Click here to switch to the map view.

The map label for this gene is 13488304

Identifier: 13488304

GI number: 13488304

Start: 305483

End: 306790

Strand: Direct

Name: 13488304

Synonym: mlr9349

Alternate gene names: NA

Gene position: 305483-306790 (Clockwise)

Preceding gene: 13488303

Following gene: 13488305

Centisome position: 86.81

GC content: 63.84

Gene sequence:

>1308_bases
GTGCAAAAGCAGCTTGGTCACGCTTCCGCCGTCGCGACGTCAATCTCACCAAAGCCAGCGGACTCTAACCCCTACGAACC
CGCGCGGCGCGAGCCTCGATTCTTCCTTGCACAATCGGAATTGCACTCCATAATTGCAAGGATGATTGAGCGCCGCATCA
CGACCGAACTCACCGAGTTGCTGGACAGCATGCCCGCCGTGGCGCTGCTCGGACCGCGTCAGGTTGGTAAGACCACTCTC
GCGCTGGAAATAGCCGAACGGCGTCCTTCGATCTATCTCGACCTCGAATCCGACGCCGACCGCGCCCGACTTGCCGAGCC
GGAACTTTATCTGGCCGATCATGAGGACAAGCTGGTCATCCTGGATGAGGTACACCGGCTACCTAACCTGTTCCAGAACC
TGCGCGGGCTGATCGACCGCGGTCGGCGCAGCGGCCGCAAAGCTGGCCGCTTCCTGCTGTTGGGATCGGCGTCGATCGAT
CTTCTGAAGCAGTCAGGCGAAACCCTTGCCGGCCGCATCGCCTATCTCGAAATGCATCCGATCGACGGTCTCGAGGTTGG
CGCCGGCGATCTTGGTCCGCTATGGGTGCGCGGCGGCTTCCCCGACAGCTTTCTGGCCGCCAGCGACCGCGCCAGCCAGC
GGTGGCGGTTGGATTTCATCCGCACCTATCTGGAGCGCGATATCCCCCTCCTCGGTCCGCGCATCCCGGCCGAGACGCTG
CGCCGCTTCTGGACCATGCTGGCGCACCACCAGGCCGGCCTGCTCAACGCCGCCGAGTTCGCCCGCGCGCTCGGCGTCGA
CGGCAAGACTGTCGCGTCTTATCTCGACCTGCTTGTCGATCTACTGCTGGTTCGCCGGCTGGAACCTTGGCACGCCAACG
TCGGCAAGCGCTTGGTCAAATCACCGCGCGTCTATGTCCGCGACAGCGGCATCACCCATACGCTGCTTGGTCTCGCCACG
CAGGAAGACGTGCTTGGACATCCGGTGGCCGGCGCCTCCTGGGAAGGCTTTGTCATCGAAACCCTCACTGCCGCCGCCCC
CGCCGGCACGCTGAGCCATTTCTACCGAACCGCCGCGGGCGCGGAGATCGACCTGCTGCTTACATTGCCGGGCCAGCGCC
TCTGGGCCATCGAAGTCAAGCGTAGCCTGACGCCGAAGGTGGAAAAAGGTTTCCATCAGGCCTGCGAGGACCTTGCTCCG
GAGCGGCGCATCGTCGTCTTTCCGGGAGCGGAGCGTTTTCCGCTCAAGCATGGCATCGAAGCGATGCCCCTGCGGGACTT
AGGCCGGGCGCTGCTTGGCGAAGCATAA

Upstream 100 bases:

>100_bases
AGCCTTAACTTTCGTTTTACTCCTTATAGAGGAGATGGCCTCTCTCGTCGATCAAAACCCCGAAATGGCTTTGGCACCGT
CTGCGCTCGACGAGCGCTAT

Downstream 100 bases:

>100_bases
TGCAAAAGCCGGCGAGCGGCGCGGGTTCCTTGCCTGACCAGATTGGGCAGAGGGCTGAGAGCTCTTAGGGCCATAACTCC
CACGGCTGCGGCACTCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MQKQLGHASAVATSISPKPADSNPYEPARREPRFFLAQSELHSIIARMIERRITTELTELLDSMPAVALLGPRQVGKTTL
ALEIAERRPSIYLDLESDADRARLAEPELYLADHEDKLVILDEVHRLPNLFQNLRGLIDRGRRSGRKAGRFLLLGSASID
LLKQSGETLAGRIAYLEMHPIDGLEVGAGDLGPLWVRGGFPDSFLAASDRASQRWRLDFIRTYLERDIPLLGPRIPAETL
RRFWTMLAHHQAGLLNAAEFARALGVDGKTVASYLDLLVDLLLVRRLEPWHANVGKRLVKSPRVYVRDSGITHTLLGLAT
QEDVLGHPVAGASWEGFVIETLTAAAPAGTLSHFYRTAAGAEIDLLLTLPGQRLWAIEVKRSLTPKVEKGFHQACEDLAP
ERRIVVFPGAERFPLKHGIEAMPLRDLGRALLGEA

Sequences:

>Translated_435_residues
MQKQLGHASAVATSISPKPADSNPYEPARREPRFFLAQSELHSIIARMIERRITTELTELLDSMPAVALLGPRQVGKTTL
ALEIAERRPSIYLDLESDADRARLAEPELYLADHEDKLVILDEVHRLPNLFQNLRGLIDRGRRSGRKAGRFLLLGSASID
LLKQSGETLAGRIAYLEMHPIDGLEVGAGDLGPLWVRGGFPDSFLAASDRASQRWRLDFIRTYLERDIPLLGPRIPAETL
RRFWTMLAHHQAGLLNAAEFARALGVDGKTVASYLDLLVDLLLVRRLEPWHANVGKRLVKSPRVYVRDSGITHTLLGLAT
QEDVLGHPVAGASWEGFVIETLTAAAPAGTLSHFYRTAAGAEIDLLLTLPGQRLWAIEVKRSLTPKVEKGFHQACEDLAP
ERRIVVFPGAERFPLKHGIEAMPLRDLGRALLGEA
>Mature_435_residues
MQKQLGHASAVATSISPKPADSNPYEPARREPRFFLAQSELHSIIARMIERRITTELTELLDSMPAVALLGPRQVGKTTL
ALEIAERRPSIYLDLESDADRARLAEPELYLADHEDKLVILDEVHRLPNLFQNLRGLIDRGRRSGRKAGRFLLLGSASID
LLKQSGETLAGRIAYLEMHPIDGLEVGAGDLGPLWVRGGFPDSFLAASDRASQRWRLDFIRTYLERDIPLLGPRIPAETL
RRFWTMLAHHQAGLLNAAEFARALGVDGKTVASYLDLLVDLLLVRRLEPWHANVGKRLVKSPRVYVRDSGITHTLLGLAT
QEDVLGHPVAGASWEGFVIETLTAAAPAGTLSHFYRTAAGAEIDLLLTLPGQRLWAIEVKRSLTPKVEKGFHQACEDLAP
ERRIVVFPGAERFPLKHGIEAMPLRDLGRALLGEA

Specific function: Unknown

COG id: COG1373

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 48170; Mature: 48170

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKQLGHASAVATSISPKPADSNPYEPARREPRFFLAQSELHSIIARMIERRITTELTEL
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
LDSMPAVALLGPRQVGKTTLALEIAERRPSIYLDLESDADRARLAEPELYLADHEDKLVI
HHCCCCEEEECCHHHCCEEEEEEECCCCCCEEEEECCCCCHHHCCCCCEEEECCCCCEEE
LDEVHRLPNLFQNLRGLIDRGRRSGRKAGRFLLLGSASIDLLKQSGETLAGRIAYLEMHP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCHHEEEEEEEEECC
IDGLEVGAGDLGPLWVRGGFPDSFLAASDRASQRWRLDFIRTYLERDIPLLGPRIPAETL
CCCCEECCCCCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
RRFWTMLAHHQAGLLNAAEFARALGVDGKTVASYLDLLVDLLLVRRLEPWHANVGKRLVK
HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
SPRVYVRDSGITHTLLGLATQEDVLGHPVAGASWEGFVIETLTAAAPAGTLSHFYRTAAG
CCCEEEECCCCHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCC
AEIDLLLTLPGQRLWAIEVKRSLTPKVEKGFHQACEDLAPERRIVVFPGAERFPLKHGIE
CCEEEEEECCCCEEEEEEHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHCCCC
AMPLRDLGRALLGEA
CCCHHHHHHHHHCCC
>Mature Secondary Structure
MQKQLGHASAVATSISPKPADSNPYEPARREPRFFLAQSELHSIIARMIERRITTELTEL
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
LDSMPAVALLGPRQVGKTTLALEIAERRPSIYLDLESDADRARLAEPELYLADHEDKLVI
HHCCCCEEEECCHHHCCEEEEEEECCCCCCEEEEECCCCCHHHCCCCCEEEECCCCCEEE
LDEVHRLPNLFQNLRGLIDRGRRSGRKAGRFLLLGSASIDLLKQSGETLAGRIAYLEMHP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCHHEEEEEEEEECC
IDGLEVGAGDLGPLWVRGGFPDSFLAASDRASQRWRLDFIRTYLERDIPLLGPRIPAETL
CCCCEECCCCCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
RRFWTMLAHHQAGLLNAAEFARALGVDGKTVASYLDLLVDLLLVRRLEPWHANVGKRLVK
HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
SPRVYVRDSGITHTLLGLATQEDVLGHPVAGASWEGFVIETLTAAAPAGTLSHFYRTAAG
CCCEEEECCCCHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCC
AEIDLLLTLPGQRLWAIEVKRSLTPKVEKGFHQACEDLAPERRIVVFPGAERFPLKHGIE
CCEEEEEECCCCEEEEEEHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHCCCC
AMPLRDLGRALLGEA
CCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]