| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is 16125347
Identifier: 16125347
GI number: 16125347
Start: 1228731
End: 1229726
Strand: Direct
Name: 16125347
Synonym: CC_1095
Alternate gene names: NA
Gene position: 1228731-1229726 (Clockwise)
Preceding gene: 16125346
Following gene: 16125348
Centisome position: 30.59
GC content: 70.88
Gene sequence:
>996_bases ATGACGGGCGGCATGAGACACGAGAAAGCCACCCGCCTTCTGGATCTGGCCCGGATGCTGGCTGGGTCCGCCGAGGGGCT GACCCTGGACGAGATGGCCGCAGCCCTGGGCGTGGGCCGCCGCACCGCAGAGCGCATGCGTGACGCGGTCTGGGCGGCCT TTCCGCAAATGGAGGCGATCGACGATCCGCCGACCAAGCGCTTCCGCATCCCTTCGGGCCTGGACGGCGTCTTTCAGACC CCGACCGCCGAAGAGTTGGCCGCGCTGCGGGTGGCCGCCGACTCGCTGCGCGCCTCCGGCGCAGACGCCCGCGCCTCGTC GCTTTACGCCCTGGAGGCCAAGCTCTTGTCGGCGCTGCGCGGCTCGGCCCGCCGCCGGGTGGCGCCCGATGTCGAGGCCC TGGTCCAGGCCGAAACGATCGCCGTCCACGCCGGCCCACGCCCTTATGAGGACCAGGCCGTGCTGGGCGCGATCCGCGCC GCGATCAAGGGGCTGCAGGCCCTGTCGTTTCGCTATGAAGGCGGCTCCACGCCCGGCCGGACGCGGGAGGTGACGCCGCT GGGCGTGCTGTTCGGCCGCTCCAACTATCTGGTGGCGCTGGAAGGGAAGGGCGGCAAGCCGCGCTCCTGGCGGCTGGACC GGATGAGCGACCTGAAGGTGCTCGACAAGCCCGCCCCGCCGCCGCAGGACTTCTCGCTGCAGGCCTTCGCCGACGAGAGC TTCGGCATCTATCACGACGAGATCCAGGACGTGGTGCTGCGCATCCACAAGAGCCGCGCCGAGGATGCGCTGCGCTGGCG CTTCCACGCGACCCAACAGGTGACGCCGGAGGCGGACGGCTCGGTGCTCGTCACTTTCCGGGCCGGGGGGATGCGCGAGC TGTCCTGGCACCTGTTCACTTGGGGCGATGCGGTGGAGATCGTCGCGCCACAGGTCCTCAAGGACATGATGGTCCAGGAG CTGCGCGAGGCTGGTCGCGCGCACGGGGCGTGGTAG
Upstream 100 bases:
>100_bases ATCGTCCAGGCGGGGCAGGCGAAGCGGGTCATCGAAGGTCCTTGGGTTCTCCAGGGGCGATGATGGAAGATTGTCCGCGC ATTGCGACAGAAACGGTCGT
Downstream 100 bases:
>100_bases GAGCCAGGGCATGAACTACCGCCACGCCTTCCACGCCGGCAACTTCGCCGACCTGCACAAGCACGCGATCCTGCTGGCCA TGCTCTCGGCTCTGCAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Helix-Turn-Helix Type; GntR Family Transcriptional Regulator; Transcriptional Regulator Protein-Like Protein
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MTGGMRHEKATRLLDLARMLAGSAEGLTLDEMAAALGVGRRTAERMRDAVWAAFPQMEAIDDPPTKRFRIPSGLDGVFQT PTAEELAALRVAADSLRASGADARASSLYALEAKLLSALRGSARRRVAPDVEALVQAETIAVHAGPRPYEDQAVLGAIRA AIKGLQALSFRYEGGSTPGRTREVTPLGVLFGRSNYLVALEGKGGKPRSWRLDRMSDLKVLDKPAPPPQDFSLQAFADES FGIYHDEIQDVVLRIHKSRAEDALRWRFHATQQVTPEADGSVLVTFRAGGMRELSWHLFTWGDAVEIVAPQVLKDMMVQE LREAGRAHGAW
Sequences:
>Translated_331_residues MTGGMRHEKATRLLDLARMLAGSAEGLTLDEMAAALGVGRRTAERMRDAVWAAFPQMEAIDDPPTKRFRIPSGLDGVFQT PTAEELAALRVAADSLRASGADARASSLYALEAKLLSALRGSARRRVAPDVEALVQAETIAVHAGPRPYEDQAVLGAIRA AIKGLQALSFRYEGGSTPGRTREVTPLGVLFGRSNYLVALEGKGGKPRSWRLDRMSDLKVLDKPAPPPQDFSLQAFADES FGIYHDEIQDVVLRIHKSRAEDALRWRFHATQQVTPEADGSVLVTFRAGGMRELSWHLFTWGDAVEIVAPQVLKDMMVQE LREAGRAHGAW >Mature_330_residues TGGMRHEKATRLLDLARMLAGSAEGLTLDEMAAALGVGRRTAERMRDAVWAAFPQMEAIDDPPTKRFRIPSGLDGVFQTP TAEELAALRVAADSLRASGADARASSLYALEAKLLSALRGSARRRVAPDVEALVQAETIAVHAGPRPYEDQAVLGAIRAA IKGLQALSFRYEGGSTPGRTREVTPLGVLFGRSNYLVALEGKGGKPRSWRLDRMSDLKVLDKPAPPPQDFSLQAFADESF GIYHDEIQDVVLRIHKSRAEDALRWRFHATQQVTPEADGSVLVTFRAGGMRELSWHLFTWGDAVEIVAPQVLKDMMVQEL REAGRAHGAW
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36163; Mature: 36031
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGGMRHEKATRLLDLARMLAGSAEGLTLDEMAAALGVGRRTAERMRDAVWAAFPQMEAI CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC DDPPTKRFRIPSGLDGVFQTPTAEELAALRVAADSLRASGADARASSLYALEAKLLSALR CCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH GSARRRVAPDVEALVQAETIAVHAGPRPYEDQAVLGAIRAAIKGLQALSFRYEGGSTPGR HHHHHCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCC TREVTPLGVLFGRSNYLVALEGKGGKPRSWRLDRMSDLKVLDKPAPPPQDFSLQAFADES CCCCCCEEEEECCCCEEEEEECCCCCCCCEECCCCCCCHHHCCCCCCCCCCEEEEECCCC FGIYHDEIQDVVLRIHKSRAEDALRWRFHATQQVTPEADGSVLVTFRAGGMRELSWHLFT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEEEE WGDAVEIVAPQVLKDMMVQELREAGRAHGAW CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TGGMRHEKATRLLDLARMLAGSAEGLTLDEMAAALGVGRRTAERMRDAVWAAFPQMEAI CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC DDPPTKRFRIPSGLDGVFQTPTAEELAALRVAADSLRASGADARASSLYALEAKLLSALR CCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH GSARRRVAPDVEALVQAETIAVHAGPRPYEDQAVLGAIRAAIKGLQALSFRYEGGSTPGR HHHHHCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCC TREVTPLGVLFGRSNYLVALEGKGGKPRSWRLDRMSDLKVLDKPAPPPQDFSLQAFADES CCCCCCEEEEECCCCEEEEEECCCCCCCCEECCCCCCCHHHCCCCCCCCCCEEEEECCCC FGIYHDEIQDVVLRIHKSRAEDALRWRFHATQQVTPEADGSVLVTFRAGGMRELSWHLFT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEEEE WGDAVEIVAPQVLKDMMVQELREAGRAHGAW CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA