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The map label for this gene is 13488180

Identifier: 13488180

GI number: 13488180

Start: 2138

End: 3256

Strand: Direct

Name: 13488180

Synonym: mlr9002

Alternate gene names: NA

Gene position: 2138-3256 (Clockwise)

Preceding gene: NA

Following gene: 13488342

Centisome position: 0.61

GC content: 60.23

Gene sequence:

>1119_bases
ATGGAAGATTATAGCGAAATTTTCGTAGGATTGGATGTTTCGAAGGATCGGCATGCTGTTGCTCTCGCCGAGAGCGGGCG
TAGCGGCGAGGTTCGATATGTCGGAGAGATATCCTCCGATAGTGCGTCAGTACGCCGCCTCGTCCGCAAGCTCGGACGCC
CGGGTGTGCGATTGAGATTCTGCTATGAGGCTGGGCCCACCAGATACGGTCTGAAGCGGGAGATCGAAGCGCTTGGCCAC
GAGTGCGCCGTGATTGCTCCGTCCCTGATCCCGCGCAAGCCTGGCGATCGGGTCAAGACGAACCGCCGCGATGCCGAGAA
ACTTGCCCGGCTGTTCCGTGCCGGTGAGCTGACGGAGATCTGGACGCCGGACGCTGCTCATGAGGCTATGCGTGACCTGA
TCCGCGCCCGCGAGGCTGCGGTGAAGGATCGAACCCGCAAGCGGCATGAGATTCGATCCTTCCTGTTGCGACATGGCAAG
ATTTATCCGGGCCTGAAGGCCTGGGGGACGAAGTATCTCAGATGGCTGCATGGACTGAGTTTCTCATATCGTAGCCAGGA
AGCTGTCTTGCAGGAGTTGATCCTCGCAGAGTCGCAGTGCCGAGAAAGAGTAGTGCGCCTGGAAAAGGCAATCGAAGACG
GCCTGCTCGACTGGCCACTCGCGCCGGTAGTCGAACGCTTGCAGGCTTTGCGTGGGGTTCAGCTCATTTGTGCGGCTACC
TTCATGGTCGAAATCGGCGATGTACGCCGCTTTGCCAACCCGCGACAACTGATGGCTTATCTCGGACTTGTGCCCTCGGA
GCGCTCGACCGGGGACGCCGTGCGACGGGGTGGTATCACCAAGACTGGGAATGCCCGAGTGCGCCGCGTCTTGGCCGAGA
GCGCCTGGACTTACCGCTATCCGGCCAAACTGGGGAAAAGAAAATACTGCGAAAGCCGCCACATGCCAGAAGTCGTGCGA
GACATAGCGTGGAACGCACAGGCGCGCTTGACCAAGCGCTACAGAGCCCTGATCGCGCGTGGCAAGCGCAGCACCGTGGC
TGTGACCGCAATAGCTCGGGAACTCGCTGCTTTCATGTGGGCCATCGCACGAGCGGATGAGCAGCAGGCAGGAACCTGA

Upstream 100 bases:

>100_bases
TGTCCTTTTGGTTGCCGGCTGTGAGGTGGTTCGCCCTACACTGGCAGTGTTGAAACGAGGGTTGCTCGTGGAGCCTATCC
TCATGCCAGGAGGACGAACC

Downstream 100 bases:

>100_bases
TCCTCGGTCGCGACGAACAATCATCGCGCCTATCGGCGGGGACGTGGCATTCAAGGGGGAATTCCCGGCACCGCTTTGTG
GCCGGCAATGCCGACGCCCG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MEDYSEIFVGLDVSKDRHAVALAESGRSGEVRYVGEISSDSASVRRLVRKLGRPGVRLRFCYEAGPTRYGLKREIEALGH
ECAVIAPSLIPRKPGDRVKTNRRDAEKLARLFRAGELTEIWTPDAAHEAMRDLIRAREAAVKDRTRKRHEIRSFLLRHGK
IYPGLKAWGTKYLRWLHGLSFSYRSQEAVLQELILAESQCRERVVRLEKAIEDGLLDWPLAPVVERLQALRGVQLICAAT
FMVEIGDVRRFANPRQLMAYLGLVPSERSTGDAVRRGGITKTGNARVRRVLAESAWTYRYPAKLGKRKYCESRHMPEVVR
DIAWNAQARLTKRYRALIARGKRSTVAVTAIARELAAFMWAIARADEQQAGT

Sequences:

>Translated_372_residues
MEDYSEIFVGLDVSKDRHAVALAESGRSGEVRYVGEISSDSASVRRLVRKLGRPGVRLRFCYEAGPTRYGLKREIEALGH
ECAVIAPSLIPRKPGDRVKTNRRDAEKLARLFRAGELTEIWTPDAAHEAMRDLIRAREAAVKDRTRKRHEIRSFLLRHGK
IYPGLKAWGTKYLRWLHGLSFSYRSQEAVLQELILAESQCRERVVRLEKAIEDGLLDWPLAPVVERLQALRGVQLICAAT
FMVEIGDVRRFANPRQLMAYLGLVPSERSTGDAVRRGGITKTGNARVRRVLAESAWTYRYPAKLGKRKYCESRHMPEVVR
DIAWNAQARLTKRYRALIARGKRSTVAVTAIARELAAFMWAIARADEQQAGT
>Mature_372_residues
MEDYSEIFVGLDVSKDRHAVALAESGRSGEVRYVGEISSDSASVRRLVRKLGRPGVRLRFCYEAGPTRYGLKREIEALGH
ECAVIAPSLIPRKPGDRVKTNRRDAEKLARLFRAGELTEIWTPDAAHEAMRDLIRAREAAVKDRTRKRHEIRSFLLRHGK
IYPGLKAWGTKYLRWLHGLSFSYRSQEAVLQELILAESQCRERVVRLEKAIEDGLLDWPLAPVVERLQALRGVQLICAAT
FMVEIGDVRRFANPRQLMAYLGLVPSERSTGDAVRRGGITKTGNARVRRVLAESAWTYRYPAKLGKRKYCESRHMPEVVR
DIAWNAQARLTKRYRALIARGKRSTVAVTAIARELAAFMWAIARADEQQAGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 42203; Mature: 42203

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDYSEIFVGLDVSKDRHAVALAESGRSGEVRYVGEISSDSASVRRLVRKLGRPGVRLRF
CCCHHHEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEE
CYEAGPTRYGLKREIEALGHECAVIAPSLIPRKPGDRVKTNRRDAEKLARLFRAGELTEI
EECCCCCCHHHHHHHHHCCCCHHEECCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
WTPDAAHEAMRDLIRAREAAVKDRTRKRHEIRSFLLRHGKIYPGLKAWGTKYLRWLHGLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
FSYRSQEAVLQELILAESQCRERVVRLEKAIEDGLLDWPLAPVVERLQALRGVQLICAAT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FMVEIGDVRRFANPRQLMAYLGLVPSERSTGDAVRRGGITKTGNARVRRVLAESAWTYRY
HHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCEEC
PAKLGKRKYCESRHMPEVVRDIAWNAQARLTKRYRALIARGKRSTVAVTAIARELAAFMW
HHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AIARADEQQAGT
HHHHCCHHCCCC
>Mature Secondary Structure
MEDYSEIFVGLDVSKDRHAVALAESGRSGEVRYVGEISSDSASVRRLVRKLGRPGVRLRF
CCCHHHEEEECCCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEE
CYEAGPTRYGLKREIEALGHECAVIAPSLIPRKPGDRVKTNRRDAEKLARLFRAGELTEI
EECCCCCCHHHHHHHHHCCCCHHEECCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
WTPDAAHEAMRDLIRAREAAVKDRTRKRHEIRSFLLRHGKIYPGLKAWGTKYLRWLHGLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
FSYRSQEAVLQELILAESQCRERVVRLEKAIEDGLLDWPLAPVVERLQALRGVQLICAAT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FMVEIGDVRRFANPRQLMAYLGLVPSERSTGDAVRRGGITKTGNARVRRVLAESAWTYRY
HHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCEEC
PAKLGKRKYCESRHMPEVVRDIAWNAQARLTKRYRALIARGKRSTVAVTAIARELAAFMW
HHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AIARADEQQAGT
HHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]