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The map label for this gene is xyoA [H]

Identifier: 16125469

GI number: 16125469

Start: 1377010

End: 1378416

Strand: Direct

Name: xyoA [H]

Synonym: CC_1219

Alternate gene names: 16125469

Gene position: 1377010-1378416 (Clockwise)

Preceding gene: 16125468

Following gene: 16125472

Centisome position: 34.28

GC content: 69.37

Gene sequence:

>1407_bases
ATGATCTCGCGGCGTGGGGCTCTGATCGCAGGCGGAACGGGAGCGGCGGTGGTCGCCGGCGGCGCGGGCGCCGCCTACAT
GGTCGCCACCGGAGACAAGCCCGAGCCGCCGGCGCCCGCTTCGGTCAATGCGCAGGGCAAGGTGCTTTGGCGCAACTGGT
CGGGTGTCCAGCACGCCTATCCCGCCGCGCGCCTGGCCCCCAAGGACGAGGGCGAGCTGGCCACCGCGCTGAAGGTCGCC
CAGGCCCCGATCCGGCCCGTCGGCTCGGGCCACTCCTTCACGGCCCTGGCCCCGACCGACGGCACGCTGGTTTCGCTGGA
CTCGATGTCGGGGATCGTCGGCTGGGAGGGTGACGAGGCCATTGTGCGCGCGGGCACCCGCCTGGGCGCCTTGGGGCCGC
TCCTGGCCGAGAAGGGGCGGGCTCTGGCCAACCTGCCCGACATCAACAAGCAGTCGCTGGGCGGCGCCCTGGGCACGGCG
ACCCACGGCACGGGGATCAAGATCCCGGCCATGCACGGCGACGTGACGGGCCTGCGGCTGGTCACGCCCTCGGGCAAGAT
CATCGACGCCGACGCCAGCAACAACCCCGAGATCTTCCAGGCCGCCCGCGTTTCGATGGGCGCGCTGGGGGTGATCAGCC
AGGTTCGGATGCGCACCAGCGCCAACCGCCGCCTGCGTCGCCGTGTCTGGCTGGAGCCCTTCGAGGAGGCCATGGCCAAG
GCCGATGGCCGCTGGGCCCAGCATCGCAATTTCGAGTTCTATGCCGTCCCGTTCACCGGGCTGGCGGTGAACATCACCCA
CGACGAGACCGACGATCCAGCCGAGGCGCGCGGGCCTGACCAGGACGTGGAGTTCCTGCAGGCGTTGCGGGGCTTGCGGA
ACCTGCTGGGCTTCGCCACGCCGCTGCGCAAGGCGGCGGCCAAGGCGCTGCTGTCCTCGGCCAAGCCCGAAAGCTCCGTC
GACGAGGGCTGGAAGCTGCTCTCGACCGAACGTCCGGTGCGCTTCAACGAGATGGAGTTCCATCTTCCGGTCGAGAACCA
GCTGAAGGCCCTGGAAGAGGTGATGCGGACCATCGAGACCGAACGGCCCGACGTGTTCTTCCCGATCGAGGTTCGCCGTA
TCGCGGCCGATGACGCCTGGCTCTCGCCCTTTTACGCCGCGCCGCGCGGGTCCGTGGCGGTCCACGCCTACTACCGCGAC
GACTTCACCTTCCTGTACGAGCTCATCGAGCCCATCTTCCGCCGCTACGAGGGGCGTCCGCACTGGGGCAAGCTCCACAC
GCTGCGCGGCCGGCAGCTGGAAGCGATCTATCCGCGCTGGAAGGATTTCCTGGAGGTTCGCCAGGACCTGGACCCTGAGG
CGCGGATGCTCAACCCGTACCTCAAGGGCCTGTTTGGTCTGATGTGA

Upstream 100 bases:

>100_bases
ACCGGCCAATGCGCGACTTGCACGCCGGACGATTTCAAGGCCCTGATACGCTTTATGGCGGGGCGAGACGACTCCGCGTC
TTAAGATACGGGGAGGCGGC

Downstream 100 bases:

>100_bases
TCAGCCGGCGGCGCCGAGATACTCGGCGACCCGCGCTTCGAGTTCGGTGCTCAGGGCCTTGCCGACCGGGTGGGTGTCGA
CCTTGATGTCGTCCCGCACG

Product: oxidoreductase, FAD-binding

Products: NA

Alternate protein names: Alditol oxidase [H]

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MISRRGALIAGGTGAAVVAGGAGAAYMVATGDKPEPPAPASVNAQGKVLWRNWSGVQHAYPAARLAPKDEGELATALKVA
QAPIRPVGSGHSFTALAPTDGTLVSLDSMSGIVGWEGDEAIVRAGTRLGALGPLLAEKGRALANLPDINKQSLGGALGTA
THGTGIKIPAMHGDVTGLRLVTPSGKIIDADASNNPEIFQAARVSMGALGVISQVRMRTSANRRLRRRVWLEPFEEAMAK
ADGRWAQHRNFEFYAVPFTGLAVNITHDETDDPAEARGPDQDVEFLQALRGLRNLLGFATPLRKAAAKALLSSAKPESSV
DEGWKLLSTERPVRFNEMEFHLPVENQLKALEEVMRTIETERPDVFFPIEVRRIAADDAWLSPFYAAPRGSVAVHAYYRD
DFTFLYELIEPIFRRYEGRPHWGKLHTLRGRQLEAIYPRWKDFLEVRQDLDPEARMLNPYLKGLFGLM

Sequences:

>Translated_468_residues
MISRRGALIAGGTGAAVVAGGAGAAYMVATGDKPEPPAPASVNAQGKVLWRNWSGVQHAYPAARLAPKDEGELATALKVA
QAPIRPVGSGHSFTALAPTDGTLVSLDSMSGIVGWEGDEAIVRAGTRLGALGPLLAEKGRALANLPDINKQSLGGALGTA
THGTGIKIPAMHGDVTGLRLVTPSGKIIDADASNNPEIFQAARVSMGALGVISQVRMRTSANRRLRRRVWLEPFEEAMAK
ADGRWAQHRNFEFYAVPFTGLAVNITHDETDDPAEARGPDQDVEFLQALRGLRNLLGFATPLRKAAAKALLSSAKPESSV
DEGWKLLSTERPVRFNEMEFHLPVENQLKALEEVMRTIETERPDVFFPIEVRRIAADDAWLSPFYAAPRGSVAVHAYYRD
DFTFLYELIEPIFRRYEGRPHWGKLHTLRGRQLEAIYPRWKDFLEVRQDLDPEARMLNPYLKGLFGLM
>Mature_468_residues
MISRRGALIAGGTGAAVVAGGAGAAYMVATGDKPEPPAPASVNAQGKVLWRNWSGVQHAYPAARLAPKDEGELATALKVA
QAPIRPVGSGHSFTALAPTDGTLVSLDSMSGIVGWEGDEAIVRAGTRLGALGPLLAEKGRALANLPDINKQSLGGALGTA
THGTGIKIPAMHGDVTGLRLVTPSGKIIDADASNNPEIFQAARVSMGALGVISQVRMRTSANRRLRRRVWLEPFEEAMAK
ADGRWAQHRNFEFYAVPFTGLAVNITHDETDDPAEARGPDQDVEFLQALRGLRNLLGFATPLRKAAAKALLSSAKPESSV
DEGWKLLSTERPVRFNEMEFHLPVENQLKALEEVMRTIETERPDVFFPIEVRRIAADDAWLSPFYAAPRGSVAVHAYYRD
DFTFLYELIEPIFRRYEGRPHWGKLHTLRGRQLEAIYPRWKDFLEVRQDLDPEARMLNPYLKGLFGLM

Specific function: Catalyzes the oxidation of xylitol to xylose, also acts on D-sorbitol [H]

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323553, Length=241, Percent_Identity=28.6307053941909, Blast_Score=105, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007173
- InterPro:   IPR016166
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF04030 ALO; PF01565 FAD_binding_4 [H]

EC number: =1.1.3.41 [H]

Molecular weight: Translated: 51113; Mature: 51113

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRRGALIAGGTGAAVVAGGAGAAYMVATGDKPEPPAPASVNAQGKVLWRNWSGVQHAY
CCCCCCCEEECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCC
PAARLAPKDEGELATALKVAQAPIRPVGSGHSFTALAPTDGTLVSLDSMSGIVGWEGDEA
CHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCHH
IVRAGTRLGALGPLLAEKGRALANLPDINKQSLGGALGTATHGTGIKIPAMHGDVTGLRL
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCEEEE
VTPSGKIIDADASNNPEIFQAARVSMGALGVISQVRMRTSANRRLRRRVWLEPFEEAMAK
ECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ADGRWAQHRNFEFYAVPFTGLAVNITHDETDDPAEARGPDQDVEFLQALRGLRNLLGFAT
CCCCHHHCCCCEEEEEEECCEEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHH
PLRKAAAKALLSSAKPESSVDEGWKLLSTERPVRFNEMEFHLPVENQLKALEEVMRTIET
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEECCEEEECCHHHHHHHHHHHHHHHCC
ERPDVFFPIEVRRIAADDAWLSPFYAAPRGSVAVHAYYRDDFTFLYELIEPIFRRYEGRP
CCCCEEEEEEEEEEECCCCCCCCHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCC
HWGKLHTLRGRQLEAIYPRWKDFLEVRQDLDPEARMLNPYLKGLFGLM
CCCCEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISRRGALIAGGTGAAVVAGGAGAAYMVATGDKPEPPAPASVNAQGKVLWRNWSGVQHAY
CCCCCCCEEECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCC
PAARLAPKDEGELATALKVAQAPIRPVGSGHSFTALAPTDGTLVSLDSMSGIVGWEGDEA
CHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCHH
IVRAGTRLGALGPLLAEKGRALANLPDINKQSLGGALGTATHGTGIKIPAMHGDVTGLRL
HHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCEEEE
VTPSGKIIDADASNNPEIFQAARVSMGALGVISQVRMRTSANRRLRRRVWLEPFEEAMAK
ECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ADGRWAQHRNFEFYAVPFTGLAVNITHDETDDPAEARGPDQDVEFLQALRGLRNLLGFAT
CCCCHHHCCCCEEEEEEECCEEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHH
PLRKAAAKALLSSAKPESSVDEGWKLLSTERPVRFNEMEFHLPVENQLKALEEVMRTIET
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEECCEEEECCHHHHHHHHHHHHHHHCC
ERPDVFFPIEVRRIAADDAWLSPFYAAPRGSVAVHAYYRDDFTFLYELIEPIFRRYEGRP
CCCCEEEEEEEEEEECCCCCCCCHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCC
HWGKLHTLRGRQLEAIYPRWKDFLEVRQDLDPEARMLNPYLKGLFGLM
CCCCEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]