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The map label for this gene is 16124578

Identifier: 16124578

GI number: 16124578

Start: 338508

End: 339665

Strand: Direct

Name: 16124578

Synonym: CC_0323

Alternate gene names: NA

Gene position: 338508-339665 (Clockwise)

Preceding gene: 16124576

Following gene: 16124580

Centisome position: 8.43

GC content: 67.7

Gene sequence:

>1158_bases
TTGACTCTTTTTGACGGAACGCCGTTCGAATGGGCGCCGGGGCGCATCGAGGTTCGCGCGAGGCGCGAATGTGGCGCTTC
CCGAAAGAGTCTAGTCGTCGCCGCCGGTGTGTCTTATCTCGCGCGCATGATCTTTTCGTTCGACGCCTTTGTCACAAACG
CCCTGTTTGATCGCTCCGGCCGCGCCATGTTCGCGCTCGGCGACGGCACGGTTCGCCTGCAGACCGACGAGGGATTCGTC
ACGGTCGAGGCGCATGGCGGCCCACTGGGCGGCGCGGTCCTGGCGGCGGCGGTCCACCCCAGCGGCGCGGGGATCGTCAC
CGGCGGCGACGACGGCCGCGTGGTCTGGAGCCGAATCGAGGGCGGCGAGGTCGTCGCCACCCTGATCGCCGAGGTGAAGA
ACAAGTGGATCGAGCATGTGGCCGCCAGCGCCGCCTCGGGACTGATCGCCTTCACCGTCGGCAAGGAGGTCCATGTCCGC
GACGCCGCCGATCCGGCCTTTGCGCGCACGTTCCCACATGAAAAGACGGTGTCGGGTCTGGCGTTCGAGCCCAAGGGCCG
GCGCCTGGCCTCGGCGACCTATGGCGGCGCCTATCTGTGGTACGCGCGGATCGCCGATCAGAAGCCGACGGTCCTGAAGT
GGGCCGGCAGCCATATCGCGGTGGAATTCAGCCCGGACGGCAAGTTCCTGATCTCGTCCATGCAGGAAAACCAGCTGCAC
GGCTGGCGGCTGTCGGACGGCAAGGACATGCGAATGGGCGGCTATCCGTCCAAGATCAAAAGCGTGGCCTTCTTCGACAA
GGGCAATCTCTTGGCCACGGCCGGCGCCTCGGGCGCGGTCATCTGGCCTTTCGCGGGCGCCAACGGGCCGATGGGCAAAG
AGGCCGCCGAGATCGGCTTCTCGCGCGATTCGATGGTGGTCCGCGTGGCGGGGATCGACCCTCAGCCAGTCTGCATCGCC
GGCCAGGACAGCGGCAAGATCTGGGCGGCGCACATGCGTAACGGCCGCATCGAGACCCTCAAGGCCGAGAAGGGCGCGCC
CATCAGCGCCCTGTCGGTCAGCGCCGACGGCAAGCGGCTGGCCTGGGGCGACGAGAGCGGCGAGGCCGGGGTGCTCGAGA
TCCCCGACCTTTCCGGCCCGCGTCAGTTTGTGGGGTAG

Upstream 100 bases:

>100_bases
CGCGCGTCGCGCACGCCTGAAATGTCGTTACCTCGCCACGTCTGGCGCAGACGGGCGCGGAAGTAAAGCCCGACGACGCG
GCGCAATAGCAACCCCCTTT

Downstream 100 bases:

>100_bases
GGCCTAGAAAGCCGACTCCAAGACGCCGTCATCCCGCGCTTTATGCGCGGGACCCATGGTTCAGCTTCCACGTGAGCGTG
TGGGTTTGCCCTTCACTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MTLFDGTPFEWAPGRIEVRARRECGASRKSLVVAAGVSYLARMIFSFDAFVTNALFDRSGRAMFALGDGTVRLQTDEGFV
TVEAHGGPLGGAVLAAAVHPSGAGIVTGGDDGRVVWSRIEGGEVVATLIAEVKNKWIEHVAASAASGLIAFTVGKEVHVR
DAADPAFARTFPHEKTVSGLAFEPKGRRLASATYGGAYLWYARIADQKPTVLKWAGSHIAVEFSPDGKFLISSMQENQLH
GWRLSDGKDMRMGGYPSKIKSVAFFDKGNLLATAGASGAVIWPFAGANGPMGKEAAEIGFSRDSMVVRVAGIDPQPVCIA
GQDSGKIWAAHMRNGRIETLKAEKGAPISALSVSADGKRLAWGDESGEAGVLEIPDLSGPRQFVG

Sequences:

>Translated_385_residues
MTLFDGTPFEWAPGRIEVRARRECGASRKSLVVAAGVSYLARMIFSFDAFVTNALFDRSGRAMFALGDGTVRLQTDEGFV
TVEAHGGPLGGAVLAAAVHPSGAGIVTGGDDGRVVWSRIEGGEVVATLIAEVKNKWIEHVAASAASGLIAFTVGKEVHVR
DAADPAFARTFPHEKTVSGLAFEPKGRRLASATYGGAYLWYARIADQKPTVLKWAGSHIAVEFSPDGKFLISSMQENQLH
GWRLSDGKDMRMGGYPSKIKSVAFFDKGNLLATAGASGAVIWPFAGANGPMGKEAAEIGFSRDSMVVRVAGIDPQPVCIA
GQDSGKIWAAHMRNGRIETLKAEKGAPISALSVSADGKRLAWGDESGEAGVLEIPDLSGPRQFVG
>Mature_384_residues
TLFDGTPFEWAPGRIEVRARRECGASRKSLVVAAGVSYLARMIFSFDAFVTNALFDRSGRAMFALGDGTVRLQTDEGFVT
VEAHGGPLGGAVLAAAVHPSGAGIVTGGDDGRVVWSRIEGGEVVATLIAEVKNKWIEHVAASAASGLIAFTVGKEVHVRD
AADPAFARTFPHEKTVSGLAFEPKGRRLASATYGGAYLWYARIADQKPTVLKWAGSHIAVEFSPDGKFLISSMQENQLHG
WRLSDGKDMRMGGYPSKIKSVAFFDKGNLLATAGASGAVIWPFAGANGPMGKEAAEIGFSRDSMVVRVAGIDPQPVCIAG
QDSGKIWAAHMRNGRIETLKAEKGAPISALSVSADGKRLAWGDESGEAGVLEIPDLSGPRQFVG

Specific function: Unknown

COG id: COG2319

COG function: function code R; FOG: WD40 repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 13 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020472
- InterPro:   IPR011600
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00656 Peptidase_C14; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 40632; Mature: 40500

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS50294 WD_REPEATS_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLFDGTPFEWAPGRIEVRARRECGASRKSLVVAAGVSYLARMIFSFDAFVTNALFDRSG
CCCCCCCCCCCCCCEEEEEEHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCC
RAMFALGDGTVRLQTDEGFVTVEAHGGPLGGAVLAAAVHPSGAGIVTGGDDGRVVWSRIE
CEEEEECCCEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCCCCCEEEEECC
GGEVVATLIAEVKNKWIEHVAASAASGLIAFTVGKEVHVRDAADPAFARTFPHEKTVSGL
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCCCHHHHCCCCCCCCCCE
AFEPKGRRLASATYGGAYLWYARIADQKPTVLKWAGSHIAVEFSPDGKFLISSMQENQLH
EECCCCCEEEEECCCCEEEEEEEECCCCCCEEEECCCEEEEEECCCCCEEEECCCCCCCC
GWRLSDGKDMRMGGYPSKIKSVAFFDKGNLLATAGASGAVIWPFAGANGPMGKEAAEIGF
CEECCCCCCEECCCCHHHHCEEEEEECCCEEEECCCCCEEEEEECCCCCCCCCHHHHCCC
SRDSMVVRVAGIDPQPVCIAGQDSGKIWAAHMRNGRIETLKAEKGAPISALSVSADGKRL
CCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCEE
AWGDESGEAGVLEIPDLSGPRQFVG
ECCCCCCCCCEEECCCCCCCHHHCC
>Mature Secondary Structure 
TLFDGTPFEWAPGRIEVRARRECGASRKSLVVAAGVSYLARMIFSFDAFVTNALFDRSG
CCCCCCCCCCCCCEEEEEEHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCC
RAMFALGDGTVRLQTDEGFVTVEAHGGPLGGAVLAAAVHPSGAGIVTGGDDGRVVWSRIE
CEEEEECCCEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCCCCCEEEEECC
GGEVVATLIAEVKNKWIEHVAASAASGLIAFTVGKEVHVRDAADPAFARTFPHEKTVSGL
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCCCHHHHCCCCCCCCCCE
AFEPKGRRLASATYGGAYLWYARIADQKPTVLKWAGSHIAVEFSPDGKFLISSMQENQLH
EECCCCCEEEEECCCCEEEEEEEECCCCCCEEEECCCEEEEEECCCCCEEEECCCCCCCC
GWRLSDGKDMRMGGYPSKIKSVAFFDKGNLLATAGASGAVIWPFAGANGPMGKEAAEIGF
CEECCCCCCEECCCCHHHHCEEEEEECCCEEEECCCCCEEEEEECCCCCCCCCHHHHCCC
SRDSMVVRVAGIDPQPVCIAGQDSGKIWAAHMRNGRIETLKAEKGAPISALSVSADGKRL
CCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCEE
AWGDESGEAGVLEIPDLSGPRQFVG
ECCCCCCCCCEEECCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]