| Definition | Caulobacter crescentus CB15 chromosome, complete genome. |
|---|---|
| Accession | NC_002696 |
| Length | 4,016,947 |
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The map label for this gene is 16124337
Identifier: 16124337
GI number: 16124337
Start: 84087
End: 84728
Strand: Direct
Name: 16124337
Synonym: CC_0082
Alternate gene names: NA
Gene position: 84087-84728 (Clockwise)
Preceding gene: 16124330
Following gene: 16124341
Centisome position: 2.09
GC content: 72.12
Gene sequence:
>642_bases ATGGCGACCCTGTCTCACGGCGAAATCTGGCGCGCGATCGACGCCCTGGCCGAGCGTTTCGACATGACGCCCTCGGCCAT GGCCAGGATGGCGGGCCTGGACCCCACCAGCTTCAACCGCTCCAAGCGCGGTTCGGCCGAGACCGGCCACGCGCGCTGGC CCTCGACCGAGAGCCTGTCCAAGCTGCTGGAGGCGACGGGGGTTAACTTCTCGGAGTTCGCCGCCCTGACCGAGCGATCG CCGGTCCGCGCGCCCGGCCGACGCGGCGCGCCGCTGATCGACCTGGCCCAGGCGGGCAAAGACGGCTTCTTCGATGAGGC GGGCATGCCCGTCGGCGCGGGCTGGGACGAGGCGCCGGCCCCGGATCTGGGCGAGGGCCTTTTCGCCCTGGAGGTGACGG GCGATGACCTCGCGCCCGTTTATCGTGACGGCGACCGGCTGCTGGTCTCGCCCACGCTGGAGCCGCGCAAGGGTGACCGC GTGGTGACGCGCACCCACGGCGGGGAGGTTCTGGTGCGGGAGCTGGGCCGGGTCACCGCGCGGAGCATCGAGCTCTTGGC CCTGGACCGCGTGAGCGGCGAGCGCCTGCTGTCACGCGACGAGGTCGCCTGGATCGCGCGGATCGTCTGGGTCAGCCAGT AG
Upstream 100 bases:
>100_bases AACGCTTACGTAAACGTCAACTGTAAGGCAGGCGATAGGTTTACTTTCCTAGCCCCGCTGGCGTACCCTTCTCGGCGAAG GCCGACTGGAGGAGGAGCCG
Downstream 100 bases:
>100_bases GCCGACCCGACAGATCGCTCAGGTCAGAGAGAGATCAGGTCCGCGGGCAGCTGGCGTGGCTGTCCAGCAGCCAGGCGATC AGCGGGCCGGCGGCCGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase; Transcriptional Regulator; Bacteriophage Repressor; Peptidase Family S; Transcriptional Regulator Protein; S24 Family Peptidase; Transcription Regulator Protein; Phage-Related Transcriptional Regulator Protein; LexA-Like Transcriptional Repressor; Phage-Related Transcriptional Regulator; Peptidase S; Peptidase Family
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MATLSHGEIWRAIDALAERFDMTPSAMARMAGLDPTSFNRSKRGSAETGHARWPSTESLSKLLEATGVNFSEFAALTERS PVRAPGRRGAPLIDLAQAGKDGFFDEAGMPVGAGWDEAPAPDLGEGLFALEVTGDDLAPVYRDGDRLLVSPTLEPRKGDR VVTRTHGGEVLVRELGRVTARSIELLALDRVSGERLLSRDEVAWIARIVWVSQ
Sequences:
>Translated_213_residues MATLSHGEIWRAIDALAERFDMTPSAMARMAGLDPTSFNRSKRGSAETGHARWPSTESLSKLLEATGVNFSEFAALTERS PVRAPGRRGAPLIDLAQAGKDGFFDEAGMPVGAGWDEAPAPDLGEGLFALEVTGDDLAPVYRDGDRLLVSPTLEPRKGDR VVTRTHGGEVLVRELGRVTARSIELLALDRVSGERLLSRDEVAWIARIVWVSQ >Mature_212_residues ATLSHGEIWRAIDALAERFDMTPSAMARMAGLDPTSFNRSKRGSAETGHARWPSTESLSKLLEATGVNFSEFAALTERSP VRAPGRRGAPLIDLAQAGKDGFFDEAGMPVGAGWDEAPAPDLGEGLFALEVTGDDLAPVYRDGDRLLVSPTLEPRKGDRV VTRTHGGEVLVRELGRVTARSIELLALDRVSGERLLSRDEVAWIARIVWVSQ
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23064; Mature: 22933
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLSHGEIWRAIDALAERFDMTPSAMARMAGLDPTSFNRSKRGSAETGHARWPSTESLS CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH KLLEATGVNFSEFAALTERSPVRAPGRRGAPLIDLAQAGKDGFFDEAGMPVGAGWDEAPA HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC PDLGEGLFALEVTGDDLAPVYRDGDRLLVSPTLEPRKGDRVVTRTHGGEVLVRELGRVTA CCCCCCEEEEEECCCCCCCCEECCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHH RSIELLALDRVSGERLLSRDEVAWIARIVWVSQ HHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATLSHGEIWRAIDALAERFDMTPSAMARMAGLDPTSFNRSKRGSAETGHARWPSTESLS CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH KLLEATGVNFSEFAALTERSPVRAPGRRGAPLIDLAQAGKDGFFDEAGMPVGAGWDEAPA HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC PDLGEGLFALEVTGDDLAPVYRDGDRLLVSPTLEPRKGDRVVTRTHGGEVLVRELGRVTA CCCCCCEEEEEECCCCCCCCEECCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHH RSIELLALDRVSGERLLSRDEVAWIARIVWVSQ HHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA