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The map label for this gene is 13488176

Identifier: 13488176

GI number: 13488176

Start: 345201

End: 346058

Strand: Reverse

Name: 13488176

Synonym: mll9387

Alternate gene names: NA

Gene position: 346058-345201 (Counterclockwise)

Preceding gene: 13488177

Following gene: 13488175

Centisome position: 98.34

GC content: 60.96

Gene sequence:

>858_bases
GTGAGCACTGATACCTGCATCAAGCGTCCGACCCGCTCGGAGCTGGTCGACCGTTTCCAGAAGAAGATCCGGGCCGGAGA
GCCGATCATCGGCGGCGGCGCCGGCACCGGCCTTTCCGCCAAGAGCGAAGAAGCCGGCGATATCGATCTCATTGTGATCT
ACAATTCCGGCCGCTATCGCATGGCCGGCCGCGGGTCCCTTGCCGGGCTTCTCGCCTATGGCAACGCCAATCAGATCGTC
GTCGACATGGCGCGCGAGGTTCTACCCGTTGTGCGGCACACCCCGGTGCTTGCCGGCGTCAATGGCACGGACCCGTTCAT
GGTGATGTCGACCTTCCTGCGCGAACTGAAGGAGATCGGCTTCGCCGGCGTGCAGAATTTCCCGACCGTGGGTCTGATCG
ACGGGCTGTTCCGTCAGAATCTCGAAGAGACGGGCATGAGCTATGCCCAGGAAGTCGAGATGATTGCCGAGGCCCATAAA
CTCGATCTCTTGACGACACCATACGTGTTCAGCCCGGAAGATGCGGTAGCGATGGCGAAAGCCGGAGCTGATATTCTCGT
CTGCCACATGGGACTGACGACGGGTGGCGCGATTGGTGCGCGTTCGGGCAAGTCGATGGACGATTGTGTCTCGTTGATCA
ACGAGTGCATTGAAGCCGCTCGAACGATCCGCGACGATATCATTATTCTGAGCCATGGCGGCCCGATCGCCAATCCGGAA
GATGCCCGTTTCATTCTCGACTCCTGCCAGGGATGCCATGGGTTTTACGGCGCAAGCAGCATGGAGCGGTTGCCGGCGGA
GGAGGCGATACGGTCTCAGACGCTGGCCTTCAAGGCGATCCGCCGCCAGCCAGCCTGA

Upstream 100 bases:

>100_bases
CTCCGCTGCACCGACAAGCGACAGCTGGCGCGCGTTCCCCTTCACATAAACGATCCGCAATTCGCGGACCTCCTTGTCAC
AAACCTTAAAGAGGCTTTTC

Downstream 100 bases:

>100_bases
GTGTAGAAGGGAAAGAAAAAGATGTCGGTTTTCAAAAGCGGAGAACAGCCACCCACTTGGTGCGAACTCAGGGAGTTCGA
ATTCGCGGACCTTTCTGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSTDTCIKRPTRSELVDRFQKKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIV
VDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHK
LDLLTTPYVFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPE
DARFILDSCQGCHGFYGASSMERLPAEEAIRSQTLAFKAIRRQPA

Sequences:

>Translated_285_residues
MSTDTCIKRPTRSELVDRFQKKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIV
VDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHK
LDLLTTPYVFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPE
DARFILDSCQGCHGFYGASSMERLPAEEAIRSQTLAFKAIRRQPA
>Mature_284_residues
STDTCIKRPTRSELVDRFQKKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVV
DMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKL
DLLTTPYVFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPED
ARFILDSCQGCHGFYGASSMERLPAEEAIRSQTLAFKAIRRQPA

Specific function: Unknown

COG id: COG5564

COG function: function code R; Predicted TIM-barrel enzyme, possibly a dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR009215 [H]

Pfam domain/function: PF09370 TIM-br_sig_trns [H]

EC number: NA

Molecular weight: Translated: 30538; Mature: 30407

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDTCIKRPTRSELVDRFQKKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYR
CCCCHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCEE
MAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEIG
ECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCC
FAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEECCCHHHHHHH
AGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPE
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCC
DARFILDSCQGCHGFYGASSMERLPAEEAIRSQTLAFKAIRRQPA
HHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STDTCIKRPTRSELVDRFQKKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYR
CCCHHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCEE
MAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEIG
ECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCC
FAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEECCCHHHHHHH
AGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPE
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCC
DARFILDSCQGCHGFYGASSMERLPAEEAIRSQTLAFKAIRRQPA
HHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]