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The map label for this gene is glf [C]

Identifier: 16125353

GI number: 16125353

Start: 1236865

End: 1238379

Strand: Direct

Name: glf [C]

Synonym: CC_1101

Alternate gene names: 16125353

Gene position: 1236865-1238379 (Clockwise)

Preceding gene: 16125352

Following gene: 16125354

Centisome position: 30.79

GC content: 65.08

Gene sequence:

>1515_bases
TTGGGAGGGGGCCGCATGGGCCAGCACGTGGAAACCCTGGTGATCGGGGCCGGTCCGGCCGGCCTGACCACCGCCTACAC
CCTGGCCAAGGCCGGGCGTGGCGTCACCGTGCTCGAGATGGACGAGACCTATGTCGGCGGCATCAGCCGCACCGTCGACT
ACAAGGGCTTCAAGTTCGATATCGGCGGACACCGTTTCTTTTCCAAGAGCCAGGAGATCGTCGATCTCTGGAACGAGATC
CTGCCCGACGACTTCATCGACCGGCCGCGCCTGTCGCGGATCTATTACCGCGAGAAGTTCTACGCCTATCCCCTGAAGGC
CTTCGAGGCCTTGGCCAATCTGGGCGTCTGGACGGCCGCCAAGTGCATGGCCTCGTTCGGCTGGGCCAAGCTGACCCCGA
TCGCGGCGCCGACCACCTTCCACCAGTGGGTGCGCAATCAGTTCGGCGAGAAGCTGTTTTCGATCTTCTTCAAGACCTAC
ACCGAGAAGGTGTGGGGCATGAGCTGCGACGAGATCTCGGCCGATTGGGCCAGCCAGCGGATCAAGGGCCTGGACCTGGG
CGCGGCGATCATCGACGGCGTCAAGCGCTCGCTGGGCCTGCGCGGCAAGGCCGCCGAGGGTGGTCCCAAGACCCTGATCG
AGAGCTTCCGCTATCCCCGCAAGGGCCCGGGCATGATGTGGGAGGCCTGCGCCGACAAGGTCATGGCCCTGGGCGGCGAC
GTCCGTATGGGCCGCAAGGTCGACGGCCTGCACTTCGACAAGATCGCCAAGCTCTGGACCGTCGCGGTGACCTGCGCCGA
CGGCCGCAAGGAGATCTACACGGCCGACAACGTCGTTTCGTCCGCGCCGATCCGCGAGCTGATGCAGTCGATCAGCCCGA
CGCCGATCAGCGTCTTCCACGCCGGCGAGCTGATGTATCGCGACTTCATCACCGTGGTGCTGATCGGCAAGCCGCAGAAG
GAACTGCCGGACAACTGGATCTATATCCACGACCCGTCGGTGAAGGTCGGCCGCGTGCAGAACTTCCGTTCGTGGTCGCC
GGAGATGATCCCGGACGGCGTCTCGACGTGCCTGGGGCTGGAATACTTCTGCTTTGAGGGTGATGGCCTGTGGGTCACCT
CGGACGAGGAGCTCGTGGCCCAGGCCAAGCGCGAGATCGGCAAGATCGGCCTGATGGCGCCGGCGGACGTCTATGACGCC
TGCGTGGTGCGACAGCACAAGGCCTACCCCGTCTATGACGACGCCTATGCCGAGCACGTCAAGATGATCCGCCTGGACCT
GAAGATGCACTTCCCGGGCCTGCACCTGGTGGGCCGCAACGGTATGCACAAGTACAACAACCAGGACCACGCCATGATGA
CCGGCCTGCTGACGGCCGAGAACATCATCGCCGGCGAGACCCTCCACGATGTCTGGGAGGTCAATGAGGACGCCGAGTAC
GGCGAGGCCGGCGTCTCCGGCGCCCGTCAGGCCCTGCGCAGCGAGCGCGCCGTGCCGACTAAGGTGGCCGCATGA

Upstream 100 bases:

>100_bases
GCGTCCGCGACCAATCGTCTCGCTCGTGCAATTAACCAGAATTCACCACGCGTGAGTACACCGCCTTAACCATCGCGGAC
CATTCTGTACCGGAACGGGA

Downstream 100 bases:

>100_bases
TCTTCACCCTGGCCGGACCGATCTGGCGCCTCCTGCCGGAGGGCTTTCGGGAGCTGATCCTGTATGGCCTGGTCAGCGCC
GCCGCGTTGGCGGTCGACTG

Product: hypothetical protein

Products: UDP-D-galacto-1,4-furanose [C]

Alternate protein names: UDP-Galactopyranose Mutase; FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Amine Oxidase Flavin-Containing Superfamily; Protoporphyrinogen Oxidase-Like Protein; Flavin Containing Amine Oxidoreductase; Amine Oxidase Family Protein; LOW QUALITY PROTEIN Protoporphyrinogen Oxidase; Oxidoreductase; Glycosyl Transferase Family 2 Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase; Flavin-Containing Amine Oxidoreductase Family Protein; Oxidase

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MGGGRMGQHVETLVIGAGPAGLTTAYTLAKAGRGVTVLEMDETYVGGISRTVDYKGFKFDIGGHRFFSKSQEIVDLWNEI
LPDDFIDRPRLSRIYYREKFYAYPLKAFEALANLGVWTAAKCMASFGWAKLTPIAAPTTFHQWVRNQFGEKLFSIFFKTY
TEKVWGMSCDEISADWASQRIKGLDLGAAIIDGVKRSLGLRGKAAEGGPKTLIESFRYPRKGPGMMWEACADKVMALGGD
VRMGRKVDGLHFDKIAKLWTVAVTCADGRKEIYTADNVVSSAPIRELMQSISPTPISVFHAGELMYRDFITVVLIGKPQK
ELPDNWIYIHDPSVKVGRVQNFRSWSPEMIPDGVSTCLGLEYFCFEGDGLWVTSDEELVAQAKREIGKIGLMAPADVYDA
CVVRQHKAYPVYDDAYAEHVKMIRLDLKMHFPGLHLVGRNGMHKYNNQDHAMMTGLLTAENIIAGETLHDVWEVNEDAEY
GEAGVSGARQALRSERAVPTKVAA

Sequences:

>Translated_504_residues
MGGGRMGQHVETLVIGAGPAGLTTAYTLAKAGRGVTVLEMDETYVGGISRTVDYKGFKFDIGGHRFFSKSQEIVDLWNEI
LPDDFIDRPRLSRIYYREKFYAYPLKAFEALANLGVWTAAKCMASFGWAKLTPIAAPTTFHQWVRNQFGEKLFSIFFKTY
TEKVWGMSCDEISADWASQRIKGLDLGAAIIDGVKRSLGLRGKAAEGGPKTLIESFRYPRKGPGMMWEACADKVMALGGD
VRMGRKVDGLHFDKIAKLWTVAVTCADGRKEIYTADNVVSSAPIRELMQSISPTPISVFHAGELMYRDFITVVLIGKPQK
ELPDNWIYIHDPSVKVGRVQNFRSWSPEMIPDGVSTCLGLEYFCFEGDGLWVTSDEELVAQAKREIGKIGLMAPADVYDA
CVVRQHKAYPVYDDAYAEHVKMIRLDLKMHFPGLHLVGRNGMHKYNNQDHAMMTGLLTAENIIAGETLHDVWEVNEDAEY
GEAGVSGARQALRSERAVPTKVAA
>Mature_503_residues
GGGRMGQHVETLVIGAGPAGLTTAYTLAKAGRGVTVLEMDETYVGGISRTVDYKGFKFDIGGHRFFSKSQEIVDLWNEIL
PDDFIDRPRLSRIYYREKFYAYPLKAFEALANLGVWTAAKCMASFGWAKLTPIAAPTTFHQWVRNQFGEKLFSIFFKTYT
EKVWGMSCDEISADWASQRIKGLDLGAAIIDGVKRSLGLRGKAAEGGPKTLIESFRYPRKGPGMMWEACADKVMALGGDV
RMGRKVDGLHFDKIAKLWTVAVTCADGRKEIYTADNVVSSAPIRELMQSISPTPISVFHAGELMYRDFITVVLIGKPQKE
LPDNWIYIHDPSVKVGRVQNFRSWSPEMIPDGVSTCLGLEYFCFEGDGLWVTSDEELVAQAKREIGKIGLMAPADVYDAC
VVRQHKAYPVYDDAYAEHVKMIRLDLKMHFPGLHLVGRNGMHKYNNQDHAMMTGLLTAENIIAGETLHDVWEVNEDAEYG
EAGVSGARQALRSERAVPTKVAA

Specific function: Involved In The Conversion Of UDP-Galp Into UDP-Galf Through A 2-Keto Intermediate. [C]

COG id: COG1232

COG function: function code H; Protoporphyrinogen oxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71990307, Length=483, Percent_Identity=24.8447204968944, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.99.9 [C]

Molecular weight: Translated: 56033; Mature: 55902

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGGRMGQHVETLVIGAGPAGLTTAYTLAKAGRGVTVLEMDETYVGGISRTVDYKGFKFD
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHCCCHHEECCCCEEEE
IGGHRFFSKSQEIVDLWNEILPDDFIDRPRLSRIYYREKFYAYPLKAFEALANLGVWTAA
CCCCHHHHCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KCMASFGWAKLTPIAAPTTFHQWVRNQFGEKLFSIFFKTYTEKVWGMSCDEISADWASQR
HHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IKGLDLGAAIIDGVKRSLGLRGKAAEGGPKTLIESFRYPRKGPGMMWEACADKVMALGGD
HCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
VRMGRKVDGLHFDKIAKLWTVAVTCADGRKEIYTADNVVSSAPIRELMQSISPTPISVFH
CCCCCCCCCCCHHHHHHHHHEEEEECCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEE
AGELMYRDFITVVLIGKPQKELPDNWIYIHDPSVKVGRVQNFRSWSPEMIPDGVSTCLGL
CHHHHHHCEEEEEEECCCHHHCCCCEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHCC
EYFCFEGDGLWVTSDEELVAQAKREIGKIGLMAPADVYDACVVRQHKAYPVYDDAYAEHV
EEEEEECCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH
KMIRLDLKMHFPGLHLVGRNGMHKYNNQDHAMMTGLLTAENIIAGETLHDVWEVNEDAEY
HHHEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC
GEAGVSGARQALRSERAVPTKVAA
CCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GGGRMGQHVETLVIGAGPAGLTTAYTLAKAGRGVTVLEMDETYVGGISRTVDYKGFKFD
CCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHCCCHHEECCCCEEEE
IGGHRFFSKSQEIVDLWNEILPDDFIDRPRLSRIYYREKFYAYPLKAFEALANLGVWTAA
CCCCHHHHCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KCMASFGWAKLTPIAAPTTFHQWVRNQFGEKLFSIFFKTYTEKVWGMSCDEISADWASQR
HHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IKGLDLGAAIIDGVKRSLGLRGKAAEGGPKTLIESFRYPRKGPGMMWEACADKVMALGGD
HCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
VRMGRKVDGLHFDKIAKLWTVAVTCADGRKEIYTADNVVSSAPIRELMQSISPTPISVFH
CCCCCCCCCCCHHHHHHHHHEEEEECCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEEEEE
AGELMYRDFITVVLIGKPQKELPDNWIYIHDPSVKVGRVQNFRSWSPEMIPDGVSTCLGL
CHHHHHHCEEEEEEECCCHHHCCCCEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHCC
EYFCFEGDGLWVTSDEELVAQAKREIGKIGLMAPADVYDACVVRQHKAYPVYDDAYAEHV
EEEEEECCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH
KMIRLDLKMHFPGLHLVGRNGMHKYNNQDHAMMTGLLTAENIIAGETLHDVWEVNEDAEY
HHHEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC
GEAGVSGARQALRSERAVPTKVAA
CCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FAD. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDPgalactose [C]

Specific reaction: UDPgalactose --> UDP-D-galacto-1,4-furanose [C]

General reaction: Group transfer (intramolecular Isomerization) [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA