCTGTACCAGCTGCTGGGCCGACGGTTCGGGACCAACAATTTTCCCGACTGCTCGAACATGTGCCA
CGAGCCCACAAGCGTGGGCCTGCCGGACTCGATCGGCCTGGGCAAGGGCTCGGTGACGCTGGAGGATTTCGACCACGCCG
ACCTGATCCTGTGTTTCGGCCACAACCCCGGCACCAACCATCCGCGCATGATGGCCACCCTGCGCGAGGCCAGCCGGCGC
GGCGCGACCATTCTGGCCTTCAATCCCTTGAAAGAGCGCTCGCTGGAGCGCTTCGCCTCGCCGCAAGACGCCGTCGAGAT
GGCGACTTTGGGATCCACGCCCATCGCCTCGGCCTATTATCAGGTGACGATCGGCGGCGACGCCATGCTGGTCCAGGGCA
TGATGAAGGCGCTGCTGGCGATGGAAGCCCAGGGCGGCGGCGTCCTCGACCACGCTTTCATCGCCGAGCACACTGCCGGC
TTCGAGGCGCTCATGGCGCAGCTCGAGGCCCTGGACTGGTCGGTGATCGAGGCCGGCAGCGGCCTGTCGCGCGCCCGGAT
CGAGGAGGCCGCCGTCGTCTACGCCAAGTCCAAGGCCGCCATCCTCTGCTACGGCATGGGCCTGACCCAGCATCGCGACA
GCTCCGGGACCGTGCAGCAGCTGGTCAATCTGCTGCTGCTGAAGGGCAATATCGGTCGGCCGGGCGCGGGCATCTGTCCG
CTGCGAGGCCACTCGAACGTCCAGGGCGCACGGACCGTCGGGGTCTGGGAAAAGCCCCCGGCCGCGCTGCTGGACTCGCT
CCGCGACGTCTTCGGCTTCGAACCGCCACGCGTCCACGGCCATACGGTGGTCGAGGCGATCGCGGCGATGGAGCAGGGCA
GGGCCAAGGTGTTCGTCGGCCTAGGCGGCAACTTCGCCGTCGCCGCGCCCGATCCGACCCGCACCTTCGCGGCCATGCGC
CAGCTCGATATGGCGGTGCATATCGCCACCAAGCCCAATCGCACGCACCTGCTGGTCGGCAAGGCGGCGCTGCTGCTGCC
TTGCCTGGGACGGACCGAGATGGATATGCGCGGCGGCGTGCGCCAGTCTGTGACGGTCGAGGACTCGATGTCGATGGTCC
ACGCCTCGCGCGGTCTCAACCCGCCGGCGTCGGAGCATCTGCTGTCCGAGCCGGCGATCGTGGCGGGGCTGGCCGAGACG
GTCTTCGGCCGCGACCCCCTGATCGACTGGGGCGGTCTGGCCAACGACTATGACGCCGTACGGGCGCTGATCGCGGGCGT
CTTCCCTTCGGCCTTCGCGGACTACAACGACAGGGTCCGTGTCCCCGGCGGCTTCCGGCTGCCGGTCGGCCCCTCGGACC
GGGTCTGGCGCACCGCCAGCGGCAAGGCCAACTTCCTGGTCTTTGACCCGAAGGGCGGCGATCCGCGTCGGGGCGATCCT
GACGTCCTGCTGCTGACGACCCTGCGCAGTCACGACCAGTACAACACCACGGTCTATGGCCAGGATGATCGTTACCGGGG
CGTGTTCGGACGACGCGACGTGGTGTTCGCCAATCCCGACGACATGGCGCGGCTGGGCCTGGAGGCCGGGGCCAAGGTTG
ACCTCCTCGCGGCGTTTGATGACGGCGGCGCCCGGATTGCGCGCGGCTTTACGCTTGTGGCGCGCGACATCCCGCCGGGC
TGCCTGGCCGCCTATTATCCCGAGACCAATGTGGTCATCGCGCTGGACGACCACGATCTGCGTTCAGGGACGCCGGCCTA
CAAGTCCGCTCCGGTGCGGCTGCGCAAGCACGAGGCGGGTCTCAACTAA

Upstream 100 bases:

>100_bases
AAGCGGCCAACCTGACCCTGGTGGCGCTGGCGCGCGCGGATGGCCACGCGGTGTTCGCCGGCGAGGAGCGGCTCGTGGTC
GCCGAAATGGAGACCGTCTG

Downstream 100 bases:

>100_bases
AGCGGTTGTTAGGATGCTTAAGGCCTAATGCGCGCTCTGGGGGGAGGGACCCGTTGCAGGCCGACCGTATCAAGGTTGAG
GTTGTCGATATCGCTGGACT

Product: CbbBc protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 762; Mature: 761

Protein sequence:

>762_residues
MSDPKIPGVRDYDAPAGGWGALKAVAGALADQETVIEGGKTLLRANQPEGFDCPGCAWPDPKHTSSFEFCENGAKAVAWE
ATTKRATPEVFARHTVSELLTWSDHQIEDLGRLTEPMAYDPADDRYKAIPWDEAFSRAGAALKALSDPNQAEFYASGRAS
NEAAFLYQLLGRRFGTNNFPDCSNMCHEPTSVGLPDSIGLGKGSVTLEDFDHADLILCFGHNPGTNHPRMMATLREASRR
GATILAFNPLKERSLERFASPQDAVEMATLGSTPIASAYYQVTIGGDAMLVQGMMKALLAMEAQGGGVLDHAFIAEHTAG
FEALMAQLEALDWSVIEAGSGLSRARIEEAAVVYAKSKAAILCYGMGLTQHRDSSGTVQQLVNLLLLKGNIGRPGAGICP
LRGHSNVQGARTVGVWEKPPAALLDSLRDVFGFEPPRVHGHTVVEAIAAMEQGRAKVFVGLGGNFAVAAPDPTRTFAAMR
QLDMAVHIATKPNRTHLLVGKAALLLPCLGRTEMDMRGGVRQSVTVEDSMSMVHASRGLNPPASEHLLSEPAIVAGLAET
VFGRDPLIDWGGLANDYDAVRALIAGVFPSAFADYNDRVRVPGGFRLPVGPSDRVWRTASGKANFLVFDPKGGDPRRGDP
DVLLLTTLRSHDQYNTTVYGQDDRYRGVFGRRDVVFANPDDMARLGLEAGAKVDLLAAFDDGGARIARGFTLVARDIPPG
CLAAYYPETNVVIALDDHDLRSGTPAYKSAPVRLRKHEAGLN

Sequences:

>Translated_762_residues
MSDPKIPGVRDYDAPAGGWGALKAVAGALADQETVIEGGKTLLRANQPEGFDCPGCAWPDPKHTSSFEFCENGAKAVAWE
ATTKRATPEVFARHTVSELLTWSDHQIEDLGRLTEPMAYDPADDRYKAIPWDEAFSRAGAALKALSDPNQAEFYASGRAS
NEAAFLYQLLGRRFGTNNFPDCSNMCHEPTSVGLPDSIGLGKGSVTLEDFDHADLILCFGHNPGTNHPRMMATLREASRR
GATILAFNPLKERSLERFASPQDAVEMATLGSTPIASAYYQVTIGGDAMLVQGMMKALLAMEAQGGGVLDHAFIAEHTAG
FEALMAQLEALDWSVIEAGSGLSRARIEEAAVVYAKSKAAILCYGMGLTQHRDSSGTVQQLVNLLLLKGNIGRPGAGICP
LRGHSNVQGARTVGVWEKPPAALLDSLRDVFGFEPPRVHGHTVVEAIAAMEQGRAKVFVGLGGNFAVAAPDPTRTFAAMR
QLDMAVHIATKPNRTHLLVGKAALLLPCLGRTEMDMRGGVRQSVTVEDSMSMVHASRGLNPPASEHLLSEPAIVAGLAET
VFGRDPLIDWGGLANDYDAVRALIAGVFPSAFADYNDRVRVPGGFRLPVGPSDRVWRTASGKANFLVFDPKGGDPRRGDP
DVLLLTTLRSHDQYNTTVYGQDDRYRGVFGRRDVVFANPDDMARLGLEAGAKVDLLAAFDDGGARIARGFTLVARDIPPG
CLAAYYPETNVVIALDDHDLRSGTPAYKSAPVRLRKHEAGLN
>Mature_761_residues
SDPKIPGVRDYDAPAGGWGALKAVAGALADQETVIEGGKTLLRANQPEGFDCPGCAWPDPKHTSSFEFCENGAKAVAWEA
TTKRATPEVFARHTVSELLTWSDHQIEDLGRLTEPMAYDPADDRYKAIPWDEAFSRAGAALKALSDPNQAEFYASGRASN
EAAFLYQLLGRRFGTNNFPDCSNMCHEPTSVGLPDSIGLGKGSVTLEDFDHADLILCFGHNPGTNHPRMMATLREASRRG
ATILAFNPLKERSLERFASPQDAVEMATLGSTPIASAYYQVTIGGDAMLVQGMMKALLAMEAQGGGVLDHAFIAEHTAGF
EALMAQLEALDWSVIEAGSGLSRARIEEAAVVYAKSKAAILCYGMGLTQHRDSSGTVQQLVNLLLLKGNIGRPGAGICPL
RGHSNVQGARTVGVWEKPPAALLDSLRDVFGFEPPRVHGHTVVEAIAAMEQGRAKVFVGLGGNFAVAAPDPTRTFAAMRQ
LDMAVHIATKPNRTHLLVGKAALLLPCLGRTEMDMRGGVRQSVTVEDSMSMVHASRGLNPPASEHLLSEPAIVAGLAETV
FGRDPLIDWGGLANDYDAVRALIAGVFPSAFADYNDRVRVPGGFRLPVGPSDRVWRTASGKANFLVFDPKGGDPRRGDPD
VLLLTTLRSHDQYNTTVYGQDDRYRGVFGRRDVVFANPDDMARLGLEAGAKVDLLAAFDDGGARIARGFTLVARDIPPGC
LAAYYPETNVVIALDDHDLRSGTPAYKSAPVRLRKHEAGLN

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=753, Percent_Identity=52.191235059761, Blast_Score=797, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=308, Percent_Identity=31.4935064935065, Blast_Score=153, Evalue=5e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 81750; Mature: 81619

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPKIPGVRDYDAPAGGWGALKAVAGALADQETVIEGGKTLLRANQPEGFDCPGCAWPD
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCEEEECCCCCCCCCCCCCCCC
PKHTSSFEFCENGAKAVAWEATTKRATPEVFARHTVSELLTWSDHQIEDLGRLTEPMAYD
CCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
PADDRYKAIPWDEAFSRAGAALKALSDPNQAEFYASGRASNEAAFLYQLLGRRFGTNNFP
CCCCCEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC
DCSNMCHEPTSVGLPDSIGLGKGSVTLEDFDHADLILCFGHNPGTNHPRMMATLREASRR
CHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHC
GATILAFNPLKERSLERFASPQDAVEMATLGSTPIASAYYQVTIGGDAMLVQGMMKALLA
CCEEEEECCHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
MEAQGGGVLDHAFIAEHTAGFEALMAQLEALDWSVIEAGSGLSRARIEEAAVVYAKSKAA
HHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHEEECCCCCCHHHHHHHEEEEECCCCE
ILCYGMGLTQHRDSSGTVQQLVNLLLLKGNIGRPGAGICPLRGHSNVQGARTVGVWEKPP
EEEEECCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCH
AALLDSLRDVFGFEPPRVHGHTVVEAIAAMEQGRAKVFVGLGGNFAVAAPDPTRTFAAMR
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCHHHHHHHH
QLDMAVHIATKPNRTHLLVGKAALLLPCLGRTEMDMRGGVRQSVTVEDSMSMVHASRGLN
HHCEEEEEECCCCCEEEEECHHHHHHHCCCCCCHHHCCCCCCEEEHHHHHHHHHHHCCCC
PPASEHLLSEPAIVAGLAETVFGRDPLIDWGGLANDYDAVRALIAGVFPSAFADYNDRVR
CCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE
VPGGFRLPVGPSDRVWRTASGKANFLVFDPKGGDPRRGDPDVLLLTTLRSHDQYNTTVYG
CCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEC
QDDRYRGVFGRRDVVFANPDDMARLGLEAGAKVDLLAAFDDGGARIARGFTLVARDIPPG
CCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCEEEEEEECCCCCEECCCEEEEEECCCCH
CLAAYYPETNVVIALDDHDLRSGTPAYKSAPVRLRKHEAGLN
HEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure 
SDPKIPGVRDYDAPAGGWGALKAVAGALADQETVIEGGKTLLRANQPEGFDCPGCAWPD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCEEEECCCCCCCCCCCCCCCC
PKHTSSFEFCENGAKAVAWEATTKRATPEVFARHTVSELLTWSDHQIEDLGRLTEPMAYD
CCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
PADDRYKAIPWDEAFSRAGAALKALSDPNQAEFYASGRASNEAAFLYQLLGRRFGTNNFP
CCCCCEECCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC
DCSNMCHEPTSVGLPDSIGLGKGSVTLEDFDHADLILCFGHNPGTNHPRMMATLREASRR
CHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHC
GATILAFNPLKERSLERFASPQDAVEMATLGSTPIASAYYQVTIGGDAMLVQGMMKALLA
CCEEEEECCHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
MEAQGGGVLDHAFIAEHTAGFEALMAQLEALDWSVIEAGSGLSRARIEEAAVVYAKSKAA
HHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHEEECCCCCCHHHHHHHEEEEECCCCE
ILCYGMGLTQHRDSSGTVQQLVNLLLLKGNIGRPGAGICPLRGHSNVQGARTVGVWEKPP
EEEEECCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCH
AALLDSLRDVFGFEPPRVHGHTVVEAIAAMEQGRAKVFVGLGGNFAVAAPDPTRTFAAMR
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCHHHHHHHH
QLDMAVHIATKPNRTHLLVGKAALLLPCLGRTEMDMRGGVRQSVTVEDSMSMVHASRGLN
HHCEEEEEECCCCCEEEEECHHHHHHHCCCCCCHHHCCCCCCEEEHHHHHHHHHHHCCCC
PPASEHLLSEPAIVAGLAETVFGRDPLIDWGGLANDYDAVRALIAGVFPSAFADYNDRVR
CCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE
VPGGFRLPVGPSDRVWRTASGKANFLVFDPKGGDPRRGDPDVLLLTTLRSHDQYNTTVYG
CCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEC
QDDRYRGVFGRRDVVFANPDDMARLGLEAGAKVDLLAAFDDGGARIARGFTLVARDIPPG
CCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCEEEEEEECCCCCEECCCEEEEEECCCCH
CLAAYYPETNVVIALDDHDLRSGTPAYKSAPVRLRKHEAGLN
HEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]