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The map label for this gene is yjiA [H]

Identifier: 16124576

GI number: 16124576

Start: 336631

End: 337728

Strand: Direct

Name: yjiA [H]

Synonym: CC_0321

Alternate gene names: 16124576

Gene position: 336631-337728 (Clockwise)

Preceding gene: 16124575

Following gene: 16124578

Centisome position: 8.38

GC content: 64.21

Gene sequence:

>1098_bases
ATGACCCAGACTGTCCCGACCTCCGGCAAGATCCCCGTCACCGTGCTCACCGGCTATCTCGGCGCCGGCAAGACCACTTT
GCTCAACCGCATCCTCACCGAGGAGCACGGCAAGCGCTACGCCGTGATCGTCAACGAGTTCGGCGAGGTCGGCATCGACA
ACGACTTGGTGGTCGGCGCCGATGAAGAAGTGTTCGAGATGAACAACGGCTGCGTCTGCTGCACCGTGCGCGGCGACCTG
ATCCGGGTTCTCCAGGGCCTGATGAAGCGAAAGGGCGGTTTCGACGCCATCATCGTCGAGACGACGGGCCTGGCCGATCC
GGGTCCCGTGGCTCAGACCTTCTTCGTCGACGATGACGTCAAGGCGCGTACCGCCCTCGACTCGGTCACGGCCGTGGTCG
ACGCCAAGCACATCCTGCTGCGCCTATCTGACAGCAAGGAGGCCGTCGAGCAGATCGCCTTCGCCGACCAGATCGTGTTG
AACAAGACCGACCTGGTGTCAGAGGACGACCTGCGACACGTCGAGGCGCGCATCCGTCGGATCAACCCGCTGGCCCCGAT
CCACCGCGCCCAGCGTTCGAACGTTCCGCTGGACGCCATTCTAGGCAAGCACAGCTTCGATCTCGAGCGGATCACCGACC
TGGAGCCGGACTTCCTCAATCCGGCCCATGGCGAGCCGGGGCACGTGCACGACGAGCACTGCGACCACCATCACCATCAC
GACCATGACCACGTGCATGACGAGCACTGCGGTCACGACCACCACCATCATCATCACGACCACAAGAGCGACGTCCACGA
TGACGGCGTGAAGGGCATCTCGCTGACGCTGGATAAGCCGGTGGACGGCCAGAAGATCACCGCCTGGCTCAATGACCTGC
TGGCCCGTCGCGGCCCCGACATCCTGCGCGCCAAGGGCATCATCGACGTGAAGGGCGAGGACAAGCGCCTCGTGTTCCAA
GCGGTGCACATGATCCTGGAGGGTGACTTCCAGCGCCCGTGGACCGACAAGGACAAGCGCTACAGCCGGATGGTCTTCAT
CGGTCGCGACCTCGACGAGGCCGAGCTGCGCGCGGGCTTCGAGGCGACGGCGGCTTAA

Upstream 100 bases:

>100_bases
CATTCTCGGCGTGGCCCTTGTCCTGGTGGGCCTGGCCGTCGCGTTCCTCAAGACGTAAAGGCGGCTTCCGCTGGACGGCC
TGGGCCCCTAAATAGCGGCC

Downstream 100 bases:

>100_bases
GGGGGCTAAAGTCCTCCCCCAAGCGGGGGAGGTGTCGGCGAAGCCGACGGAGGGGGAAATCCTCCTGGGCCTTGCCTCTT
CCCTCTCCGTCGTCTCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MTQTVPTSGKIPVTVLTGYLGAGKTTLLNRILTEEHGKRYAVIVNEFGEVGIDNDLVVGADEEVFEMNNGCVCCTVRGDL
IRVLQGLMKRKGGFDAIIVETTGLADPGPVAQTFFVDDDVKARTALDSVTAVVDAKHILLRLSDSKEAVEQIAFADQIVL
NKTDLVSEDDLRHVEARIRRINPLAPIHRAQRSNVPLDAILGKHSFDLERITDLEPDFLNPAHGEPGHVHDEHCDHHHHH
DHDHVHDEHCGHDHHHHHHDHKSDVHDDGVKGISLTLDKPVDGQKITAWLNDLLARRGPDILRAKGIIDVKGEDKRLVFQ
AVHMILEGDFQRPWTDKDKRYSRMVFIGRDLDEAELRAGFEATAA

Sequences:

>Translated_365_residues
MTQTVPTSGKIPVTVLTGYLGAGKTTLLNRILTEEHGKRYAVIVNEFGEVGIDNDLVVGADEEVFEMNNGCVCCTVRGDL
IRVLQGLMKRKGGFDAIIVETTGLADPGPVAQTFFVDDDVKARTALDSVTAVVDAKHILLRLSDSKEAVEQIAFADQIVL
NKTDLVSEDDLRHVEARIRRINPLAPIHRAQRSNVPLDAILGKHSFDLERITDLEPDFLNPAHGEPGHVHDEHCDHHHHH
DHDHVHDEHCGHDHHHHHHDHKSDVHDDGVKGISLTLDKPVDGQKITAWLNDLLARRGPDILRAKGIIDVKGEDKRLVFQ
AVHMILEGDFQRPWTDKDKRYSRMVFIGRDLDEAELRAGFEATAA
>Mature_364_residues
TQTVPTSGKIPVTVLTGYLGAGKTTLLNRILTEEHGKRYAVIVNEFGEVGIDNDLVVGADEEVFEMNNGCVCCTVRGDLI
RVLQGLMKRKGGFDAIIVETTGLADPGPVAQTFFVDDDVKARTALDSVTAVVDAKHILLRLSDSKEAVEQIAFADQIVLN
KTDLVSEDDLRHVEARIRRINPLAPIHRAQRSNVPLDAILGKHSFDLERITDLEPDFLNPAHGEPGHVHDEHCDHHHHHD
HDHVHDEHCGHDHHHHHHDHKSDVHDDGVKGISLTLDKPVDGQKITAWLNDLLARRGPDILRAKGIIDVKGEDKRLVFQA
VHMILEGDFQRPWTDKDKRYSRMVFIGRDLDEAELRAGFEATAA

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=380, Percent_Identity=35.5263157894737, Blast_Score=219, Evalue=2e-57,
Organism=Homo sapiens, GI126722884, Length=380, Percent_Identity=35.2631578947368, Blast_Score=218, Evalue=8e-57,
Organism=Homo sapiens, GI146231952, Length=380, Percent_Identity=35.2631578947368, Blast_Score=215, Evalue=6e-56,
Organism=Homo sapiens, GI148727351, Length=380, Percent_Identity=35.2631578947368, Blast_Score=214, Evalue=8e-56,
Organism=Homo sapiens, GI223941779, Length=376, Percent_Identity=34.3085106382979, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI223941776, Length=368, Percent_Identity=33.9673913043478, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI119120938, Length=143, Percent_Identity=50.3496503496504, Blast_Score=146, Evalue=3e-35,
Organism=Escherichia coli, GI87082430, Length=355, Percent_Identity=34.9295774647887, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1788499, Length=154, Percent_Identity=34.4155844155844, Blast_Score=83, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6324356, Length=249, Percent_Identity=32.5301204819277, Blast_Score=146, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 40706; Mature: 40575

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTVPTSGKIPVTVLTGYLGAGKTTLLNRILTEEHGKRYAVIVNEFGEVGIDNDLVVGA
CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEECC
DEEVFEMNNGCVCCTVRGDLIRVLQGLMKRKGGFDAIIVETTGLADPGPVAQTFFVDDDV
CHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCC
KARTALDSVTAVVDAKHILLRLSDSKEAVEQIAFADQIVLNKTDLVSEDDLRHVEARIRR
HHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
INPLAPIHRAQRSNVPLDAILGKHSFDLERITDLEPDFLNPAHGEPGHVHDEHCDHHHHH
CCCCHHHHHHHHCCCCHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DHDHVHDEHCGHDHHHHHHDHKSDVHDDGVKGISLTLDKPVDGQKITAWLNDLLARRGPD
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCC
ILRAKGIIDVKGEDKRLVFQAVHMILEGDFQRPWTDKDKRYSRMVFIGRDLDEAELRAGF
CEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEEEEECCCCHHHHHCCC
EATAA
HHCCC
>Mature Secondary Structure 
TQTVPTSGKIPVTVLTGYLGAGKTTLLNRILTEEHGKRYAVIVNEFGEVGIDNDLVVGA
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEECC
DEEVFEMNNGCVCCTVRGDLIRVLQGLMKRKGGFDAIIVETTGLADPGPVAQTFFVDDDV
CHHHHCCCCCEEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCC
KARTALDSVTAVVDAKHILLRLSDSKEAVEQIAFADQIVLNKTDLVSEDDLRHVEARIRR
HHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
INPLAPIHRAQRSNVPLDAILGKHSFDLERITDLEPDFLNPAHGEPGHVHDEHCDHHHHH
CCCCHHHHHHHHCCCCHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DHDHVHDEHCGHDHHHHHHDHKSDVHDDGVKGISLTLDKPVDGQKITAWLNDLLARRGPD
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCC
ILRAKGIIDVKGEDKRLVFQAVHMILEGDFQRPWTDKDKRYSRMVFIGRDLDEAELRAGF
CEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEEEEECCCCHHHHHCCC
EATAA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]