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The map label for this gene is atoS [C]

Identifier: 16125330

GI number: 16125330

Start: 1209761

End: 1211836

Strand: Direct

Name: atoS [C]

Synonym: CC_1078

Alternate gene names: 16125330

Gene position: 1209761-1211836 (Clockwise)

Preceding gene: 16125329

Following gene: 16125336

Centisome position: 30.12

GC content: 69.85

Gene sequence:

>2076_bases
ATGGCCGACTTGCAGCTCCAGGACAAGGTTTCGACCGGCGCCCCGCGTCGGCGGTTTGATCCATGGCTGGTCGGCGCGGC
GGTGTTTTTCGTGGCTGCGGCGGCCCTCTCGGCGGCGCCGGCGCTCAAGGCCGGACCGACCACCCTGGCCGGCCTGCTGC
TGCTTCTGGGCGTCGCGGGCGTGGCTGTGTTGGGCCTTGTCGCCATTCGCGGCTCAGCGCTTTCCGGCGGCGACGCCGAC
CAGGCTGAGGGGTTCATCGAGGCGCTGGCCGAGCCGGCCGCCCTGGCCGCCGCCGACGGTCGCGTCCTGGCCGCCAACGG
GCCCTGGCGCGAAGTCATGGGCGAACAGCGCCGCCTGCCCAAGGGCGTGGCGGGCTCCAGCCTGTTTGCGGCCCTGGTCC
AGGCGCGCCAGGGGCAGATGGCCGAGGGCATGCTGAGCGCTGGAGGAACCGACTATACCGCCAAGGTCTCGCGCCTTGCG
GGCGGACGGCTGATGATCCGGCTTGCGCCCATCGTTGTCGCTGAGCCGGTTGTGGAAGACGCGTCGCCGGCCCCGGTCGC
CGAGCGCGCCGCCCCGCCACCCAGCTCGCTGGACGCCTTCGCCGGAGCCTCGCCGTTCGGCGCGGCCCTGCTGGAAGGCC
TGGAGCCGTTCACCTCGCGGGTGCTGGAGACCAATCCGGCGCTGACCACGATGACCGGCGCCAAGGCCGGTGTGCTGTTC
GGCGATCTGATCGACGCCGCCTCGCGCGCCGAGGCCGAGACGCGCCTGAACGAAGGCCGCGCCGGTCCCTACGAGGTGCG
GTTGGCGCGCGATCCGTCGCGCATCGCTCACCTTTACCTCTATCGCGCCGAAGGCCGCCTGGTGGCCTACATGATCGACG
TGTCCGAGCAGAAGCAGATCGAGCTGCAGCTGTCCCAGGCCCAGAAGATGCAGGCCATCGGCCAGCTGGCCGGCGGCGTC
GCGCACGACTTCAACAACCTCTTGACCGCCATCCAGCTGCGTCTGGACGAGTTGCTGCATCGCCATCCCGTCGGTGATCC
GTCGTACGAGGGTCTCAACGAGATCCGTCAGACGGGCGTGCGCGCCGCCGACCTCGTGCGCAAGCTCTTGGCTTTCTCGC
GCAAGCAGACCGTGCAGCGCGAGGTGCTGGATCTGGGCGAGCTGATCAGCGAGTTCGAGGTCTTGCTGCGCCGCCTGCTG
CGCGAAGACGTCAAGCTGATCACCGACTATGGCCGCGACCTGCCGCAGGTGCGCGCCGACAAGAGCCAGCTCGAGACGGC
GGTCATGAACCTGGCCGTCAACGCCCGCGACGCCGTGCGCGCGGCCAAGGGCGGCGGCGTCGTGCGCATCCGCACCGCGC
GCCTGACCCGCGACGAGGCGATCCAGCTGGGTTTCCCGGCCGCCGACGGCGACACGGCCTTCATTGAGGTCAGTGACGAT
GGTCCGGGCATTCCGCCCGACGTCATGGGCAAGATCTTCGACCCGTTCTTCACCACCAAGCCGGTGGGCGAGGGTACGGG
CCTAGGCCTAGCCACGGTCTATGGCATCGTTAAGCAGAGCGACGGCTGGATTCACGTCCACAGCCGTCCGAACGAAGGCG
CGGCCTTCCGCATCTTCCTGCCGGTCTATGAAGCGCCCGCCGGCGCGGTCGCCGTCCAGGCCGTCGCCGAGCCCGCCAAG
CCGCGCGCCGCTCGCGACCTGTCGGGCGCCGGCCGCATCCTGTTCGTCGAGGACGAGGACGCCGTGCGCAGCGTCGCCGC
CCGCCTGCTGCGCGCCCGTGGCTACGAGGTGCTTGAGGCGGCCGACGGCGAAGAGGCCCTGATCATCGCCGAGGAAAACG
CCGGCACGATCGACCTCTTGATCAGCGACGTGATCATGCCCGGCATCGACGGCCCGACCTTGCTGAAGAAGGCGCGTGGC
TATCTGGGGACCGCGCCGGTGATGTTCATCTCCGGCTATGCCGAGGCCGAGTTCAGCGACCTCTTGGAAGGCGAGACGGG
CGTGACCTTCCTCCCCAAGCCGATCGACATCAAGACCCTGGCCGAGCGCGTCAAGCAGCAGCTGCAGGCGGCGTAG

Upstream 100 bases:

>100_bases
CACATTCTCCAGAAAACTGACCTAGCCTCCAGAAAAGGCTATTCTTTCTCCAATTGCGGGTGAGTCGCTGGCTCGCCGTA
AGAAAGGTACAACCTCGCCG

Downstream 100 bases:

>100_bases
AAGCCTTGCGTCCTTCGAGGCCCGCTTTGCGGGCGCCGCGAAGGACGCGACACTTCAGGCCCTTGCCGGCAGGAACTTCG
GATTACGCACCAGCGCCGCG

Product: cell cycle histidine kinase CckA

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 691; Mature: 690

Protein sequence:

>691_residues
MADLQLQDKVSTGAPRRRFDPWLVGAAVFFVAAAALSAAPALKAGPTTLAGLLLLLGVAGVAVLGLVAIRGSALSGGDAD
QAEGFIEALAEPAALAAADGRVLAANGPWREVMGEQRRLPKGVAGSSLFAALVQARQGQMAEGMLSAGGTDYTAKVSRLA
GGRLMIRLAPIVVAEPVVEDASPAPVAERAAPPPSSLDAFAGASPFGAALLEGLEPFTSRVLETNPALTTMTGAKAGVLF
GDLIDAASRAEAETRLNEGRAGPYEVRLARDPSRIAHLYLYRAEGRLVAYMIDVSEQKQIELQLSQAQKMQAIGQLAGGV
AHDFNNLLTAIQLRLDELLHRHPVGDPSYEGLNEIRQTGVRAADLVRKLLAFSRKQTVQREVLDLGELISEFEVLLRRLL
REDVKLITDYGRDLPQVRADKSQLETAVMNLAVNARDAVRAAKGGGVVRIRTARLTRDEAIQLGFPAADGDTAFIEVSDD
GPGIPPDVMGKIFDPFFTTKPVGEGTGLGLATVYGIVKQSDGWIHVHSRPNEGAAFRIFLPVYEAPAGAVAVQAVAEPAK
PRAARDLSGAGRILFVEDEDAVRSVAARLLRARGYEVLEAADGEEALIIAEENAGTIDLLISDVIMPGIDGPTLLKKARG
YLGTAPVMFISGYAEAEFSDLLEGETGVTFLPKPIDIKTLAERVKQQLQAA

Sequences:

>Translated_691_residues
MADLQLQDKVSTGAPRRRFDPWLVGAAVFFVAAAALSAAPALKAGPTTLAGLLLLLGVAGVAVLGLVAIRGSALSGGDAD
QAEGFIEALAEPAALAAADGRVLAANGPWREVMGEQRRLPKGVAGSSLFAALVQARQGQMAEGMLSAGGTDYTAKVSRLA
GGRLMIRLAPIVVAEPVVEDASPAPVAERAAPPPSSLDAFAGASPFGAALLEGLEPFTSRVLETNPALTTMTGAKAGVLF
GDLIDAASRAEAETRLNEGRAGPYEVRLARDPSRIAHLYLYRAEGRLVAYMIDVSEQKQIELQLSQAQKMQAIGQLAGGV
AHDFNNLLTAIQLRLDELLHRHPVGDPSYEGLNEIRQTGVRAADLVRKLLAFSRKQTVQREVLDLGELISEFEVLLRRLL
REDVKLITDYGRDLPQVRADKSQLETAVMNLAVNARDAVRAAKGGGVVRIRTARLTRDEAIQLGFPAADGDTAFIEVSDD
GPGIPPDVMGKIFDPFFTTKPVGEGTGLGLATVYGIVKQSDGWIHVHSRPNEGAAFRIFLPVYEAPAGAVAVQAVAEPAK
PRAARDLSGAGRILFVEDEDAVRSVAARLLRARGYEVLEAADGEEALIIAEENAGTIDLLISDVIMPGIDGPTLLKKARG
YLGTAPVMFISGYAEAEFSDLLEGETGVTFLPKPIDIKTLAERVKQQLQAA
>Mature_690_residues
ADLQLQDKVSTGAPRRRFDPWLVGAAVFFVAAAALSAAPALKAGPTTLAGLLLLLGVAGVAVLGLVAIRGSALSGGDADQ
AEGFIEALAEPAALAAADGRVLAANGPWREVMGEQRRLPKGVAGSSLFAALVQARQGQMAEGMLSAGGTDYTAKVSRLAG
GRLMIRLAPIVVAEPVVEDASPAPVAERAAPPPSSLDAFAGASPFGAALLEGLEPFTSRVLETNPALTTMTGAKAGVLFG
DLIDAASRAEAETRLNEGRAGPYEVRLARDPSRIAHLYLYRAEGRLVAYMIDVSEQKQIELQLSQAQKMQAIGQLAGGVA
HDFNNLLTAIQLRLDELLHRHPVGDPSYEGLNEIRQTGVRAADLVRKLLAFSRKQTVQREVLDLGELISEFEVLLRRLLR
EDVKLITDYGRDLPQVRADKSQLETAVMNLAVNARDAVRAAKGGGVVRIRTARLTRDEAIQLGFPAADGDTAFIEVSDDG
PGIPPDVMGKIFDPFFTTKPVGEGTGLGLATVYGIVKQSDGWIHVHSRPNEGAAFRIFLPVYEAPAGAVAVQAVAEPAKP
RAARDLSGAGRILFVEDEDAVRSVAARLLRARGYEVLEAADGEEALIIAEENAGTIDLLISDVIMPGIDGPTLLKKARGY
LGTAPVMFISGYAEAEFSDLLEGETGVTFLPKPIDIKTLAERVKQQLQAA

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=268, Percent_Identity=30.9701492537313, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=29.8755186721992, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1790300, Length=263, Percent_Identity=30.4182509505703, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI87081816, Length=293, Percent_Identity=26.2798634812287, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1788713, Length=284, Percent_Identity=27.8169014084507, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI145693157, Length=288, Percent_Identity=26.3888888888889, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790346, Length=246, Percent_Identity=27.6422764227642, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786912, Length=248, Percent_Identity=28.2258064516129, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 73077; Mature: 72945

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLQLQDKVSTGAPRRRFDPWLVGAAVFFVAAAALSAAPALKAGPTTLAGLLLLLGVAG
CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VAVLGLVAIRGSALSGGDADQAEGFIEALAEPAALAAADGRVLAANGPWREVMGEQRRLP
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCEEEECCCCHHHHHHHHHCCC
KGVAGSSLFAALVQARQGQMAEGMLSAGGTDYTAKVSRLAGGRLMIRLAPIVVAEPVVED
CCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECHHHHCHHHCC
ASPAPVAERAAPPPSSLDAFAGASPFGAALLEGLEPFTSRVLETNPALTTMTGAKAGVLF
CCCCCCHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHH
GDLIDAASRAEAETRLNEGRAGPYEVRLARDPSRIAHLYLYRAEGRLVAYMIDVSEQKQI
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHEEEEEEEEECCCEEEEEEECCCCHHH
ELQLSQAQKMQAIGQLAGGVAHDFNNLLTAIQLRLDELLHRHPVGDPSYEGLNEIRQTGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
RAADLVRKLLAFSRKQTVQREVLDLGELISEFEVLLRRLLREDVKLITDYGRDLPQVRAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
KSQLETAVMNLAVNARDAVRAAKGGGVVRIRTARLTRDEAIQLGFPAADGDTAFIEVSDD
HHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCCCCCEEEEEECCC
GPGIPPDVMGKIFDPFFTTKPVGEGTGLGLATVYGIVKQSDGWIHVHSRPNEGAAFRIFL
CCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEE
PVYEAPAGAVAVQAVAEPAKPRAARDLSGAGRILFVEDEDAVRSVAARLLRARGYEVLEA
EEECCCCCHHHHHHHHCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEC
ADGEEALIIAEENAGTIDLLISDVIMPGIDGPTLLKKARGYLGTAPVMFISGYAEAEFSD
CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHEEECCCCHHHHH
LLEGETGVTFLPKPIDIKTLAERVKQQLQAA
HHCCCCCCEECCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADLQLQDKVSTGAPRRRFDPWLVGAAVFFVAAAALSAAPALKAGPTTLAGLLLLLGVAG
CCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VAVLGLVAIRGSALSGGDADQAEGFIEALAEPAALAAADGRVLAANGPWREVMGEQRRLP
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCEEEECCCCHHHHHHHHHCCC
KGVAGSSLFAALVQARQGQMAEGMLSAGGTDYTAKVSRLAGGRLMIRLAPIVVAEPVVED
CCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECHHHHCHHHCC
ASPAPVAERAAPPPSSLDAFAGASPFGAALLEGLEPFTSRVLETNPALTTMTGAKAGVLF
CCCCCCHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHH
GDLIDAASRAEAETRLNEGRAGPYEVRLARDPSRIAHLYLYRAEGRLVAYMIDVSEQKQI
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHEEEEEEEEECCCEEEEEEECCCCHHH
ELQLSQAQKMQAIGQLAGGVAHDFNNLLTAIQLRLDELLHRHPVGDPSYEGLNEIRQTGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
RAADLVRKLLAFSRKQTVQREVLDLGELISEFEVLLRRLLREDVKLITDYGRDLPQVRAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
KSQLETAVMNLAVNARDAVRAAKGGGVVRIRTARLTRDEAIQLGFPAADGDTAFIEVSDD
HHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCCCCCEEEEEECCC
GPGIPPDVMGKIFDPFFTTKPVGEGTGLGLATVYGIVKQSDGWIHVHSRPNEGAAFRIFL
CCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEE
PVYEAPAGAVAVQAVAEPAKPRAARDLSGAGRILFVEDEDAVRSVAARLLRARGYEVLEA
EEECCCCCHHHHHHHHCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCEEEC
ADGEEALIIAEENAGTIDLLISDVIMPGIDGPTLLKKARGYLGTAPVMFISGYAEAEFSD
CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHEEECCCCHHHHH
LLEGETGVTFLPKPIDIKTLAERVKQQLQAA
HHCCCCCCEECCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA