Click here to switch to the map view.

The map label for this gene is 13488201

Identifier: 13488201

GI number: 13488201

Start: 40476

End: 41420

Strand: Direct

Name: 13488201

Synonym: mlr9042

Alternate gene names: NA

Gene position: 40476-41420 (Clockwise)

Preceding gene: 13488200

Following gene: 13488343

Centisome position: 11.5

GC content: 58.1

Gene sequence:

>945_bases
GTGAAAAGGGCACGAGCTGCGACGAATCTGCCGGAGACGCGGCAGCCTCGGAGTGCGCATTTCGCACAAGCCGGACAACG
ATGGAGTGATGATGTGGACGCCTCCACCACCGGCGTCAGCAAGCATGATATGTGTTTTGCTGTTGCCTCCCGGGAAAGCG
TAAGACCTTATGTCCTTCCTCGCAACAAAAATGATATGGCCGATGCCGAAGCCATCTGCGAAGCGGTGACGAGGCCGAAC
ATGCGCTTCGTTGCCGTGAAGACAGCAGCCCAACAATCGGTTCTGATGCTGCATCGCTGTCGAGCTCTTTTGGTCCGGCA
ACGAACCATGCTGGCGAACGCAATTCGCGCGCACCTGGCAGAATTCGGCATCGTCATGCCGCAAGGAATTCGTACTTTGC
TGACGGCCCTAATCGCGCCGAAAGATGAAGTAAACGACCTTCCCCATCTCGTCCGGGTTGCACTCGCTCCCATGGCAGCA
AACCTCATCGAGCTGGGTCAGCGCATCAAAGGACTGGAAATCGAGATTGCGCGCGAACATCGCGGCAACGAGACCAGTCG
TCGATTGGAAACTATTCCCGGATTTGGTGTCATGACATCAACAGCGATGGCAGCGACAGTGGCAGACCCGACAGCCTTCA
AATCGGGCCGTGAATTCGCCGCCTGGCTCGGCCTGACGCCAAGAGAGAGTTCATCGGGCGGCAAGCAACGGCTCGGAGGC
ATCACCAAGATGGGCGACGGATATCTTCGAACATTGCTTGTTGTCGGAGCGACGGCGGTGATCCGCTTCGCCCGCGAGGA
AGGATCCGCCAAGACGGCGTGGATCCGCAAGCTCATGGAGAAAAAGCCTGCGAAAGTCGTGGCGGTTGCGCTTGCCAACA
AGATGGCGCGCATAGCCTGGCCGCTGATGACGAGAGGAGAGGTTTACCGTGTCATCCCCGCTTGA

Upstream 100 bases:

>100_bases
TTGGCTGGCGGCGCGCAAAGTTCGGGGCAGCAAGAGGATTTGTGGGCGCGCTCGCACGAAGTATGTCGTCACCGTTGAAT
TTTGACGGGGCCGGGCGGAT

Downstream 100 bases:

>100_bases
ATTCGCGTGGGCTTGAACGCGACAACGAGTTGGTGAGGACGAAAGACACTTGACGAGAACCGGTCAGGGGCCGGGGGTTG
GAAAGCCCGAGGGGTGCAGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKRARAATNLPETRQPRSAHFAQAGQRWSDDVDASTTGVSKHDMCFAVASRESVRPYVLPRNKNDMADAEAICEAVTRPN
MRFVAVKTAAQQSVLMLHRCRALLVRQRTMLANAIRAHLAEFGIVMPQGIRTLLTALIAPKDEVNDLPHLVRVALAPMAA
NLIELGQRIKGLEIEIAREHRGNETSRRLETIPGFGVMTSTAMAATVADPTAFKSGREFAAWLGLTPRESSSGGKQRLGG
ITKMGDGYLRTLLVVGATAVIRFAREEGSAKTAWIRKLMEKKPAKVVAVALANKMARIAWPLMTRGEVYRVIPA

Sequences:

>Translated_314_residues
MKRARAATNLPETRQPRSAHFAQAGQRWSDDVDASTTGVSKHDMCFAVASRESVRPYVLPRNKNDMADAEAICEAVTRPN
MRFVAVKTAAQQSVLMLHRCRALLVRQRTMLANAIRAHLAEFGIVMPQGIRTLLTALIAPKDEVNDLPHLVRVALAPMAA
NLIELGQRIKGLEIEIAREHRGNETSRRLETIPGFGVMTSTAMAATVADPTAFKSGREFAAWLGLTPRESSSGGKQRLGG
ITKMGDGYLRTLLVVGATAVIRFAREEGSAKTAWIRKLMEKKPAKVVAVALANKMARIAWPLMTRGEVYRVIPA
>Mature_314_residues
MKRARAATNLPETRQPRSAHFAQAGQRWSDDVDASTTGVSKHDMCFAVASRESVRPYVLPRNKNDMADAEAICEAVTRPN
MRFVAVKTAAQQSVLMLHRCRALLVRQRTMLANAIRAHLAEFGIVMPQGIRTLLTALIAPKDEVNDLPHLVRVALAPMAA
NLIELGQRIKGLEIEIAREHRGNETSRRLETIPGFGVMTSTAMAATVADPTAFKSGREFAAWLGLTPRESSSGGKQRLGG
ITKMGDGYLRTLLVVGATAVIRFAREEGSAKTAWIRKLMEKKPAKVVAVALANKMARIAWPLMTRGEVYRVIPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 34388; Mature: 34388

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRARAATNLPETRQPRSAHFAQAGQRWSDDVDASTTGVSKHDMCFAVASRESVRPYVLP
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCCEEEC
RNKNDMADAEAICEAVTRPNMRFVAVKTAAQQSVLMLHRCRALLVRQRTMLANAIRAHLA
CCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFGIVMPQGIRTLLTALIAPKDEVNDLPHLVRVALAPMAANLIELGQRIKGLEIEIAREH
HHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHH
RGNETSRRLETIPGFGVMTSTAMAATVADPTAFKSGREFAAWLGLTPRESSSGGKQRLGG
CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCCHHHHCC
ITKMGDGYLRTLLVVGATAVIRFAREEGSAKTAWIRKLMEKKPAKVVAVALANKMARIAW
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
PLMTRGEVYRVIPA
HHCCCCCEEEECCC
>Mature Secondary Structure
MKRARAATNLPETRQPRSAHFAQAGQRWSDDVDASTTGVSKHDMCFAVASRESVRPYVLP
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCCEEEC
RNKNDMADAEAICEAVTRPNMRFVAVKTAAQQSVLMLHRCRALLVRQRTMLANAIRAHLA
CCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFGIVMPQGIRTLLTALIAPKDEVNDLPHLVRVALAPMAANLIELGQRIKGLEIEIAREH
HHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHH
RGNETSRRLETIPGFGVMTSTAMAATVADPTAFKSGREFAAWLGLTPRESSSGGKQRLGG
CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCCCCCCCCCHHHHCC
ITKMGDGYLRTLLVVGATAVIRFAREEGSAKTAWIRKLMEKKPAKVVAVALANKMARIAW
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
PLMTRGEVYRVIPA
HHCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]