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The map label for this gene is 13488177

Identifier: 13488177

GI number: 13488177

Start: 346048

End: 347274

Strand: Reverse

Name: 13488177

Synonym: mll9388

Alternate gene names: NA

Gene position: 347274-346048 (Counterclockwise)

Preceding gene: 13488178

Following gene: 13488176

Centisome position: 98.68

GC content: 61.78

Gene sequence:

>1227_bases
ATGGCCGGGAGGACAACAATGAAAATTGTCTATGTGGTTGGGACCTGCGATACAAAGGGCAGCGAGCTGCGCTATCTCCG
CGATCTTATCCGGGATGCAGGGTGCGACGTCGTTCTGGTCGACGTTTCGGTGTCGGAGTTTCACAGCGAAGCTTCGGATG
TCGATGTCCAGCCGGCGGAGGTGGCGCGCTGCCATCCGAACCCGCTGAAGGCCGAGGAGCTCAAGGACCGGGGCAAGGCA
GTCGCCGCTATGTCGCAGGCCTTGGTGGAGTACATCCGATCACGCCCGGACGTCGACGGCATCATCGGTGCGGGCGGCTC
GGGAGGAACTGCCTTGATCGCGCCAGCAATGCGCGCTCTCCCGATCGGCGTTCCGAAGGTGCTTGTTTCGACCGTCGCCT
CCGGCAATGTCGCCCCTTATGTGGGGCCAACCGACATCAGCATGATGTATTCAGTGACCGACGTGTCGGGACTCAACCGC
ATCTCGCGGGTGGTCCTCGCCAACGCGGCCCATTCCATTGCCGGGATGGTACTCAAGCAGGTCGGCGCCGCAGCCGACGA
GAGGCCCGCAATCGGCCTGACAATGTTTGGTGTCACGACGCCCTGTGTCCAGGCGGTAACACGGGCGTTGGAGGCAAACT
TCGACTGCCTGGTGTTTCATGCTACCGGAACAGGTGGGCAGTCCTTTGAGAAGCTCGCGGACTCTGGCCTGCTGGTCGGG
GGGATTGATGTGTCTACCACCGAGGTCTGCGACTATCTGGTAGGAGGCGTTTTCCCCTGTACGCCCGATCGCTTCGGGGC
CTTCGCGCGGACCAAACTGCCTTATGTGGGCTCCTGCGGCGCGCTCGACATGGTCAATTTCGGGGCGATGGAAACGGTTC
CGAGCCAATTTCGCTCGCGCCGACTGCACGTGCACAATCCCCAGGTCACGCTGATGCGAACGAACCCGGAGGAGTGCAGC
AGGATCGGTGAATGGATCGGCGAGCGACTGAACCTCTGTGAGGGGCCGGTACGCTTTCTCATTCCGGAGCTGGGCGTCTC
GGCGATCGATGCGCCCGGTCAGCCCTTCCACGATCCCGAAGCCGACGCTGTCCTGTTCGCAGCGCTTGAACGCACACTCC
GCTGCACCGACAAGCGACAGCTGGCGCGCGTTCCCCTTCACATAAACGATCCGCAATTCGCGGACCTCCTTGTCACAAAC
CTTAAAGAGGCTTTTCGTGAGCACTGA

Upstream 100 bases:

>100_bases
GGGACATACCCAATTCTACCCAAAACATCGGTATGCGCCAATTGATTTGCTGCCGGCGAGGCGACTAGGATTTTGTGAGG
TCAGGGCGGCTGACTGAGGA

Downstream 100 bases:

>100_bases
TACCTGCATCAAGCGTCCGACCCGCTCGGAGCTGGTCGACCGTTTCCAGAAGAAGATCCGGGCCGGAGAGCCGATCATCG
GCGGCGGCGCCGGCACCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MAGRTTMKIVYVVGTCDTKGSELRYLRDLIRDAGCDVVLVDVSVSEFHSEASDVDVQPAEVARCHPNPLKAEELKDRGKA
VAAMSQALVEYIRSRPDVDGIIGAGGSGGTALIAPAMRALPIGVPKVLVSTVASGNVAPYVGPTDISMMYSVTDVSGLNR
ISRVVLANAAHSIAGMVLKQVGAAADERPAIGLTMFGVTTPCVQAVTRALEANFDCLVFHATGTGGQSFEKLADSGLLVG
GIDVSTTEVCDYLVGGVFPCTPDRFGAFARTKLPYVGSCGALDMVNFGAMETVPSQFRSRRLHVHNPQVTLMRTNPEECS
RIGEWIGERLNLCEGPVRFLIPELGVSAIDAPGQPFHDPEADAVLFAALERTLRCTDKRQLARVPLHINDPQFADLLVTN
LKEAFREH

Sequences:

>Translated_408_residues
MAGRTTMKIVYVVGTCDTKGSELRYLRDLIRDAGCDVVLVDVSVSEFHSEASDVDVQPAEVARCHPNPLKAEELKDRGKA
VAAMSQALVEYIRSRPDVDGIIGAGGSGGTALIAPAMRALPIGVPKVLVSTVASGNVAPYVGPTDISMMYSVTDVSGLNR
ISRVVLANAAHSIAGMVLKQVGAAADERPAIGLTMFGVTTPCVQAVTRALEANFDCLVFHATGTGGQSFEKLADSGLLVG
GIDVSTTEVCDYLVGGVFPCTPDRFGAFARTKLPYVGSCGALDMVNFGAMETVPSQFRSRRLHVHNPQVTLMRTNPEECS
RIGEWIGERLNLCEGPVRFLIPELGVSAIDAPGQPFHDPEADAVLFAALERTLRCTDKRQLARVPLHINDPQFADLLVTN
LKEAFREH
>Mature_407_residues
AGRTTMKIVYVVGTCDTKGSELRYLRDLIRDAGCDVVLVDVSVSEFHSEASDVDVQPAEVARCHPNPLKAEELKDRGKAV
AAMSQALVEYIRSRPDVDGIIGAGGSGGTALIAPAMRALPIGVPKVLVSTVASGNVAPYVGPTDISMMYSVTDVSGLNRI
SRVVLANAAHSIAGMVLKQVGAAADERPAIGLTMFGVTTPCVQAVTRALEANFDCLVFHATGTGGQSFEKLADSGLLVGG
IDVSTTEVCDYLVGGVFPCTPDRFGAFARTKLPYVGSCGALDMVNFGAMETVPSQFRSRRLHVHNPQVTLMRTNPEECSR
IGEWIGERLNLCEGPVRFLIPELGVSAIDAPGQPFHDPEADAVLFAALERTLRCTDKRQLARVPLHINDPQFADLLVTNL
KEAFREH

Specific function: Unknown

COG id: COG5441

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0261 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008322 [H]

Pfam domain/function: PF06792 UPF0261 [H]

EC number: NA

Molecular weight: Translated: 43576; Mature: 43445

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRTTMKIVYVVGTCDTKGSELRYLRDLIRDAGCDVVLVDVSVSEFHSEASDVDVQPAE
CCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCCCHHH
VARCHPNPLKAEELKDRGKAVAAMSQALVEYIRSRPDVDGIIGAGGSGGTALIAPAMRAL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHC
PIGVPKVLVSTVASGNVAPYVGPTDISMMYSVTDVSGLNRISRVVLANAAHSIAGMVLKQ
CCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGAAADERPAIGLTMFGVTTPCVQAVTRALEANFDCLVFHATGTGGQSFEKLADSGLLVG
HCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCEEE
GIDVSTTEVCDYLVGGVFPCTPDRFGAFARTKLPYVGSCGALDMVNFGAMETVPSQFRSR
CCCCCHHHHHHHHHCCCCCCCCHHHCCHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHC
RLHVHNPQVTLMRTNPEECSRIGEWIGERLNLCEGPVRFLIPELGVSAIDAPGQPFHDPE
CEEEECCEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHCCCCCCCCCCCC
ADAVLFAALERTLRCTDKRQLARVPLHINDPQFADLLVTNLKEAFREH
HHHHHHHHHHHHHHHCCCHHHHCCCEEECCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGRTTMKIVYVVGTCDTKGSELRYLRDLIRDAGCDVVLVDVSVSEFHSEASDVDVQPAE
CCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCCCHHH
VARCHPNPLKAEELKDRGKAVAAMSQALVEYIRSRPDVDGIIGAGGSGGTALIAPAMRAL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHC
PIGVPKVLVSTVASGNVAPYVGPTDISMMYSVTDVSGLNRISRVVLANAAHSIAGMVLKQ
CCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGAAADERPAIGLTMFGVTTPCVQAVTRALEANFDCLVFHATGTGGQSFEKLADSGLLVG
HCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCEEE
GIDVSTTEVCDYLVGGVFPCTPDRFGAFARTKLPYVGSCGALDMVNFGAMETVPSQFRSR
CCCCCHHHHHHHHHCCCCCCCCHHHCCHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHC
RLHVHNPQVTLMRTNPEECSRIGEWIGERLNLCEGPVRFLIPELGVSAIDAPGQPFHDPE
CEEEECCEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHCCCCCCCCCCCC
ADAVLFAALERTLRCTDKRQLARVPLHINDPQFADLLVTNLKEAFREH
HHHHHHHHHHHHHHHCCCHHHHCCCEEECCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]