Definition Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence.
Accession NC_002679
Length 351,911

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The map label for this gene is 161621456

Identifier: 161621456

GI number: 161621456

Start: 349378

End: 350826

Strand: Direct

Name: 161621456

Synonym: mlr9393

Alternate gene names: NA

Gene position: 349378-350826 (Clockwise)

Preceding gene: 13488318

Following gene: 13488320

Centisome position: 99.28

GC content: 54.04

Gene sequence:

>1449_bases
ATGATGATGCTTGATCTGGACGGCTTTGACCGTCAGTTGCCCCTGGTTTGTGACTTGGATGGCACTCTGATAAGATCAGA
TACTTTCCACGAGAGCTTCTTTGAAGCCTTCTTTCATTCGCCACAGCACCTGCTTCGCACTTTTCCAAGTTGGTTCAAGG
GCCGCGCGGCGTTGAAGGAAACGCTGGCAAACGTTTGTTCGATTGAGCCGCGGGCGCTTCCCTATCGTGCAGAGATGTTG
GAATTGATGCGTGGCGCGAAAGCTGACGGGCGTGAAATTTATCTCGTTACGGCAGCGGATCAGAGCATAGCGGATAGTAT
CATTTGTCACCTTGGCGGCTTCGCCGGCGCGAAGGGAAGTGATGGGTCTTTGAACCTGAAGAGCCGCAACAAGTTGAAAT
GGCTTCAGGCTAGCTTCCCAGAGGGATTCATCTATGCGGGCGACAGTGCCGCCGACCTGCCAATCTGGGAGGCGGCTTCC
GGAGCGGTTTTGGTTGGCAACGGAGTGAAATACGCAAGCCAGCTCCGTAAAGCTGGCGTTGAGGTCAGGGCGATCAGTCC
TGAAAATACCAATCCGGTGAAGGACTGGCTGTTTGAACTCCGGGTACACCAGTGGTCAAAAAATGTGCTGATTTTCGTTC
CACTGTTTCTCGGCCATATTGCGGGCGATTTGCATGCAGTGCTGAGGACAATAGTCGCCTTTGTTGCTTTCGGCCTGATT
GCTTCGGCAACCTATATCATCAACGATCTGGCTGATTTGGAGGCGGACCGGGCGCATGCGACCAAGCGCTTCCGGGCGAT
TGCTGCAGGCAGAATAAGCGTTATAAACGGCTTTTTGGCGAGCATTTTTATGCTGGGTGCGGGCATTGGGGTGGCCTTAC
TTTTGCACCCTCAATTCGCACTGGCTGTCGCAGCCTATCTGGTGCTGACGCTGGCCTATTCATTCCGCTTGAAGCGTTAC
GCGTTACTCGATGTGACGGTCATCGGAGCGTTGTTCACACTGAGGATTGTCATGGGTCAGGTGCTGAATGATCTGGCATT
CTCGCCTTGGCTCTTGTCCTTTTCAGCCATGTTCTTCTTCTCGCTGTCTCTGGCAAAGCGTCATGTGGAAGCAATGCGCG
CGTGCTCAAAGGGGAGGGACGCCATCAAAGGTCGCGGATACTTGCCTGACGATTGGCCGCTCACCTTGGGCTATGGCCTT
GCTTCCGCCTCGGCTTCGATCGTCATCATGCTGCTTTTCATCGCGCTCGAAGCCAGAGCCACCCAAGAATATCACAATCC
AGCATGGCTCTATGTTGCGCCGGCGGGCGTGTTCATGTGGCTGCAAAGGATATGGCTCCTGAGTCATCGCATGGGTTTGC
ACGACGATCCTATTGTCTTTGCGCTCAAGGACAAGACCAGCTTGTTGATCGGCGCCATCATCGCATTGGCGTTTGCGTTG
GCTGTGTAA

Upstream 100 bases:

>100_bases
AGTGATCCTTTGCCCGTATCGGACCTTCGGCGCCGATAATAATTTCGTCTTTGATGAAGGCGCAGCGATGAAGCTGTACA
AACCTGATTTGGGGGATGAG

Downstream 100 bases:

>100_bases
AACAAAGCGGTTGCCAATATGCAAGAGACGACCTTAGTAACCCTGAATGCGCCCCTCGTACTCCTGACTGGAGCTGCCGG
CTGGTTGGGCGGGCGCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MMMLDLDGFDRQLPLVCDLDGTLIRSDTFHESFFEAFFHSPQHLLRTFPSWFKGRAALKETLANVCSIEPRALPYRAEML
ELMRGAKADGREIYLVTAADQSIADSIICHLGGFAGAKGSDGSLNLKSRNKLKWLQASFPEGFIYAGDSAADLPIWEAAS
GAVLVGNGVKYASQLRKAGVEVRAISPENTNPVKDWLFELRVHQWSKNVLIFVPLFLGHIAGDLHAVLRTIVAFVAFGLI
ASATYIINDLADLEADRAHATKRFRAIAAGRISVINGFLASIFMLGAGIGVALLLHPQFALAVAAYLVLTLAYSFRLKRY
ALLDVTVIGALFTLRIVMGQVLNDLAFSPWLLSFSAMFFFSLSLAKRHVEAMRACSKGRDAIKGRGYLPDDWPLTLGYGL
ASASASIVIMLLFIALEARATQEYHNPAWLYVAPAGVFMWLQRIWLLSHRMGLHDDPIVFALKDKTSLLIGAIIALAFAL
AV

Sequences:

>Translated_482_residues
MMMLDLDGFDRQLPLVCDLDGTLIRSDTFHESFFEAFFHSPQHLLRTFPSWFKGRAALKETLANVCSIEPRALPYRAEML
ELMRGAKADGREIYLVTAADQSIADSIICHLGGFAGAKGSDGSLNLKSRNKLKWLQASFPEGFIYAGDSAADLPIWEAAS
GAVLVGNGVKYASQLRKAGVEVRAISPENTNPVKDWLFELRVHQWSKNVLIFVPLFLGHIAGDLHAVLRTIVAFVAFGLI
ASATYIINDLADLEADRAHATKRFRAIAAGRISVINGFLASIFMLGAGIGVALLLHPQFALAVAAYLVLTLAYSFRLKRY
ALLDVTVIGALFTLRIVMGQVLNDLAFSPWLLSFSAMFFFSLSLAKRHVEAMRACSKGRDAIKGRGYLPDDWPLTLGYGL
ASASASIVIMLLFIALEARATQEYHNPAWLYVAPAGVFMWLQRIWLLSHRMGLHDDPIVFALKDKTSLLIGAIIALAFAL
AV
>Mature_482_residues
MMMLDLDGFDRQLPLVCDLDGTLIRSDTFHESFFEAFFHSPQHLLRTFPSWFKGRAALKETLANVCSIEPRALPYRAEML
ELMRGAKADGREIYLVTAADQSIADSIICHLGGFAGAKGSDGSLNLKSRNKLKWLQASFPEGFIYAGDSAADLPIWEAAS
GAVLVGNGVKYASQLRKAGVEVRAISPENTNPVKDWLFELRVHQWSKNVLIFVPLFLGHIAGDLHAVLRTIVAFVAFGLI
ASATYIINDLADLEADRAHATKRFRAIAAGRISVINGFLASIFMLGAGIGVALLLHPQFALAVAAYLVLTLAYSFRLKRY
ALLDVTVIGALFTLRIVMGQVLNDLAFSPWLLSFSAMFFFSLSLAKRHVEAMRACSKGRDAIKGRGYLPDDWPLTLGYGL
ASASASIVIMLLFIALEARATQEYHNPAWLYVAPAGVFMWLQRIWLLSHRMGLHDDPIVFALKDKTSLLIGAIIALAFAL
AV

Specific function: Possible permease/transporter [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: NA

Molecular weight: Translated: 52935; Mature: 52935

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMLDLDGFDRQLPLVCDLDGTLIRSDTFHESFFEAFFHSPQHLLRTFPSWFKGRAALKE
CEEEECCCCCCCCCEEECCCCCEEECCHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHH
TLANVCSIEPRALPYRAEMLELMRGAKADGREIYLVTAADQSIADSIICHLGGFAGAKGS
HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCC
DGSLNLKSRNKLKWLQASFPEGFIYAGDSAADLPIWEAASGAVLVGNGVKYASQLRKAGV
CCCEEECCCCHHHHHHHCCCCCEEEECCCCCCCCCEECCCCCEEEECCHHHHHHHHHCCC
EVRAISPENTNPVKDWLFELRVHQWSKNVLIFVPLFLGHIAGDLHAVLRTIVAFVAFGLI
EEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASATYIINDLADLEADRAHATKRFRAIAAGRISVINGFLASIFMLGAGIGVALLLHPQFA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHH
LAVAAYLVLTLAYSFRLKRYALLDVTVIGALFTLRIVMGQVLNDLAFSPWLLSFSAMFFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SLSLAKRHVEAMRACSKGRDAIKGRGYLPDDWPLTLGYGLASASASIVIMLLFIALEARA
HHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
TQEYHNPAWLYVAPAGVFMWLQRIWLLSHRMGLHDDPIVFALKDKTSLLIGAIIALAFAL
HHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
AV
CC
>Mature Secondary Structure
MMMLDLDGFDRQLPLVCDLDGTLIRSDTFHESFFEAFFHSPQHLLRTFPSWFKGRAALKE
CEEEECCCCCCCCCEEECCCCCEEECCHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHH
TLANVCSIEPRALPYRAEMLELMRGAKADGREIYLVTAADQSIADSIICHLGGFAGAKGS
HHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCC
DGSLNLKSRNKLKWLQASFPEGFIYAGDSAADLPIWEAASGAVLVGNGVKYASQLRKAGV
CCCEEECCCCHHHHHHHCCCCCEEEECCCCCCCCCEECCCCCEEEECCHHHHHHHHHCCC
EVRAISPENTNPVKDWLFELRVHQWSKNVLIFVPLFLGHIAGDLHAVLRTIVAFVAFGLI
EEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASATYIINDLADLEADRAHATKRFRAIAAGRISVINGFLASIFMLGAGIGVALLLHPQFA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHH
LAVAAYLVLTLAYSFRLKRYALLDVTVIGALFTLRIVMGQVLNDLAFSPWLLSFSAMFFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SLSLAKRHVEAMRACSKGRDAIKGRGYLPDDWPLTLGYGLASASASIVIMLLFIALEARA
HHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
TQEYHNPAWLYVAPAGVFMWLQRIWLLSHRMGLHDDPIVFALKDKTSLLIGAIIALAFAL
HHHHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHH
AV
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]