| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488308
Identifier: 13488308
GI number: 13488308
Start: 322347
End: 323399
Strand: Direct
Name: 13488308
Synonym: mlr9369
Alternate gene names: NA
Gene position: 322347-323399 (Clockwise)
Preceding gene: 13488307
Following gene: 13488309
Centisome position: 91.6
GC content: 65.62
Gene sequence:
>1053_bases TTGGCGCGGCTCGACGAGCGGCTGGCCCGCTCGCTGGTCCGCGAAGGGTTCATCGAACGCCAGCACTTCGCTGACGCGGC CGCAGCACTGTGGCTCGAGGGCGAGCTTGTCCACCTCGAGGACCTCGTTCTGCACGACGCCCACATGGACATCCGCACCC CGACCCATGAACTCACGCGGGCACATGCGGTGCTGCGGACCCGTCGGCGAATTCTGTCGCAAAAGCCGGACTGGGCGCTC GGCCGGGACGGTTTTTTGGCCCTGACCGGCCGGGGTGGCGCCATGCCGGCGGCGGAGGGCCAAAAAAACCGGGAAGGGCA GGAGGCTGGAGCCAGTTCCGTTGAAGCCGATGTTCGGGAGGATGCTGAGGCCGATCTTCTGGCCGAAGAATTTGCCGAGA TCGATGCCGTCCTGGCACGCTCATCAAGGATCCTGAACGGCGCCGACGTGCCGGCGAGGCCGCCGCGTTCGGACGATCGG CCATACCTGATCTACGATCTCGACTGGAATGAAGAAGAACGGCTGGCCGAATGGCAGGCCGTGCTCTCCGAGACGCGGAA GTGGCCGTTGGTGATGCGCGCCGCGATCCTCCTCGAGGCCTGGCAAGACATCGAGGTGCTGCAGCATGCCACCTGGCTTG GATCACTGCTCGTAGCAGCGCTGCTGCGGCAAGAGGGCCTTGCCGCGCACCATCTCGCCGGACTTCATGTCGGGGCAAAA ACCATTCCGCGGGAGCGGCGGCGGGCGCGCAATCGGAGCGACCGGCTGCTGGCCTCCCTCGATGCCATTCACGACGCAGC CGCGGCTGGCCTGAAGGAGCATGACCGTCTCGTACTGGCGAAAAGCCAGATGGAGCGGCGGCTCAAGCAACGCCGCGCCA GCTCGAAACTGCCTGACCTGCTCGAGCTTGTGCTGTCGCGGCCGATTGTCTCCACCGGCATGGTTCAGGAGGTGCTAAAA GTCTCGAAGCAGGGGGCGCTCAACCTGGTCGGCGAGCTAGGACTGCGCGAGATGACGGGCAGGGGACGGTTTCGGGCGTG GGGGATTATGTAA
Upstream 100 bases:
>100_bases CGTTAGCGAAAATTTGCGCCTCCGATAGCGTGCAAACCTAACCGCCACATGACATTCCGGCATTTGAAATCGGGAAGTAA AAGCGACAGCCACCGAGGTT
Downstream 100 bases:
>100_bases TCCCAAAAGCCTGCCATCCCGTGCGGATCGCGCGCTTGGTCAACGCCATTGGGACACGCACGCTTGAAGTCAGGCGGCGC GAATCGCGCCTGATTGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MARLDERLARSLVREGFIERQHFADAAAALWLEGELVHLEDLVLHDAHMDIRTPTHELTRAHAVLRTRRRILSQKPDWAL GRDGFLALTGRGGAMPAAEGQKNREGQEAGASSVEADVREDAEADLLAEEFAEIDAVLARSSRILNGADVPARPPRSDDR PYLIYDLDWNEEERLAEWQAVLSETRKWPLVMRAAILLEAWQDIEVLQHATWLGSLLVAALLRQEGLAAHHLAGLHVGAK TIPRERRRARNRSDRLLASLDAIHDAAAAGLKEHDRLVLAKSQMERRLKQRRASSKLPDLLELVLSRPIVSTGMVQEVLK VSKQGALNLVGELGLREMTGRGRFRAWGIM
Sequences:
>Translated_350_residues MARLDERLARSLVREGFIERQHFADAAAALWLEGELVHLEDLVLHDAHMDIRTPTHELTRAHAVLRTRRRILSQKPDWAL GRDGFLALTGRGGAMPAAEGQKNREGQEAGASSVEADVREDAEADLLAEEFAEIDAVLARSSRILNGADVPARPPRSDDR PYLIYDLDWNEEERLAEWQAVLSETRKWPLVMRAAILLEAWQDIEVLQHATWLGSLLVAALLRQEGLAAHHLAGLHVGAK TIPRERRRARNRSDRLLASLDAIHDAAAAGLKEHDRLVLAKSQMERRLKQRRASSKLPDLLELVLSRPIVSTGMVQEVLK VSKQGALNLVGELGLREMTGRGRFRAWGIM >Mature_349_residues ARLDERLARSLVREGFIERQHFADAAAALWLEGELVHLEDLVLHDAHMDIRTPTHELTRAHAVLRTRRRILSQKPDWALG RDGFLALTGRGGAMPAAEGQKNREGQEAGASSVEADVREDAEADLLAEEFAEIDAVLARSSRILNGADVPARPPRSDDRP YLIYDLDWNEEERLAEWQAVLSETRKWPLVMRAAILLEAWQDIEVLQHATWLGSLLVAALLRQEGLAAHHLAGLHVGAKT IPRERRRARNRSDRLLASLDAIHDAAAAGLKEHDRLVLAKSQMERRLKQRRASSKLPDLLELVLSRPIVSTGMVQEVLKV SKQGALNLVGELGLREMTGRGRFRAWGIM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011670 - InterPro: IPR021068 [H]
Pfam domain/function: PF07756 DUF1612; PF11972 HTH_13 [H]
EC number: NA
Molecular weight: Translated: 39173; Mature: 39042
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLDERLARSLVREGFIERQHFADAAAALWLEGELVHLEDLVLHDAHMDIRTPTHELTR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCHHHHHH AHAVLRTRRRILSQKPDWALGRDGFLALTGRGGAMPAAEGQKNREGQEAGASSVEADVRE HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHH DAEADLLAEEFAEIDAVLARSSRILNGADVPARPPRSDDRPYLIYDLDWNEEERLAEWQA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH VLSETRKWPLVMRAAILLEAWQDIEVLQHATWLGSLLVAALLRQEGLAAHHLAGLHVGAK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHH TIPRERRRARNRSDRLLASLDAIHDAAAAGLKEHDRLVLAKSQMERRLKQRRASSKLPDL HCCHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LELVLSRPIVSTGMVQEVLKVSKQGALNLVGELGLREMTGRGRFRAWGIM HHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEECCCC >Mature Secondary Structure ARLDERLARSLVREGFIERQHFADAAAALWLEGELVHLEDLVLHDAHMDIRTPTHELTR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCHHHHHH AHAVLRTRRRILSQKPDWALGRDGFLALTGRGGAMPAAEGQKNREGQEAGASSVEADVRE HHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHH DAEADLLAEEFAEIDAVLARSSRILNGADVPARPPRSDDRPYLIYDLDWNEEERLAEWQA CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH VLSETRKWPLVMRAAILLEAWQDIEVLQHATWLGSLLVAALLRQEGLAAHHLAGLHVGAK HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHH TIPRERRRARNRSDRLLASLDAIHDAAAAGLKEHDRLVLAKSQMERRLKQRRASSKLPDL HCCHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LELVLSRPIVSTGMVQEVLKVSKQGALNLVGELGLREMTGRGRFRAWGIM HHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]