| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488209
Identifier: 13488209
GI number: 13488209
Start: 61788
End: 62387
Strand: Direct
Name: 13488209
Synonym: mlr9067
Alternate gene names: NA
Gene position: 61788-62387 (Clockwise)
Preceding gene: 13488346
Following gene: 13488347
Centisome position: 17.56
GC content: 56.0
Gene sequence:
>600_bases ATGATTTGCTGGCGGGTCAAAGAATGGACGTTGCAGATGCGCATTGGCACGACGGCGGGTTTCGTCCTGTTCGTGATGGC ATTCTTCGTCAGCGCGATGACTGCGAACGGACAGGAGACCAGCCTTGTCGGCATTTACCAGGGTTCGGAGCTAACCGCCG CCGCCAACCATCTGGGACGAGGCGGATACGAGCTGTCGGATGGAACCCAAGTGTCTTTCGACAAGTGGTACCATAGCAGC TGGGTCGATATGCGATTTGAAATGTTGACTCAGCTATCGGACGATTTCGGTATCCTGTGGGGCGCGAGCACCGGTCAGCG TGCCGAAAAGGTCCGAATCGAGCCGGGTGTGAAAGTCGGCTTTATTTTGCAAAAGCGACCGACAGCATCCACGACGCTTT CTCTCACCATCAGTTCAATTTTGGGCGGGAACCTGACGGAACGACCTTGCACAGCTGACTATGGCGCCATCGGCGGTGTG CAGATGGTGAATTGCCGGCTGGCCGCGTCGCAACTGCGGCCCTCGGACAGTTTGAAATATCTGACAAACCTCGAGCCAAG CCGATGGAAATTCGACCTTCGGTTCAGGGGTGAATTCTAG
Upstream 100 bases:
>100_bases GAATGAACACGTTGCCCGTCGGGTGCCATGCGTCTGCGGCGAGGGCCCCCAGAGGATTTGAAGATGCGGCGAGGGACTGC AGTACTCAATTCGACCGCAA
Downstream 100 bases:
>100_bases CGATGGTGCAAGGAAGGCCGTAGATTTCGTTGATGAAGAACAATCAGATAGGGAAGTTTATTATGCACAAAACACAATTG TTCCCGACCGGTTTCGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MICWRVKEWTLQMRIGTTAGFVLFVMAFFVSAMTANGQETSLVGIYQGSELTAAANHLGRGGYELSDGTQVSFDKWYHSS WVDMRFEMLTQLSDDFGILWGASTGQRAEKVRIEPGVKVGFILQKRPTASTTLSLTISSILGGNLTERPCTADYGAIGGV QMVNCRLAASQLRPSDSLKYLTNLEPSRWKFDLRFRGEF
Sequences:
>Translated_199_residues MICWRVKEWTLQMRIGTTAGFVLFVMAFFVSAMTANGQETSLVGIYQGSELTAAANHLGRGGYELSDGTQVSFDKWYHSS WVDMRFEMLTQLSDDFGILWGASTGQRAEKVRIEPGVKVGFILQKRPTASTTLSLTISSILGGNLTERPCTADYGAIGGV QMVNCRLAASQLRPSDSLKYLTNLEPSRWKFDLRFRGEF >Mature_199_residues MICWRVKEWTLQMRIGTTAGFVLFVMAFFVSAMTANGQETSLVGIYQGSELTAAANHLGRGGYELSDGTQVSFDKWYHSS WVDMRFEMLTQLSDDFGILWGASTGQRAEKVRIEPGVKVGFILQKRPTASTTLSLTISSILGGNLTERPCTADYGAIGGV QMVNCRLAASQLRPSDSLKYLTNLEPSRWKFDLRFRGEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22127; Mature: 22127
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICWRVKEWTLQMRIGTTAGFVLFVMAFFVSAMTANGQETSLVGIYQGSELTAAANHLGR CEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHCCC GGYELSDGTQVSFDKWYHSSWVDMRFEMLTQLSDDFGILWGASTGQRAEKVRIEPGVKVG CCEECCCCCEEEHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCEEE FILQKRPTASTTLSLTISSILGGNLTERPCTADYGAIGGVQMVNCRLAASQLRPSDSLKY EEEECCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCHHH LTNLEPSRWKFDLRFRGEF HHCCCCCCEEEEEEECCCC >Mature Secondary Structure MICWRVKEWTLQMRIGTTAGFVLFVMAFFVSAMTANGQETSLVGIYQGSELTAAANHLGR CEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHCCC GGYELSDGTQVSFDKWYHSSWVDMRFEMLTQLSDDFGILWGASTGQRAEKVRIEPGVKVG CCEECCCCCEEEHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEECCCCEEE FILQKRPTASTTLSLTISSILGGNLTERPCTADYGAIGGVQMVNCRLAASQLRPSDSLKY EEEECCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCHHH LTNLEPSRWKFDLRFRGEF HHCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA