Definition Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence.
Accession NC_002679
Length 351,911

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The map label for this gene is 13488324

Identifier: 13488324

GI number: 13488324

Start: 60846

End: 61016

Strand: Reverse

Name: 13488324

Synonym: msl9066

Alternate gene names: NA

Gene position: 61016-60846 (Counterclockwise)

Preceding gene: 13488061

Following gene: 13488060

Centisome position: 17.34

GC content: 61.99

Gene sequence:

>171_bases
GTGCAGAGCGGCCTGTCACTAAAGAAGGAAATCTTTGTAGCCTCCATTCATGAGGGCGCGGCCACGAGAGACGGCGCGGC
GAATGCGGTCGCGCAGATGATCGCGAGGATCCCCCCAGTCGGCATTGACGCGCCGTTGACCAACCAGAGCATCGGCGAGC
TCGCGATGTGA

Upstream 100 bases:

>100_bases
CTTGACATTGTCGGCCATAGGACAATGCCGACCGTGCCTCCCGGCATCGAGCGCAAACTGGTGGTGACCGGATTTGGCTC
CGGACCGTTCGCCGGCTGAC

Downstream 100 bases:

>100_bases
CGCCCCAGCAAGTGCGCCGTCGAGCGCACGAAGAACGAAGGTTAGACGGGGACCGCGTTTTTCCGGCGGAAACAAGCGGG
CGGGCAGATGTTGACCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 56; Mature: 56

Protein sequence:

>56_residues
MQSGLSLKKEIFVASIHEGAATRDGAANAVAQMIARIPPVGIDAPLTNQSIGELAM

Sequences:

>Translated_56_residues
MQSGLSLKKEIFVASIHEGAATRDGAANAVAQMIARIPPVGIDAPLTNQSIGELAM
>Mature_56_residues
MQSGLSLKKEIFVASIHEGAATRDGAANAVAQMIARIPPVGIDAPLTNQSIGELAM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5762; Mature: 5762

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSGLSLKKEIFVASIHEGAATRDGAANAVAQMIARIPPVGIDAPLTNQSIGELAM
CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQSGLSLKKEIFVASIHEGAATRDGAANAVAQMIARIPPVGIDAPLTNQSIGELAM
CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA