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The map label for this gene is potD [C]

Identifier: 13488182

GI number: 13488182

Start: 13484

End: 14587

Strand: Direct

Name: potD [C]

Synonym: mlr9013

Alternate gene names: 13488182

Gene position: 13484-14587 (Clockwise)

Preceding gene: 13488181

Following gene: 13488183

Centisome position: 3.83

GC content: 52.63

Gene sequence:

>1104_bases
ATGACAGACAAAATCTTCAATATCCGCGTTGACCGCAGAAGCTTTCTTGCTGGCTCGGCTGCAATTGCAGCTTCAACGCT
GCCATCACCTCTGATCAGATCAGCCTCTGCACAGGAGTTTGCGGGAAAGCAGATTAGGGTCCTTACGTGGTCCGATCCGA
CTGGCCAGGCCGCCGTAAAGAACATTATGCAAACCTTCGAGGCAAAGACCGGCGCCAAGGTCATTGCCGACCTTACCGGT
AGCACATCAGATATGATTGCGAAGATCAAGGCGTCCGCATCCAAGCCGCAATATGATGTCGTCGTCCTATCGGGGTTTGG
CGCGGACTCTTTGGCCGAAGCCGGGCTTCTAGAAAAGCCCGATACTAGCGCAATCGCCAACCTTTCCCGGGTCGATCCCA
AGTATCAAACCGGTGCCAATGGTCATGGGATCGGCTACTTCCTTTGGAGTGACGGCCTTATCTACAATACGAACCGCTAT
ACCACCCCACCGAAATCCTACGATGTAATCTGGAACGCGGCCAATGAGGGTAAGATCGTACTTCCCACACCGGATAATCT
CGGTGCGCTTGAACTAATAATTGTCGCAGCGAAGGCCGCTGGCGGTGACCTCAAGAATCCTGACCCAGGATTTGAACTGC
TGAAAAAGATGAAGGGTAAGGCCTTGGCCGTCACAACGAACTCGAACCAAATCGCCGACTTGTTTCGTTCGAACGCCGTG
AATGCAGCAGGTGTAATGTCTCCTTTAACTTTCTCGACATTCATCCCGAACCCGGAGTTCAACATTGGTGGCACGTATGA
TCTCGCCGAAGGTTTCTTCGTGGATCTTCAGTACATGGTCATCCCGAAAGGCCACCCAGGCGATGCTGCAACCGTGAATG
CATTCCTTAATCACGCTCTTGATCCAGTGGTGCAAGGTAAGATGGCCGAAGAGGTCTGGTACGGTCCAATCAACCAAGAT
GCAATTTTGTCGGACAAGGCAAAACAGAGCCCGTTCATTCCAAGCCCCGCAGTGATCAAGGAACGCGCCAACAGGTTGGA
TTCTGGCTTCCTTGCTTCGGTGCGTGACGACTGGATCCAGCGCTACACGGACGCAGTAATGTAA

Upstream 100 bases:

>100_bases
ACGAGCAATGGGGTTGAGCGCCTCACCGGTTCGAACGGGCGTGCACTTCTGATCAAGTGATCAGAAACTAAGAGGGGTCC
TAACAAAGGGAGTAAAGAGC

Downstream 100 bases:

>100_bases
GATCAGGTTCGGTGTTGGGTCGGCCACTTGGCCCAACACCGGCCCGCCTCATCTTTCACAAGTGCAATCTTCTGAGGTGA
CATGGAACAGAATCCTGTCC

Product: hypothetical protein

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: ABC Transporter

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTDKIFNIRVDRRSFLAGSAAIAASTLPSPLIRSASAQEFAGKQIRVLTWSDPTGQAAVKNIMQTFEAKTGAKVIADLTG
STSDMIAKIKASASKPQYDVVVLSGFGADSLAEAGLLEKPDTSAIANLSRVDPKYQTGANGHGIGYFLWSDGLIYNTNRY
TTPPKSYDVIWNAANEGKIVLPTPDNLGALELIIVAAKAAGGDLKNPDPGFELLKKMKGKALAVTTNSNQIADLFRSNAV
NAAGVMSPLTFSTFIPNPEFNIGGTYDLAEGFFVDLQYMVIPKGHPGDAATVNAFLNHALDPVVQGKMAEEVWYGPINQD
AILSDKAKQSPFIPSPAVIKERANRLDSGFLASVRDDWIQRYTDAVM

Sequences:

>Translated_367_residues
MTDKIFNIRVDRRSFLAGSAAIAASTLPSPLIRSASAQEFAGKQIRVLTWSDPTGQAAVKNIMQTFEAKTGAKVIADLTG
STSDMIAKIKASASKPQYDVVVLSGFGADSLAEAGLLEKPDTSAIANLSRVDPKYQTGANGHGIGYFLWSDGLIYNTNRY
TTPPKSYDVIWNAANEGKIVLPTPDNLGALELIIVAAKAAGGDLKNPDPGFELLKKMKGKALAVTTNSNQIADLFRSNAV
NAAGVMSPLTFSTFIPNPEFNIGGTYDLAEGFFVDLQYMVIPKGHPGDAATVNAFLNHALDPVVQGKMAEEVWYGPINQD
AILSDKAKQSPFIPSPAVIKERANRLDSGFLASVRDDWIQRYTDAVM
>Mature_366_residues
TDKIFNIRVDRRSFLAGSAAIAASTLPSPLIRSASAQEFAGKQIRVLTWSDPTGQAAVKNIMQTFEAKTGAKVIADLTGS
TSDMIAKIKASASKPQYDVVVLSGFGADSLAEAGLLEKPDTSAIANLSRVDPKYQTGANGHGIGYFLWSDGLIYNTNRYT
TPPKSYDVIWNAANEGKIVLPTPDNLGALELIIVAAKAAGGDLKNPDPGFELLKKMKGKALAVTTNSNQIADLFRSNAVN
AAGVMSPLTFSTFIPNPEFNIGGTYDLAEGFFVDLQYMVIPKGHPGDAATVNAFLNHALDPVVQGKMAEEVWYGPINQDA
ILSDKAKQSPFIPSPAVIKERANRLDSGFLASVRDDWIQRYTDAVM

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. Polyamine Binding Protein. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 460 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39318; Mature: 39187

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKIFNIRVDRRSFLAGSAAIAASTLPSPLIRSASAQEFAGKQIRVLTWSDPTGQAAVK
CCCCEEEEEECHHHHHCCCHHHHHHCCCHHHHHCCCHHHHCCCEEEEEEECCCCCHHHHH
NIMQTFEAKTGAKVIADLTGSTSDMIAKIKASASKPQYDVVVLSGFGADSLAEAGLLEKP
HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHCCCCCCC
DTSAIANLSRVDPKYQTGANGHGIGYFLWSDGLIYNTNRYTTPPKSYDVIWNAANEGKIV
CHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCEEEEEECCCCCEEE
LPTPDNLGALELIIVAAKAAGGDLKNPDPGFELLKKMKGKALAVTTNSNQIADLFRSNAV
EECCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC
NAAGVMSPLTFSTFIPNPEFNIGGTYDLAEGFFVDLQYMVIPKGHPGDAATVNAFLNHAL
CHHHCCCCCCHHEECCCCCCCCCCCHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHH
DPVVQGKMAEEVWYGPINQDAILSDKAKQSPFIPSPAVIKERANRLDSGFLASVRDDWIQ
HHHHHCHHHHHHCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
RYTDAVM
HHHHHCC
>Mature Secondary Structure 
TDKIFNIRVDRRSFLAGSAAIAASTLPSPLIRSASAQEFAGKQIRVLTWSDPTGQAAVK
CCCEEEEEECHHHHHCCCHHHHHHCCCHHHHHCCCHHHHCCCEEEEEEECCCCCHHHHH
NIMQTFEAKTGAKVIADLTGSTSDMIAKIKASASKPQYDVVVLSGFGADSLAEAGLLEKP
HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHCCCCCCC
DTSAIANLSRVDPKYQTGANGHGIGYFLWSDGLIYNTNRYTTPPKSYDVIWNAANEGKIV
CHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCEEEEEECCCCCEEE
LPTPDNLGALELIIVAAKAAGGDLKNPDPGFELLKKMKGKALAVTTNSNQIADLFRSNAV
EECCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC
NAAGVMSPLTFSTFIPNPEFNIGGTYDLAEGFFVDLQYMVIPKGHPGDAATVNAFLNHAL
CHHHCCCCCCHHEECCCCCCCCCCCHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHH
DPVVQGKMAEEVWYGPINQDAILSDKAKQSPFIPSPAVIKERANRLDSGFLASVRDDWIQ
HHHHHCHHHHHHCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
RYTDAVM
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA