| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is grsB [H]
Identifier: 13488203
GI number: 13488203
Start: 46497
End: 48380
Strand: Direct
Name: grsB [H]
Synonym: mlr9052
Alternate gene names: 13488203
Gene position: 46497-48380 (Clockwise)
Preceding gene: 13488202
Following gene: 13488204
Centisome position: 13.21
GC content: 55.63
Gene sequence:
>1884_bases GTGCTTTGGTATGCATCCGAATTTCCTCGTCGTCCTGCTGTCATTTTCGGAACAGAGGCGATCAACTACATGGATTTGTG GCTGCGAGCCTGTGAGATAGCTCGTGCCCTAAAAACTGGACGTGAAGCGGGTTTGGACCGCGTGGCCCTTTATTTTCCCA TCGGTATTGACCGGATCGCGGCGATCCTCTGCTGTCAAATCCTAGGTGTTTCCTACGTTCCTGTGGAACCAAATCTTCCA GCGAGTCGCATTCGCGAGATGCTTGCGCAAGCGGATCCGAGCGTGCTCCTCAGTTCATCGGCCATCTGTTCGGCGATCCT CAAGGAGGTCTCGTCGTGCCCGACAGTGATGGTCGAGGAAGTTGGAGTGGGCGCCGCTGATCGTGGATCGTTGAGCCGAG ATTTGGCGCTGCCGCCGAAGTCCGGTGGCTACGTTATCTTTACCTCGGGTTCGACTGGCAAGCCGAAGGCAGTCAACATG GGAGGAGCAGCACTTCAAAACCTCGTGGACTGGCAGATCGAACTTTCGACGCTGTCAGACAATGCGGCAACGGCTCAGTT CGCCCCCATTTCGTTCGATGTATCGTTTCAGGAGATATTCTCCACGCTCTGTTCTGGTGGGAGTATCGTCCTCCTAGCGA ATGAACAGCGGATCGACCCCGATTTGCTTTCGGACGAGATACTGCGTGCCCGGGTGGAGCGATTGTTTCTGCCATTTATC GCTCTCCAACAATTGGCGTCGAATTGTGTGGAGCGCAATTTGTTTCCCGACAGTCTACGGGAGATCCACACCGCCGGCGA ACAACTCGTGGTCTCTTCCGCTTTGCGCGAGTTTTTCATCAAGCTCCCCCAGTGTCGGCTCTTCAATCAATATGGTCCCT CCGAGACACACGTCGTCACCTGTCACGAGCTTGATAGCAATCCAGCGGAATGGCCTAGGTTACCGCCTATCGGTCGGCCT CTACCGAATGTCGTACTGTTCATTTTAGGTGAAGATGGCCGACCGGTGAGGTTAGGAGAGGTGGGAGAGTTGTATATTGG TGGCGTCTGCCTCGCGCAGGGGTATTTCCAGGACAAGGAGCGAACAGACGAACGGTTCATGACTATAGATATTAACGGCA CGCTAACGAGATTGTATCGGACCGGCGACTTTGCGACATCAGATGAAAGTGGTTGTTTTTTCTTCTGTGGTCGCCGAGAC CACCAAATCAAGATCGATGGCTACAGGGTTGAACTTGGGGAAATTGAGAGCGTTATAGCGGATCACCCAGACGTAGCCGA AGTCGCCGTGGTTTTCGATCGTGATGCAAATGGAACGGGACGACTGATCGCCTGCCTGACGAGCAAAGATGGGGCGCCAA CCGACTGTCTCGAGACAGTAGTTCGCGCCCATGTCCGTGAGAAGCTCCCTGGCTACATGGCGCCAGACCGTGTCCAGATC ATCGGCGCGATGCCTAAAACTGCGAGTGGCAAGGTCGATCGGAAATCAATCGCGGAAAGGCTGTGTGCCGAAAAGGTCAA CCCCTCGGCACCGCCTGTCGAGAAGCCAGCCTGTGCCACTACGAGCGGATCGGTGAAGAACAGCGATCTGTGCGGCGCGA TCACCTCTTACTGGCGGGAGCTCCTGGACCACCCCTTGCTCTCGGACTCGGATAATGTGTTCGATTTTGGCGCGCGTTCG ATCATGGTCCCGGAGCTTCAACGCCGCCTTCGCCGTCAATTCGGGATTAGCATGCCCGCGATCTTGGTCTTCCGGCATCC TTCGCCGAGGGAGCTTGCAGACTTTTTATCGCGAAGATCGGTGAAGGGCGATGCATTGAACACTACGTTGGCTGGTCTCG CAAACCGGCGTGTGTCGACCAAAAGACGCGCTTCTCCGCGCTGA
Upstream 100 bases:
>100_bases CCGAAGCAAAGCCGTTTGGCAGTGTCCTCGCATTCTGAGTGAAAAGATGCAGAGTTTAACAAGGGCCGCAGGTCCGTCAG ATCGGACCATTGCAGCTTCC
Downstream 100 bases:
>100_bases TCCTGGGCAGCGATGACCCCTCCAGCAGATCAGATTAGCGCGCTCCGGAAGCCAAAAAGCAGATAAACGGACCAGCGACG AGGCAAAAATGAACGGCCCC
Product: peptide synthetase
Products: pyrophosphate; AMP; enterobactin; pyrophosphate; L-Seryl-AMP [C]
Alternate protein names: Gramicidin S synthase II; ATP-dependent proline adenylase; ProA; Proline activase; ATP-dependent valine adenylase; ValA; Valine activase; ATP-dependent ornithine adenylase; OrnA; Ornithine activase; ATP-dependent leucine adenylase; LeuA; Leucine activase [H]
Number of amino acids: Translated: 627; Mature: 627
Protein sequence:
>627_residues MLWYASEFPRRPAVIFGTEAINYMDLWLRACEIARALKTGREAGLDRVALYFPIGIDRIAAILCCQILGVSYVPVEPNLP ASRIREMLAQADPSVLLSSSAICSAILKEVSSCPTVMVEEVGVGAADRGSLSRDLALPPKSGGYVIFTSGSTGKPKAVNM GGAALQNLVDWQIELSTLSDNAATAQFAPISFDVSFQEIFSTLCSGGSIVLLANEQRIDPDLLSDEILRARVERLFLPFI ALQQLASNCVERNLFPDSLREIHTAGEQLVVSSALREFFIKLPQCRLFNQYGPSETHVVTCHELDSNPAEWPRLPPIGRP LPNVVLFILGEDGRPVRLGEVGELYIGGVCLAQGYFQDKERTDERFMTIDINGTLTRLYRTGDFATSDESGCFFFCGRRD HQIKIDGYRVELGEIESVIADHPDVAEVAVVFDRDANGTGRLIACLTSKDGAPTDCLETVVRAHVREKLPGYMAPDRVQI IGAMPKTASGKVDRKSIAERLCAEKVNPSAPPVEKPACATTSGSVKNSDLCGAITSYWRELLDHPLLSDSDNVFDFGARS IMVPELQRRLRRQFGISMPAILVFRHPSPRELADFLSRRSVKGDALNTTLAGLANRRVSTKRRASPR
Sequences:
>Translated_627_residues MLWYASEFPRRPAVIFGTEAINYMDLWLRACEIARALKTGREAGLDRVALYFPIGIDRIAAILCCQILGVSYVPVEPNLP ASRIREMLAQADPSVLLSSSAICSAILKEVSSCPTVMVEEVGVGAADRGSLSRDLALPPKSGGYVIFTSGSTGKPKAVNM GGAALQNLVDWQIELSTLSDNAATAQFAPISFDVSFQEIFSTLCSGGSIVLLANEQRIDPDLLSDEILRARVERLFLPFI ALQQLASNCVERNLFPDSLREIHTAGEQLVVSSALREFFIKLPQCRLFNQYGPSETHVVTCHELDSNPAEWPRLPPIGRP LPNVVLFILGEDGRPVRLGEVGELYIGGVCLAQGYFQDKERTDERFMTIDINGTLTRLYRTGDFATSDESGCFFFCGRRD HQIKIDGYRVELGEIESVIADHPDVAEVAVVFDRDANGTGRLIACLTSKDGAPTDCLETVVRAHVREKLPGYMAPDRVQI IGAMPKTASGKVDRKSIAERLCAEKVNPSAPPVEKPACATTSGSVKNSDLCGAITSYWRELLDHPLLSDSDNVFDFGARS IMVPELQRRLRRQFGISMPAILVFRHPSPRELADFLSRRSVKGDALNTTLAGLANRRVSTKRRASPR >Mature_627_residues MLWYASEFPRRPAVIFGTEAINYMDLWLRACEIARALKTGREAGLDRVALYFPIGIDRIAAILCCQILGVSYVPVEPNLP ASRIREMLAQADPSVLLSSSAICSAILKEVSSCPTVMVEEVGVGAADRGSLSRDLALPPKSGGYVIFTSGSTGKPKAVNM GGAALQNLVDWQIELSTLSDNAATAQFAPISFDVSFQEIFSTLCSGGSIVLLANEQRIDPDLLSDEILRARVERLFLPFI ALQQLASNCVERNLFPDSLREIHTAGEQLVVSSALREFFIKLPQCRLFNQYGPSETHVVTCHELDSNPAEWPRLPPIGRP LPNVVLFILGEDGRPVRLGEVGELYIGGVCLAQGYFQDKERTDERFMTIDINGTLTRLYRTGDFATSDESGCFFFCGRRD HQIKIDGYRVELGEIESVIADHPDVAEVAVVFDRDANGTGRLIACLTSKDGAPTDCLETVVRAHVREKLPGYMAPDRVQI IGAMPKTASGKVDRKSIAERLCAEKVNPSAPPVEKPACATTSGSVKNSDLCGAITSYWRELLDHPLLSDSDNVFDFGARS IMVPELQRRLRRQFGISMPAILVFRHPSPRELADFLSRRSVKGDALNTTLAGLANRRVSTKRRASPR
Specific function: This protein is a multifunctional enzyme, able to activate and polymerize the amino acids Pro, Val, Orn and Leu. Activation sites for these AA consist of individual domains [H]
COG id: COG1020
COG function: function code Q; Non-ribosomal peptide synthetase modules and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 acyl carrier domains [H]
Homologues:
Organism=Homo sapiens, GI28416953, Length=536, Percent_Identity=23.5074626865672, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI45580730, Length=453, Percent_Identity=24.0618101545254, Blast_Score=100, Evalue=8e-21, Organism=Homo sapiens, GI115511026, Length=478, Percent_Identity=23.0125523012552, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI38505220, Length=474, Percent_Identity=22.9957805907173, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI156151445, Length=228, Percent_Identity=28.5087719298246, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI122937307, Length=487, Percent_Identity=22.9979466119097, Blast_Score=77, Evalue=5e-14, Organism=Escherichia coli, GI1786801, Length=595, Percent_Identity=29.9159663865546, Blast_Score=181, Evalue=1e-46, Organism=Escherichia coli, GI1790505, Length=530, Percent_Identity=24.1509433962264, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1788107, Length=237, Percent_Identity=29.957805907173, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1786810, Length=377, Percent_Identity=25.1989389920424, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786529, Length=524, Percent_Identity=25, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI221142682, Length=232, Percent_Identity=27.1551724137931, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17531443, Length=392, Percent_Identity=26.530612244898, Blast_Score=115, Evalue=7e-26, Organism=Caenorhabditis elegans, GI17556356, Length=458, Percent_Identity=24.4541484716157, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17550940, Length=504, Percent_Identity=24.2063492063492, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17558820, Length=492, Percent_Identity=25.2032520325203, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17557194, Length=388, Percent_Identity=25.5154639175258, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17538037, Length=376, Percent_Identity=24.468085106383, Blast_Score=72, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319591, Length=695, Percent_Identity=23.4532374100719, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6319264, Length=567, Percent_Identity=23.2804232804233, Blast_Score=80, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6319699, Length=400, Percent_Identity=25.5, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24648676, Length=460, Percent_Identity=29.5652173913043, Blast_Score=171, Evalue=2e-42, Organism=Drosophila melanogaster, GI62472339, Length=537, Percent_Identity=23.0912476722533, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI24667955, Length=537, Percent_Identity=23.0912476722533, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI24653035, Length=372, Percent_Identity=26.0752688172043, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI21355225, Length=381, Percent_Identity=26.509186351706, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24667959, Length=369, Percent_Identity=25.4742547425474, Blast_Score=76, Evalue=7e-14, Organism=Drosophila melanogaster, GI161076582, Length=379, Percent_Identity=24.802110817942, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI20130357, Length=232, Percent_Identity=29.7413793103448, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI24581924, Length=377, Percent_Identity=23.6074270557029, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI18859661, Length=176, Percent_Identity=28.4090909090909, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR006163 - InterPro: IPR006162 - InterPro: IPR001031 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding; PF00975 Thioesterase [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 68790; Mature: 68790
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS50075 ACP_DOMAIN ; PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWYASEFPRRPAVIFGTEAINYMDLWLRACEIARALKTGREAGLDRVALYFPIGIDRIA CCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH AILCCQILGVSYVPVEPNLPASRIREMLAQADPSVLLSSSAICSAILKEVSSCPTVMVEE HHHHHHHHCCEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEHHH VGVGAADRGSLSRDLALPPKSGGYVIFTSGSTGKPKAVNMGGAALQNLVDWQIELSTLSD HCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCHHHHHHHHHCEEEEEEECC NAATAQFAPISFDVSFQEIFSTLCSGGSIVLLANEQRIDPDLLSDEILRARVERLFLPFI CCCCEEECCEEECCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH ALQQLASNCVERNLFPDSLREIHTAGEQLVVSSALREFFIKLPQCRLFNQYGPSETHVVT HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEE CHELDSNPAEWPRLPPIGRPLPNVVLFILGEDGRPVRLGEVGELYIGGVCLAQGYFQDKE EEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEECHHHHHCCHHCCCC RTDERFMTIDINGTLTRLYRTGDFATSDESGCFFFCGRRDHQIKIDGYRVELGEIESVIA CCCCEEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEECEEEEHHHHHHHHC DHPDVAEVAVVFDRDANGTGRLIACLTSKDGAPTDCLETVVRAHVREKLPGYMAPDRVQI CCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE IGAMPKTASGKVDRKSIAERLCAEKVNPSAPPVEKPACATTSGSVKNSDLCGAITSYWRE EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LLDHPLLSDSDNVFDFGARSIMVPELQRRLRRQFGISMPAILVFRHPSPRELADFLSRRS HHCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCC VKGDALNTTLAGLANRRVSTKRRASPR CCCCHHHHHHHHHHHCCCCHHHCCCCC >Mature Secondary Structure MLWYASEFPRRPAVIFGTEAINYMDLWLRACEIARALKTGREAGLDRVALYFPIGIDRIA CCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH AILCCQILGVSYVPVEPNLPASRIREMLAQADPSVLLSSSAICSAILKEVSSCPTVMVEE HHHHHHHHCCEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEHHH VGVGAADRGSLSRDLALPPKSGGYVIFTSGSTGKPKAVNMGGAALQNLVDWQIELSTLSD HCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEECCCHHHHHHHHHCEEEEEEECC NAATAQFAPISFDVSFQEIFSTLCSGGSIVLLANEQRIDPDLLSDEILRARVERLFLPFI CCCCEEECCEEECCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH ALQQLASNCVERNLFPDSLREIHTAGEQLVVSSALREFFIKLPQCRLFNQYGPSETHVVT HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEE CHELDSNPAEWPRLPPIGRPLPNVVLFILGEDGRPVRLGEVGELYIGGVCLAQGYFQDKE EEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEECHHHHHCCHHCCCC RTDERFMTIDINGTLTRLYRTGDFATSDESGCFFFCGRRDHQIKIDGYRVELGEIESVIA CCCCEEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEECEEEEHHHHHHHHC DHPDVAEVAVVFDRDANGTGRLIACLTSKDGAPTDCLETVVRAHVREKLPGYMAPDRVQI CCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE IGAMPKTASGKVDRKSIAERLCAEKVNPSAPPVEKPACATTSGSVKNSDLCGAITSYWRE EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LLDHPLLSDSDNVFDFGARSIMVPELQRRLRRQFGISMPAILVFRHPSPRELADFLSRRS HHCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCC VKGDALNTTLAGLANRRVSTKRRASPR CCCCHHHHHHHHHHHCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Phosphopantetheine. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Seryl-AMP 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Ser
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1560782; 2477357 [H]