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The map label for this gene is scpB [H]

Identifier: 13488307

GI number: 13488307

Start: 317042

End: 317731

Strand: Direct

Name: scpB [H]

Synonym: mlr9362

Alternate gene names: 13488307

Gene position: 317042-317731 (Clockwise)

Preceding gene: 13488306

Following gene: 13488308

Centisome position: 90.09

GC content: 62.32

Gene sequence:

>690_bases
ATGGTGGAGAGTGCACGTAGGAGAAGGGGAGGGGCGCAAGGAGGCGACGGCCGGCCAAATGACCATTTGTTTGATCGCGA
GCTGGATCACCTGCCGCCGGAGGCGCGCTGGCGCGAATGGATGAACCGTGTCGAAGCAACGATCTTTGCGGCCAGCCAAC
CGGTGACACGCGAAACGCTCGCCCGGATTGTCGGCAAAAGCTGCAGCATCGATCTTTTGATCGACGACATTCGCGAGGAA
TTGCGCGGCCGACCCTATGACCTCGTCGCCGTCGCCGGTGGCTGGAAGCACCTGACCCGGCCTGCCTATGCCGACGCCAT
CCGCAGTGCAGCCGGCGGCAACGATCGCGCGGTACACCTCTCGCAGTCAGAGGTGCTGGTGCTGATGTGCATCGCCTACT
TCCAGCCAATCACCCGCACCGAGTTGTCGTCATTCTTCGGCAAGGAGATCAGTCGCGATTTTATTGGTCATCTGCGCGGT
GCCGGTCTGATCGCTTCCGGTCCGCGTAGCCCGACCCCGGGCGCGCCCTACACCTACGTGACGACAAAAGAGTTCCTGCT
GGAGTTCGGGCTCGAAACCTTGCGCGATCTTCCCGACTTCGAGGCGCTGGAGGATGCCGGGCTGCTGTCGAAGGAAAAAG
CTGCTTGCGGGCGACATCATGCCGGGGTTTTCGGGCCCCGGCGAGAATAA

Upstream 100 bases:

>100_bases
ACCGTGGGCTGCGCCGCCTGTTCGACCGGCTGGTCGAACTCGGCGCCGTGCGCGAGCTGTCCGGCCGTCCGGCCTTCCGT
ATCTACGGGCTGTGAAGACG

Downstream 100 bases:

>100_bases
TGCCGACGCCGACGAATAGAGGCCCTGTGCCTGGGCCGGCGGCGACCGGCCATCGTCACCGCAGCTTCTCGAGAGATCGG
ACAGCAAGATCGATTTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MVESARRRRGGAQGGDGRPNDHLFDRELDHLPPEARWREWMNRVEATIFAASQPVTRETLARIVGKSCSIDLLIDDIREE
LRGRPYDLVAVAGGWKHLTRPAYADAIRSAAGGNDRAVHLSQSEVLVLMCIAYFQPITRTELSSFFGKEISRDFIGHLRG
AGLIASGPRSPTPGAPYTYVTTKEFLLEFGLETLRDLPDFEALEDAGLLSKEKAACGRHHAGVFGPRRE

Sequences:

>Translated_229_residues
MVESARRRRGGAQGGDGRPNDHLFDRELDHLPPEARWREWMNRVEATIFAASQPVTRETLARIVGKSCSIDLLIDDIREE
LRGRPYDLVAVAGGWKHLTRPAYADAIRSAAGGNDRAVHLSQSEVLVLMCIAYFQPITRTELSSFFGKEISRDFIGHLRG
AGLIASGPRSPTPGAPYTYVTTKEFLLEFGLETLRDLPDFEALEDAGLLSKEKAACGRHHAGVFGPRRE
>Mature_229_residues
MVESARRRRGGAQGGDGRPNDHLFDRELDHLPPEARWREWMNRVEATIFAASQPVTRETLARIVGKSCSIDLLIDDIREE
LRGRPYDLVAVAGGWKHLTRPAYADAIRSAAGGNDRAVHLSQSEVLVLMCIAYFQPITRTELSSFFGKEISRDFIGHLRG
AGLIASGPRSPTPGAPYTYVTTKEFLLEFGLETLRDLPDFEALEDAGLLSKEKAACGRHHAGVFGPRRE

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 25397; Mature: 25397

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVESARRRRGGAQGGDGRPNDHLFDRELDHLPPEARWREWMNRVEATIFAASQPVTRETL
CCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
ARIVGKSCSIDLLIDDIREELRGRPYDLVAVAGGWKHLTRPAYADAIRSAAGGNDRAVHL
HHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCHHHHHHHHHHCCCCCCEEEE
SQSEVLVLMCIAYFQPITRTELSSFFGKEISRDFIGHLRGAGLIASGPRSPTPGAPYTYV
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEE
TTKEFLLEFGLETLRDLPDFEALEDAGLLSKEKAACGRHHAGVFGPRRE
HHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MVESARRRRGGAQGGDGRPNDHLFDRELDHLPPEARWREWMNRVEATIFAASQPVTRETL
CCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
ARIVGKSCSIDLLIDDIREELRGRPYDLVAVAGGWKHLTRPAYADAIRSAAGGNDRAVHL
HHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCHHHHHHHHHHCCCCCCEEEE
SQSEVLVLMCIAYFQPITRTELSSFFGKEISRDFIGHLRGAGLIASGPRSPTPGAPYTYV
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEE
TTKEFLLEFGLETLRDLPDFEALEDAGLLSKEKAACGRHHAGVFGPRRE
HHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]