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The map label for this gene is fdhD [H]

Identifier: 16125491

GI number: 16125491

Start: 1399586

End: 1400482

Strand: Direct

Name: fdhD [H]

Synonym: CC_1242

Alternate gene names: 16125491

Gene position: 1399586-1400482 (Clockwise)

Preceding gene: 16125490

Following gene: 16125492

Centisome position: 34.84

GC content: 71.68

Gene sequence:

>897_bases
TTGCTCATCAAGGGCGGGGGCGAAAGCGCTCGCGACGGCCGCTGTACCGCTCGGCGCCGTCGGAGTAGGCTCCCCGCCAT
GTCGCGTTCCGTCGCCGATCCCCGTCCCGCCCTGCAGTGGCGCGCCGATCAGGCCGTGCGGCCGATCGAGCGGATCACGC
CGCAGGAGATCGCCGTCGGCCTGTCGTTCGACGGTCGCCCGCACACAGTGCTGATGGCCTCGCCGGAGGGTCTGGAAGAC
CTGGCGCGCGGCTTTGTCGTCACCGAAGCGGTGGCCGCCGCCCAGGATATCGCCGCGATCGACATTCGAAGCGAAGAGCA
GGGTGTCCTGGTCGATGTCCGCTTCCACCCTGGCGCCGGCCCCCGCAAGGCTCGGCCGCGCAATCTGGAAGGGCGGTCCA
GCTGCGGGCTGTGCGGCGTGGAGCGCCTGGCCGACGCCGTGCGCCCGCTGCCGGTGCTGGCGGCCTCGGACGTGACCCTG
GCGCACGCCGTCATCCCGCACGCCCTGGCGAGGCTGGAGGTTGAGCAGGCCCTGGGCCGCCTGACCCGCGCCACCCACGC
CGCGGCGTTCTTCTCGCTGGATGGCGATCTGGTGTTGCTGCGCGAGGACGTCGGTCGCCACAACGCGCTGGACAAGCTGG
CCGGCGGACTGCTGGGCGATGGGCATGACCCGACCGCCGGTTTCGTCGTGGTGACCAGCCGCTGCTCGTTCGAGATGGTC
GAAAAGACCGTGCGGATGGGCTGTCCGATCCTGGTGGCGGTCTCGGCGCCGACCGCCTTGGCCATCGACCGGGCGCAAGC
GGCCAACCTGACCCTGGTGGCGCTGGCGCGCGCGGATGGCCACGCGGTGTTCGCCGGCGAGGAGCGGCTCGTGGTCGCCG
AAATGGAGACCGTCTGA

Upstream 100 bases:

>100_bases
CGCGAAGCGCCGGTGGGGGAAGTTCTGTTGAGCGGGCCTCTTCCCCCTCCGTCGGCTGCGCCGACACCTCCCCCGCTGGG
GGGAGGATTGTCTTCGGCCC

Downstream 100 bases:

>100_bases
TGTCGGATCCCAAGATCCCCGGCGTCCGCGACTATGACGCCCCCGCCGGCGGCTGGGGCGCGCTGAAGGCCGTGGCCGGC
GCGCTGGCCGACCAGGAGAC

Product: FdhD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MLIKGGGESARDGRCTARRRRSRLPAMSRSVADPRPALQWRADQAVRPIERITPQEIAVGLSFDGRPHTVLMASPEGLED
LARGFVVTEAVAAAQDIAAIDIRSEEQGVLVDVRFHPGAGPRKARPRNLEGRSSCGLCGVERLADAVRPLPVLAASDVTL
AHAVIPHALARLEVEQALGRLTRATHAAAFFSLDGDLVLLREDVGRHNALDKLAGGLLGDGHDPTAGFVVVTSRCSFEMV
EKTVRMGCPILVAVSAPTALAIDRAQAANLTLVALARADGHAVFAGEERLVVAEMETV

Sequences:

>Translated_298_residues
MLIKGGGESARDGRCTARRRRSRLPAMSRSVADPRPALQWRADQAVRPIERITPQEIAVGLSFDGRPHTVLMASPEGLED
LARGFVVTEAVAAAQDIAAIDIRSEEQGVLVDVRFHPGAGPRKARPRNLEGRSSCGLCGVERLADAVRPLPVLAASDVTL
AHAVIPHALARLEVEQALGRLTRATHAAAFFSLDGDLVLLREDVGRHNALDKLAGGLLGDGHDPTAGFVVVTSRCSFEMV
EKTVRMGCPILVAVSAPTALAIDRAQAANLTLVALARADGHAVFAGEERLVVAEMETV
>Mature_298_residues
MLIKGGGESARDGRCTARRRRSRLPAMSRSVADPRPALQWRADQAVRPIERITPQEIAVGLSFDGRPHTVLMASPEGLED
LARGFVVTEAVAAAQDIAAIDIRSEEQGVLVDVRFHPGAGPRKARPRNLEGRSSCGLCGVERLADAVRPLPVLAASDVTL
AHAVIPHALARLEVEQALGRLTRATHAAAFFSLDGDLVLLREDVGRHNALDKLAGGLLGDGHDPTAGFVVVTSRCSFEMV
EKTVRMGCPILVAVSAPTALAIDRAQAANLTLVALARADGHAVFAGEERLVVAEMETV

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=260, Percent_Identity=39.6153846153846, Blast_Score=152, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 31638; Mature: 31638

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKGGGESARDGRCTARRRRSRLPAMSRSVADPRPALQWRADQAVRPIERITPQEIAVG
CEECCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCHHHCCCHHHCCHHHHCCCCCEEEE
LSFDGRPHTVLMASPEGLEDLARGFVVTEAVAAAQDIAAIDIRSEEQGVLVDVRFHPGAG
EECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEECCCCC
PRKARPRNLEGRSSCGLCGVERLADAVRPLPVLAASDVTLAHAVIPHALARLEVEQALGR
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LTRATHAAAFFSLDGDLVLLREDVGRHNALDKLAGGLLGDGHDPTAGFVVVTSRCSFEMV
HHHHHHHHEEEECCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHH
EKTVRMGCPILVAVSAPTALAIDRAQAANLTLVALARADGHAVFAGEERLVVAEMETV
HHHHHCCCCEEEEECCCCEEEECCCCCCCEEEEEEEECCCCEEEECCCEEEEEEECCC
>Mature Secondary Structure
MLIKGGGESARDGRCTARRRRSRLPAMSRSVADPRPALQWRADQAVRPIERITPQEIAVG
CEECCCCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCHHHCCCHHHCCHHHHCCCCCEEEE
LSFDGRPHTVLMASPEGLEDLARGFVVTEAVAAAQDIAAIDIRSEEQGVLVDVRFHPGAG
EECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEECCCCC
PRKARPRNLEGRSSCGLCGVERLADAVRPLPVLAASDVTLAHAVIPHALARLEVEQALGR
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LTRATHAAAFFSLDGDLVLLREDVGRHNALDKLAGGLLGDGHDPTAGFVVVTSRCSFEMV
HHHHHHHHEEEECCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHH
EKTVRMGCPILVAVSAPTALAIDRAQAANLTLVALARADGHAVFAGEERLVVAEMETV
HHHHHCCCCEEEEECCCCEEEECCCCCCCEEEEEEEECCCCEEEECCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]