| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is fecA [H]
Identifier: 16124394
GI number: 16124394
Start: 148752
End: 150944
Strand: Direct
Name: fecA [H]
Synonym: CC_0139
Alternate gene names: 16124394
Gene position: 148752-150944 (Clockwise)
Preceding gene: 16124391
Following gene: 16124402
Centisome position: 3.7
GC content: 67.31
Gene sequence:
>2193_bases GTGTCCATCGTGATCCGCTCCCATCGACACGCCGTCCGTTTCGGGGCGTCCCTTTCCGTCCTGGCCCTGCTGGGTCCGGC GTTCGGGGCGAATGCGAAGGAAGCGGCGCCCTTGGACGCAAAGGCCGATACCGAGATCAGCGAGGTGCTGGTGCTGGGGC GAGGCGCCCAGCGTCTCAGGATCGCCGGTTCGAGCCATGTGGTGAACGAGGCCGACCTGGAACGGTCTCGCGTCCTGACC GTCAATGAGGCCCTGCGCCAAGTGCCCGGTGTCTATGCGCGCGATGAGGAGGGCCTGGGCCTGCGTCCCAACATCGGGAT TCGCGGTTTGGCGCCCACCCGATCGACCAAGATTCTGCAGCTGGAGGACGGCCTGCCGCTGAGCTACGCCCCCTATACGG ACAACGCCAGCTACTCGATGCCGCCCTTTCGTCGGTTTGTCCGCATCGAAACCCTCAAGAGCGCCAGCCAGATCCGGTTT GGCCCCAACACCGTGGGCGGGGTCATCAACTTCATCACCCCCAGCGCGCCGGAGACCTTTGGCGGCGACCTGTTCATGGC CGCTGGCGGGCGGGGCTATCAGGAGCTGGACCTGAAGATCGGCGGCCCGGTCCTGGGCGAACTCGCTGCGATCGGTCACG CCAACCGCACGCGTTCGAACGGCGTTCGCGACAATACGGCGCTGGAGATCCAGGACCTTTGGGGCAAGCTTGAGGGGCGG CTGTCGGCGCACCACGCCATCGCCCTGCGGGTCGGCCACGCCACCGAGGACAGCCAGGTGACCTATTCTGGCCTGACGGC GGCGGAGTATGCGGCCGATCCCCGGCAGAACCCGTTCGCCAACGACCATTTCAAGATCAAGCGCGCGACCGCGGCGATCA CCCACGGCTGGACGCTGTCGGAGTCCCTCAACCTCAAGACCTCGGCCTATAGCCTCTGGTTCGACCGCGACTGGTGGCGG CAATCCTCAAACTCCGGCCAGCGACCCAACGACGCCAGCGATCCGGCGTGCGGCGGCATGGCCAATCTGAACACCACCTG CGGCAATGAAGGCCGCCTGCGCGAGTACAACACCTATGGCCTCGACACCCGCCTGACCTGGACGGGCGCGCTGGTCGGCG CCCAGGCGGTGATCGAGGCGGGCGCGCGCCATCAGTGGGAACGTCAGAACCGGCTGCAGTTGAACGGCGATCGCCCCACA GCGCGCACGGCGGGAACCTCGGTCAACGGCGGGGTTCGTGAAAACAATCTGCGCTATGGCGAGGCCAGCGCCGGCTTTGT CAGCCTCAGCCTGACCTGGGACCGCCTGACGGTGAATCCGGGCCTGCGGGTCGAACAGATCGACTATCGTCGGGTCAACC GGCTGAACGGGACGACCGGCGAGACCGACCTGTCTGAGGTGATTCCGGGCCTGGGCTTCGCCTGGGCGGTCAAGCCGGGG GCCTACCTCTACGGCGGCGTGCACCGTGGCTTCGCCCCGCCGAGGGCCGAGGACATCGTCAGCGGCACGGGCGGCGTGGT CGACATCGAGGCCGAGGAGAGCGTCAACAGCGAGATCGGCTATCGCAGCGCGGTCCGGCCCGGCCTGTTTGTGGACATCA ACGCCTTCCGCATGGACTTTGAAAACCAGGTGATCCCCGCCTCGGTGGCCGGCGGCGTCGGCGCCACCCTGACCAATGGC GGCAAGACCCGTCACCAGGGCGTGGAGCTGTCGCTAAAGGGTTCGCTGCGCGAGATGGGCATGATCCGAGGGGACGACGT CTTCTTCCGGTCGGCCCTCACCTGGCTGCCCGACGCCGCCTTCGTCGGGACGCGTCGCTCCAGCGTCAGCGGCTTTGGCG GGGTCTCGGTGTCGGGCAATCGCCTGCCCTATGCGCCCCGCTGGCTGGCCTCGGCGGCGATCGGCTACAGCTTCGGCGTC CACACCGACGTCCAGCTTGAGGTGCAGCACACCGGAAAGATGTTCACCGATGATCTGAACACGGTGGCCCAGACCGCCGA CGGTCAACGGGGCCTGATCAAGTCCGCCACCGTCTGGAACGCCAGTCTCAACACCCGTCCGTTCGGCGATCGCACGACGC TGTTCCTGGCCGTCAAGAACATCGGCGACAAGCTCTACATCGCCGACCGGTCACGCGGCATTCTGCCGGGCGCGCCCCGG CTGGCCCAGATCGGGCTCAGCCAGCGCTTCTAG
Upstream 100 bases:
>100_bases AGCAATTGCAAGTCAGTCGCATCATTCTATTGCGAGTGACACTCAGACTTACTAACAGACGCCGCTCGGTCCGACGGGGT CGATCTGTTCAGAGTCATAG
Downstream 100 bases:
>100_bases AGCATTTTCCGATCTGTTTGGATCGGAGAAATGCTCTAGCCCTTTGTATTAACGCATTTTCTGACGACGAACCGGATCCA CTTCGTCGGAAAATGCTCTA
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Iron(III) dicitrate transport protein fecA [H]
Number of amino acids: Translated: 730; Mature: 729
Protein sequence:
>730_residues MSIVIRSHRHAVRFGASLSVLALLGPAFGANAKEAAPLDAKADTEISEVLVLGRGAQRLRIAGSSHVVNEADLERSRVLT VNEALRQVPGVYARDEEGLGLRPNIGIRGLAPTRSTKILQLEDGLPLSYAPYTDNASYSMPPFRRFVRIETLKSASQIRF GPNTVGGVINFITPSAPETFGGDLFMAAGGRGYQELDLKIGGPVLGELAAIGHANRTRSNGVRDNTALEIQDLWGKLEGR LSAHHAIALRVGHATEDSQVTYSGLTAAEYAADPRQNPFANDHFKIKRATAAITHGWTLSESLNLKTSAYSLWFDRDWWR QSSNSGQRPNDASDPACGGMANLNTTCGNEGRLREYNTYGLDTRLTWTGALVGAQAVIEAGARHQWERQNRLQLNGDRPT ARTAGTSVNGGVRENNLRYGEASAGFVSLSLTWDRLTVNPGLRVEQIDYRRVNRLNGTTGETDLSEVIPGLGFAWAVKPG AYLYGGVHRGFAPPRAEDIVSGTGGVVDIEAEESVNSEIGYRSAVRPGLFVDINAFRMDFENQVIPASVAGGVGATLTNG GKTRHQGVELSLKGSLREMGMIRGDDVFFRSALTWLPDAAFVGTRRSSVSGFGGVSVSGNRLPYAPRWLASAAIGYSFGV HTDVQLEVQHTGKMFTDDLNTVAQTADGQRGLIKSATVWNASLNTRPFGDRTTLFLAVKNIGDKLYIADRSRGILPGAPR LAQIGLSQRF
Sequences:
>Translated_730_residues MSIVIRSHRHAVRFGASLSVLALLGPAFGANAKEAAPLDAKADTEISEVLVLGRGAQRLRIAGSSHVVNEADLERSRVLT VNEALRQVPGVYARDEEGLGLRPNIGIRGLAPTRSTKILQLEDGLPLSYAPYTDNASYSMPPFRRFVRIETLKSASQIRF GPNTVGGVINFITPSAPETFGGDLFMAAGGRGYQELDLKIGGPVLGELAAIGHANRTRSNGVRDNTALEIQDLWGKLEGR LSAHHAIALRVGHATEDSQVTYSGLTAAEYAADPRQNPFANDHFKIKRATAAITHGWTLSESLNLKTSAYSLWFDRDWWR QSSNSGQRPNDASDPACGGMANLNTTCGNEGRLREYNTYGLDTRLTWTGALVGAQAVIEAGARHQWERQNRLQLNGDRPT ARTAGTSVNGGVRENNLRYGEASAGFVSLSLTWDRLTVNPGLRVEQIDYRRVNRLNGTTGETDLSEVIPGLGFAWAVKPG AYLYGGVHRGFAPPRAEDIVSGTGGVVDIEAEESVNSEIGYRSAVRPGLFVDINAFRMDFENQVIPASVAGGVGATLTNG GKTRHQGVELSLKGSLREMGMIRGDDVFFRSALTWLPDAAFVGTRRSSVSGFGGVSVSGNRLPYAPRWLASAAIGYSFGV HTDVQLEVQHTGKMFTDDLNTVAQTADGQRGLIKSATVWNASLNTRPFGDRTTLFLAVKNIGDKLYIADRSRGILPGAPR LAQIGLSQRF >Mature_729_residues SIVIRSHRHAVRFGASLSVLALLGPAFGANAKEAAPLDAKADTEISEVLVLGRGAQRLRIAGSSHVVNEADLERSRVLTV NEALRQVPGVYARDEEGLGLRPNIGIRGLAPTRSTKILQLEDGLPLSYAPYTDNASYSMPPFRRFVRIETLKSASQIRFG PNTVGGVINFITPSAPETFGGDLFMAAGGRGYQELDLKIGGPVLGELAAIGHANRTRSNGVRDNTALEIQDLWGKLEGRL SAHHAIALRVGHATEDSQVTYSGLTAAEYAADPRQNPFANDHFKIKRATAAITHGWTLSESLNLKTSAYSLWFDRDWWRQ SSNSGQRPNDASDPACGGMANLNTTCGNEGRLREYNTYGLDTRLTWTGALVGAQAVIEAGARHQWERQNRLQLNGDRPTA RTAGTSVNGGVRENNLRYGEASAGFVSLSLTWDRLTVNPGLRVEQIDYRRVNRLNGTTGETDLSEVIPGLGFAWAVKPGA YLYGGVHRGFAPPRAEDIVSGTGGVVDIEAEESVNSEIGYRSAVRPGLFVDINAFRMDFENQVIPASVAGGVGATLTNGG KTRHQGVELSLKGSLREMGMIRGDDVFFRSALTWLPDAAFVGTRRSSVSGFGGVSVSGNRLPYAPRWLASAAIGYSFGVH TDVQLEVQHTGKMFTDDLNTVAQTADGQRGLIKSATVWNASLNTRPFGDRTTLFLAVKNIGDKLYIADRSRGILPGAPRL AQIGLSQRF
Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]
COG id: COG4772
COG function: function code P; Outer membrane receptor for Fe3+-dicitrate
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790743, Length=693, Percent_Identity=24.3867243867244, Blast_Score=138, Evalue=1e-33, Organism=Escherichia coli, GI1787723, Length=696, Percent_Identity=23.2758620689655, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1790405, Length=231, Percent_Identity=27.7056277056277, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 78727; Mature: 78596
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVIRSHRHAVRFGASLSVLALLGPAFGANAKEAAPLDAKADTEISEVLVLGRGAQRLR CEEEEECCCCEEEECCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCEEE IAGSSHVVNEADLERSRVLTVNEALRQVPGVYARDEEGLGLRPNIGIRGLAPTRSTKILQ EECCCCCCCHHCCCHHEEEEHHHHHHHCCCCEECCCCCCCCCCCCCEEECCCCCCEEEEE LEDGLPLSYAPYTDNASYSMPPFRRFVRIETLKSASQIRFGPNTVGGVINFITPSAPETF ECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHEECCCCHHCCCEEECCCCCCCCC GGDLFMAAGGRGYQELDLKIGGPVLGELAAIGHANRTRSNGVRDNTALEIQDLWGKLEGR CCCEEEECCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHCCC LSAHHAIALRVGHATEDSQVTYSGLTAAEYAADPRQNPFANDHFKIKRATAAITHGWTLS CCCCEEEEEEECCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEECCEEEC ESLNLKTSAYSLWFDRDWWRQSSNSGQRPNDASDPACGGMANLNTTCGNEGRLREYNTYG CCCCCEEEEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC LDTRLTWTGALVGAQAVIEAGARHQWERQNRLQLNGDRPTARTAGTSVNGGVRENNLRYG CCEEEEEHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEC EASAGFVSLSLTWDRLTVNPGLRVEQIDYRRVNRLNGTTGETDLSEVIPGLGFAWAVKPG CCCCCEEEEEEEEEEEEECCCCEEEEECHHHHHHCCCCCCCCCHHHHCCCCCEEEEECCC AYLYGGVHRGFAPPRAEDIVSGTGGVVDIEAEESVNSEIGYRSAVRPGLFVDINAFRMDF CEEECCHHCCCCCCCHHHHHCCCCCEEEEECHHCCCCCCCCHHHCCCCEEEEEHHEEECC ENQVIPASVAGGVGATLTNGGKTRHQGVELSLKGSLREMGMIRGDDVFFRSALTWLPDAA CCCEECHHHCCCCCEEECCCCCCCCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCC FVGTRRSSVSGFGGVSVSGNRLPYAPRWLASAAIGYSFGVHTDVQLEVQHTGKMFTDDLN EECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHH TVAQTADGQRGLIKSATVWNASLNTRPFGDRTTLFLAVKNIGDKLYIADRSRGILPGAPR HHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCH LAQIGLSQRF HHHCCCCCCC >Mature Secondary Structure SIVIRSHRHAVRFGASLSVLALLGPAFGANAKEAAPLDAKADTEISEVLVLGRGAQRLR EEEEECCCCEEEECCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCEEE IAGSSHVVNEADLERSRVLTVNEALRQVPGVYARDEEGLGLRPNIGIRGLAPTRSTKILQ EECCCCCCCHHCCCHHEEEEHHHHHHHCCCCEECCCCCCCCCCCCCEEECCCCCCEEEEE LEDGLPLSYAPYTDNASYSMPPFRRFVRIETLKSASQIRFGPNTVGGVINFITPSAPETF ECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHEECCCCHHCCCEEECCCCCCCCC GGDLFMAAGGRGYQELDLKIGGPVLGELAAIGHANRTRSNGVRDNTALEIQDLWGKLEGR CCCEEEECCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHCCC LSAHHAIALRVGHATEDSQVTYSGLTAAEYAADPRQNPFANDHFKIKRATAAITHGWTLS CCCCEEEEEEECCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEECCEEEC ESLNLKTSAYSLWFDRDWWRQSSNSGQRPNDASDPACGGMANLNTTCGNEGRLREYNTYG CCCCCEEEEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC LDTRLTWTGALVGAQAVIEAGARHQWERQNRLQLNGDRPTARTAGTSVNGGVRENNLRYG CCEEEEEHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEC EASAGFVSLSLTWDRLTVNPGLRVEQIDYRRVNRLNGTTGETDLSEVIPGLGFAWAVKPG CCCCCEEEEEEEEEEEEECCCCEEEEECHHHHHHCCCCCCCCCHHHHCCCCCEEEEECCC AYLYGGVHRGFAPPRAEDIVSGTGGVVDIEAEESVNSEIGYRSAVRPGLFVDINAFRMDF CEEECCHHCCCCCCCHHHHHCCCCCEEEEECHHCCCCCCCCHHHCCCCEEEEEHHEEECC ENQVIPASVAGGVGATLTNGGKTRHQGVELSLKGSLREMGMIRGDDVFFRSALTWLPDAA CCCEECHHHCCCCCEEECCCCCCCCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHCCCCC FVGTRRSSVSGFGGVSVSGNRLPYAPRWLASAAIGYSFGVHTDVQLEVQHTGKMFTDDLN EECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHH TVAQTADGQRGLIKSATVWNASLNTRPFGDRTTLFLAVKNIGDKLYIADRSRGILPGAPR HHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCH LAQIGLSQRF HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]