| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488223
Identifier: 13488223
GI number: 13488223
Start: 103583
End: 104626
Strand: Direct
Name: 13488223
Synonym: mlr9127
Alternate gene names: NA
Gene position: 103583-104626 (Clockwise)
Preceding gene: 13488222
Following gene: 13488352
Centisome position: 29.43
GC content: 55.17
Gene sequence:
>1044_bases GTGACCGACTACTTCTCCTACTTAGGTCTGCAACCGTCCCGAGAGGAACTTATCCAACGGTTTGGGCTTGAGCTGGATAA GTTAATGACGCTTGACTTAAATCTAACTGGGCGACCGTCGTATCTCTATTCGCGGGAACGGAATGGGTCAGGGGAAGCGA GTTCAACCGCTTTTGCACAACTTCTCTTGGACTCTCTCGCCTCAAAGGATGTCTCAATTCTCGTGACCGGGTGGCCGGTT AGGTCTTCGATTGACGTTTCAATCGGCGAGGCTGATGGGCCGATTGGGGCAGCGGCCATTGCGCGAGCTCTTCACATGAC GACCGGCGCAGTCTCCCTTGCGATGGCGCCTGCGCCTTTGGCTGCACAAGTTGCGGCGGCATTTAGATCGGCAGGCGCGA CGATCATCGATTTTGACGCGTTCGAAAGGCTTTCAAAGGGGAACGAAAGGCTCTTTGGCGTTGCGATCGTCGGGCTAGAT GTTGATTGCGACCTGTCGAACTATTTTGCTGAACTGTTGCAGAACGTCAAACCGAAGACGGTCATTGCGATTGAGCATTA CGGCTTTTCGGCTGAGGGCAAGCCGTATCATGGGACCGGTAACGTTGTAGAACCAGGGACAGCGCTCACACATCCATTAT TCGACCAGGCCATGGCCGAGGGCCTAATTTGTGGTTCGTGTGTCGACAATCCCAATGAGGTTGGGACCAGCCGTCTTCAC GACGCTGGTGTTAAGCATCCACCCATGAGAAACGACTTTGCTAACCTTCTTGTGGGAAGCTCTGCCAATAGCGCAGCCTT TGCATTGTGTGCCGCGCTTGCAGGATTGTCCGCTACGCCCACAGCGGCTTTTCCCGGTAGTTTGGATGAAGCTGGGATCG CAGCAACGTTGGCCCACGGAGCGATCGATCCTTTCAGCGGAACCGCGGATCCATCGTTCGGCGTCGATACGATTGAGAGC CCCTACCATGCGTGGATAGCAGATCTTATGGGGCGGCTCGCCAAAGGGTACTGCGTGGCGGCCGCAACGGAACGTCACTT ATAA
Upstream 100 bases:
>100_bases GCGCTTGCGACGTGGGCGAGTATCTACCTCGCCTAGGACGGAGCGTCCGAATCTCTATCAACTAAATTCGGCAACGATCA ATATCGACTGGAGACGAACC
Downstream 100 bases:
>100_bases ATGGCTCGACTGCACAAGTCACCAAATCCATTCAATCACTTGAAAAGGCTCATGCTTTGAACCTATTTGAGAAGGAACGA TATGTCAGATCTTGATCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTDYFSYLGLQPSREELIQRFGLELDKLMTLDLNLTGRPSYLYSRERNGSGEASSTAFAQLLLDSLASKDVSILVTGWPV RSSIDVSIGEADGPIGAAAIARALHMTTGAVSLAMAPAPLAAQVAAAFRSAGATIIDFDAFERLSKGNERLFGVAIVGLD VDCDLSNYFAELLQNVKPKTVIAIEHYGFSAEGKPYHGTGNVVEPGTALTHPLFDQAMAEGLICGSCVDNPNEVGTSRLH DAGVKHPPMRNDFANLLVGSSANSAAFALCAALAGLSATPTAAFPGSLDEAGIAATLAHGAIDPFSGTADPSFGVDTIES PYHAWIADLMGRLAKGYCVAAATERHL
Sequences:
>Translated_347_residues MTDYFSYLGLQPSREELIQRFGLELDKLMTLDLNLTGRPSYLYSRERNGSGEASSTAFAQLLLDSLASKDVSILVTGWPV RSSIDVSIGEADGPIGAAAIARALHMTTGAVSLAMAPAPLAAQVAAAFRSAGATIIDFDAFERLSKGNERLFGVAIVGLD VDCDLSNYFAELLQNVKPKTVIAIEHYGFSAEGKPYHGTGNVVEPGTALTHPLFDQAMAEGLICGSCVDNPNEVGTSRLH DAGVKHPPMRNDFANLLVGSSANSAAFALCAALAGLSATPTAAFPGSLDEAGIAATLAHGAIDPFSGTADPSFGVDTIES PYHAWIADLMGRLAKGYCVAAATERHL >Mature_346_residues TDYFSYLGLQPSREELIQRFGLELDKLMTLDLNLTGRPSYLYSRERNGSGEASSTAFAQLLLDSLASKDVSILVTGWPVR SSIDVSIGEADGPIGAAAIARALHMTTGAVSLAMAPAPLAAQVAAAFRSAGATIIDFDAFERLSKGNERLFGVAIVGLDV DCDLSNYFAELLQNVKPKTVIAIEHYGFSAEGKPYHGTGNVVEPGTALTHPLFDQAMAEGLICGSCVDNPNEVGTSRLHD AGVKHPPMRNDFANLLVGSSANSAAFALCAALAGLSATPTAAFPGSLDEAGIAATLAHGAIDPFSGTADPSFGVDTIESP YHAWIADLMGRLAKGYCVAAATERHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36277; Mature: 36146
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDYFSYLGLQPSREELIQRFGLELDKLMTLDLNLTGRPSYLYSRERNGSGEASSTAFAQ CCCHHHHHCCCCCHHHHHHHHCCCHHHEEEEEEECCCCCCHHEECCCCCCCCHHHHHHHH LLLDSLASKDVSILVTGWPVRSSIDVSIGEADGPIGAAAIARALHMTTGAVSLAMAPAPL HHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCCH AAQVAAAFRSAGATIIDFDAFERLSKGNERLFGVAIVGLDVDCDLSNYFAELLQNVKPKT HHHHHHHHHHCCCEEEEHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHCCCCCE VIAIEHYGFSAEGKPYHGTGNVVEPGTALTHPLFDQAMAEGLICGSCVDNPNEVGTSRLH EEEEEECCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCEECCCCCCCHHHCHHHHH DAGVKHPPMRNDFANLLVGSSANSAAFALCAALAGLSATPTAAFPGSLDEAGIAATLAHG HCCCCCCCCCCHHHHHEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHC AIDPFSGTADPSFGVDTIESPYHAWIADLMGRLAKGYCVAAATERHL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCC >Mature Secondary Structure TDYFSYLGLQPSREELIQRFGLELDKLMTLDLNLTGRPSYLYSRERNGSGEASSTAFAQ CCHHHHHCCCCCHHHHHHHHCCCHHHEEEEEEECCCCCCHHEECCCCCCCCHHHHHHHH LLLDSLASKDVSILVTGWPVRSSIDVSIGEADGPIGAAAIARALHMTTGAVSLAMAPAPL HHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCCH AAQVAAAFRSAGATIIDFDAFERLSKGNERLFGVAIVGLDVDCDLSNYFAELLQNVKPKT HHHHHHHHHHCCCEEEEHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHCCCCCE VIAIEHYGFSAEGKPYHGTGNVVEPGTALTHPLFDQAMAEGLICGSCVDNPNEVGTSRLH EEEEEECCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCEECCCCCCCHHHCHHHHH DAGVKHPPMRNDFANLLVGSSANSAAFALCAALAGLSATPTAAFPGSLDEAGIAATLAHG HCCCCCCCCCCHHHHHEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHC AIDPFSGTADPSFGVDTIESPYHAWIADLMGRLAKGYCVAAATERHL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA