| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488306
Identifier: 13488306
GI number: 13488306
Start: 316014
End: 317036
Strand: Direct
Name: 13488306
Synonym: mlr9360
Alternate gene names: NA
Gene position: 316014-317036 (Clockwise)
Preceding gene: 13488305
Following gene: 13488307
Centisome position: 89.8
GC content: 69.5
Gene sequence:
>1023_bases ATGATTCTGCGTCCCAAACCCTCTCCGCGCCACCACGCCACGCTTGCCGGTGCCCCTTCGACCGCGCCGATGACAACGGT GCCGGCCTGGCTGCGCCGCGCCGTCCCGGATGCACAAGGCCTTGCGAGCAAAAACGCAGAGGATGTGGCGCTCGTTGTCG GCGCTGCCATAGGCGCGCTCGATGCCGTGGTCCGCCGGCAGGAGCGGTGGTCCGGCGCCTGGCGGCAGCGCCTGGCGCTT TCGGCGGCCGCGGCAACGGCGAAGCAGGCCGGCCGCGTCGAGGACGAAAGCGCGCTGCGCGACGCCGTGCTGCTTACACG CCCGGGCGATTTTTTGTCCGTCGGTCCCGCCGGATCGATGCTGTTGGCTTGGCGCCGGCTGGCCAGCACGCCTGCCGAGA AACTGCTGACCGAGGCCAGCATCGGCGCGGTGCTGGATGACCTCGGTCTCCGCCGCGACGACGACGCAGTCAGCGACTTG GCGGACGATCTTCGACAGCTCCCCGGGGGCATCGGAATGGTCGGCATGCTGACCGGCGCGTTCACGGCTGCCGAAAGATA TGGCTTCGCACGAGCCTTCGGATGCTGGCTCGCCGACGCCCTGCTGGCGCATCGGCTGGGTTGGGCCCACGCGGTGCCGC TGCTGGGCGCCGAGGCAGGCTTGGGTACAAGCGCCCGCCCGCGTCGATCGGCAGCCAGCTCTCTGGCGACAGGCATTGAG ACAGATCCTGAGCGTGCCAAAAGTCTGCTTGCCGCGCAGGCGCGCGCTGCCCTGCGCGCCATTGATCTTTCCGCCGAGCT TGAGCGCCGCGCGGGCCGGCTGCTTGCTGTTGCCCCGAAACTCAGGGCCAAGGCGGCGGACGCTGTTGTCGACAAGCTCC TGTCCGACGACGCGATCGTTGCCTCGGAAAAGATCGCCGGCATGAGTGACCGTGGGCTGCGCCGCCTGTTCGACCGGCTG GTCGAACTCGGCGCCGTGCGCGAGCTGTCCGGCCGTCCGGCCTTCCGTATCTACGGGCTGTGA
Upstream 100 bases:
>100_bases GATAATGCAAGATTATCATTCATTACACGCAAACGACAGGCGCGGCGGTTAGGAGGTGATGTGCTTGCCAAAAGCGCCGT CGTGATTCATCGTGCTTTCG
Downstream 100 bases:
>100_bases AGACGATGGTGGAGAGTGCACGTAGGAGAAGGGGAGGGGCGCAAGGAGGCGACGGCCGGCCAAATGACCATTTGTTTGAT CGCGAGCTGGATCACCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MILRPKPSPRHHATLAGAPSTAPMTTVPAWLRRAVPDAQGLASKNAEDVALVVGAAIGALDAVVRRQERWSGAWRQRLAL SAAAATAKQAGRVEDESALRDAVLLTRPGDFLSVGPAGSMLLAWRRLASTPAEKLLTEASIGAVLDDLGLRRDDDAVSDL ADDLRQLPGGIGMVGMLTGAFTAAERYGFARAFGCWLADALLAHRLGWAHAVPLLGAEAGLGTSARPRRSAASSLATGIE TDPERAKSLLAAQARAALRAIDLSAELERRAGRLLAVAPKLRAKAADAVVDKLLSDDAIVASEKIAGMSDRGLRRLFDRL VELGAVRELSGRPAFRIYGL
Sequences:
>Translated_340_residues MILRPKPSPRHHATLAGAPSTAPMTTVPAWLRRAVPDAQGLASKNAEDVALVVGAAIGALDAVVRRQERWSGAWRQRLAL SAAAATAKQAGRVEDESALRDAVLLTRPGDFLSVGPAGSMLLAWRRLASTPAEKLLTEASIGAVLDDLGLRRDDDAVSDL ADDLRQLPGGIGMVGMLTGAFTAAERYGFARAFGCWLADALLAHRLGWAHAVPLLGAEAGLGTSARPRRSAASSLATGIE TDPERAKSLLAAQARAALRAIDLSAELERRAGRLLAVAPKLRAKAADAVVDKLLSDDAIVASEKIAGMSDRGLRRLFDRL VELGAVRELSGRPAFRIYGL >Mature_340_residues MILRPKPSPRHHATLAGAPSTAPMTTVPAWLRRAVPDAQGLASKNAEDVALVVGAAIGALDAVVRRQERWSGAWRQRLAL SAAAATAKQAGRVEDESALRDAVLLTRPGDFLSVGPAGSMLLAWRRLASTPAEKLLTEASIGAVLDDLGLRRDDDAVSDL ADDLRQLPGGIGMVGMLTGAFTAAERYGFARAFGCWLADALLAHRLGWAHAVPLLGAEAGLGTSARPRRSAASSLATGIE TDPERAKSLLAAQARAALRAIDLSAELERRAGRLLAVAPKLRAKAADAVVDKLLSDDAIVASEKIAGMSDRGLRRLFDRL VELGAVRELSGRPAFRIYGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35801; Mature: 35801
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRPKPSPRHHATLAGAPSTAPMTTVPAWLRRAVPDAQGLASKNAEDVALVVGAAIGAL CCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHH DAVVRRQERWSGAWRQRLALSAAAATAKQAGRVEDESALRDAVLLTRPGDFLSVGPAGSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCCEEECCCHHH LLAWRRLASTPAEKLLTEASIGAVLDDLGLRRDDDAVSDLADDLRQLPGGIGMVGMLTGA HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH FTAAERYGFARAFGCWLADALLAHRLGWAHAVPLLGAEAGLGTSARPRRSAASSLATGIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC TDPERAKSLLAAQARAALRAIDLSAELERRAGRLLAVAPKLRAKAADAVVDKLLSDDAIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCHHH ASEKIAGMSDRGLRRLFDRLVELGAVRELSGRPAFRIYGL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure MILRPKPSPRHHATLAGAPSTAPMTTVPAWLRRAVPDAQGLASKNAEDVALVVGAAIGAL CCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHH DAVVRRQERWSGAWRQRLALSAAAATAKQAGRVEDESALRDAVLLTRPGDFLSVGPAGSM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCCEEECCCHHH LLAWRRLASTPAEKLLTEASIGAVLDDLGLRRDDDAVSDLADDLRQLPGGIGMVGMLTGA HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH FTAAERYGFARAFGCWLADALLAHRLGWAHAVPLLGAEAGLGTSARPRRSAASSLATGIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC TDPERAKSLLAAQARAALRAIDLSAELERRAGRLLAVAPKLRAKAADAVVDKLLSDDAIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCCHHH ASEKIAGMSDRGLRRLFDRLVELGAVRELSGRPAFRIYGL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA