| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488251
Identifier: 13488251
GI number: 13488251
Start: 217828
End: 218736
Strand: Direct
Name: 13488251
Synonym: mlr9236
Alternate gene names: NA
Gene position: 217828-218736 (Clockwise)
Preceding gene: 13488358
Following gene: 13488252
Centisome position: 61.9
GC content: 60.62
Gene sequence:
>909_bases ATGGGAACCAGCGGCCAACTTTTGCTTCCTGGAAATGTCGGTCGCGAAACGCGCCAGGTCGGCAACACAGTCAAGCTCAG TGTCGCCACCAACCGGTCATGGCTCGACGAGGAGTGCCAAAGAAAATCAGTCAGCGATTGGATGACGGTCACCTTCTATG GCCGATTTCGTGCCGCGCCAGATTCACAAAGGCGACAAGGTGCTCGTCCAGGCGCGCGTGTCGGAAAGCATGCATCAGAA GGACGGCGTCATCCACTCCACCACGGACGTGATCGCCGAAGACATCGATCTGTTCGCTCACGCCAGCCCGAGACCCGATC AGTGAAGCCGGCGCGTAAAACCATTGGCGCTGCCCTTGCGATCGCGGCGACATCTTGCGGCCTCGCCCTGATAATGCCGC CAGTCGCCCCAGCGCAGGTTCCCACGTTGGACACCGCCACGACGCTCGACGTCTATACCCCGGGCGACCACGTAGCGAGC AATCCGATGCGCGTCGTGGTCCTCTCGCCCACGACGTTTCAGGATGTCGAAAGCAAGCAAAAATACCGGCTCTACGGGGT TGACGCCTGCGACCTGGGCCAGACCGCGAGGCTCGGAAAGCAGACATGGCCATGTGGCGTTGTCGCCATGGCATGGCTCG TGAACGCCACCTTGAACAAATGGGTTGTCTGCTCGCCGATCCGGAAAGACGAGGCTGTCATCGTCGCGCGTTGCGCAACC GGCGAAATGGCCGACATCGCAGGCGAAATGCTGAAAGCCGGTATAGCCATCACCCTCCCCGACGATCCCGATCGTCGCAT CCCCATCTACGCCCAGCTCGAGCGTGAAGCTCGCGAATCCTATCGCGGTATTTGGGCCAGCGCCTTCCAGATGCCTTGGC TGTACCGGAAATCCTCGCCAAATCCATGA
Upstream 100 bases:
>100_bases AAGTGCGCCTCCCCCACCGTCCGGATTTTGAGCCTGAGACACTTGCACAGCGATTTGTGAAATAGTTTATTGATCCAATG AACCTGGAGAGAAGTTAGTC
Downstream 100 bases:
>100_bases CCCCGGAGCACGACATGCGTCCCTTTCGCCATATCCTTCCCGTCGTTGCATCCGCGGCGTTGCTCGCCGGCTGCGCCGGG CGTTCGCCGGATGCTTCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MGTSGQLLLPGNVGRETRQVGNTVKLSVATNRSWLDEECQRKSVSDWMTVTFYGRFRAAPDSQRRQGARPGARVGKHASE GRRHPLHHGRDRRRHRSVRSRQPETRSVKPARKTIGAALAIAATSCGLALIMPPVAPAQVPTLDTATTLDVYTPGDHVAS NPMRVVVLSPTTFQDVESKQKYRLYGVDACDLGQTARLGKQTWPCGVVAMAWLVNATLNKWVVCSPIRKDEAVIVARCAT GEMADIAGEMLKAGIAITLPDDPDRRIPIYAQLEREARESYRGIWASAFQMPWLYRKSSPNP
Sequences:
>Translated_302_residues MGTSGQLLLPGNVGRETRQVGNTVKLSVATNRSWLDEECQRKSVSDWMTVTFYGRFRAAPDSQRRQGARPGARVGKHASE GRRHPLHHGRDRRRHRSVRSRQPETRSVKPARKTIGAALAIAATSCGLALIMPPVAPAQVPTLDTATTLDVYTPGDHVAS NPMRVVVLSPTTFQDVESKQKYRLYGVDACDLGQTARLGKQTWPCGVVAMAWLVNATLNKWVVCSPIRKDEAVIVARCAT GEMADIAGEMLKAGIAITLPDDPDRRIPIYAQLEREARESYRGIWASAFQMPWLYRKSSPNP >Mature_301_residues GTSGQLLLPGNVGRETRQVGNTVKLSVATNRSWLDEECQRKSVSDWMTVTFYGRFRAAPDSQRRQGARPGARVGKHASEG RRHPLHHGRDRRRHRSVRSRQPETRSVKPARKTIGAALAIAATSCGLALIMPPVAPAQVPTLDTATTLDVYTPGDHVASN PMRVVVLSPTTFQDVESKQKYRLYGVDACDLGQTARLGKQTWPCGVVAMAWLVNATLNKWVVCSPIRKDEAVIVARCATG EMADIAGEMLKAGIAITLPDDPDRRIPIYAQLEREARESYRGIWASAFQMPWLYRKSSPNP
Specific function: Unknown
COG id: COG0629
COG function: function code L; Single-stranded DNA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33338; Mature: 33206
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTSGQLLLPGNVGRETRQVGNTVKLSVATNRSWLDEECQRKSVSDWMTVTFYGRFRAAP CCCCCCEEECCCCCHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEEEEEEECCC DSQRRQGARPGARVGKHASEGRRHPLHHGRDRRRHRSVRSRQPETRSVKPARKTIGAALA CHHHHCCCCCCHHHCCCHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH IAATSCGLALIMPPVAPAQVPTLDTATTLDVYTPGDHVASNPMRVVVLSPTTFQDVESKQ HHHHHCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHCCC KYRLYGVDACDLGQTARLGKQTWPCGVVAMAWLVNATLNKWVVCSPIRKDEAVIVARCAT CEEEEECCHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEECC GEMADIAGEMLKAGIAITLPDDPDRRIPIYAQLEREARESYRGIWASAFQMPWLYRKSSP CCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC NP CC >Mature Secondary Structure GTSGQLLLPGNVGRETRQVGNTVKLSVATNRSWLDEECQRKSVSDWMTVTFYGRFRAAP CCCCCEEECCCCCHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEEEEEEECCC DSQRRQGARPGARVGKHASEGRRHPLHHGRDRRRHRSVRSRQPETRSVKPARKTIGAALA CHHHHCCCCCCHHHCCCHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH IAATSCGLALIMPPVAPAQVPTLDTATTLDVYTPGDHVASNPMRVVVLSPTTFQDVESKQ HHHHHCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHCCC KYRLYGVDACDLGQTARLGKQTWPCGVVAMAWLVNATLNKWVVCSPIRKDEAVIVARCAT CEEEEECCHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEEEECC GEMADIAGEMLKAGIAITLPDDPDRRIPIYAQLEREARESYRGIWASAFQMPWLYRKSSP CCHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC NP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA