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The map label for this gene is sopA [C]

Identifier: 13488162

GI number: 13488162

Start: 310032

End: 311246

Strand: Reverse

Name: sopA [C]

Synonym: mll9353

Alternate gene names: 13488162

Gene position: 311246-310032 (Counterclockwise)

Preceding gene: 13488163

Following gene: 13488161

Centisome position: 88.44

GC content: 57.04

Gene sequence:

>1215_bases
ATGTTGCAGACTCAAAACGTATCGACGGCCATTTCTTCCGACGCGCGGATTGCTCATCATGCGCGCCAGCTGTCTATGCA
GCTGCAGTTACTGCGAGAGCGCCTGTTTCCGCCGTCCTCCCAGAAGATGTTGAAGACGTTCACCTCCGGCGAGGCCGCTC
AGCTCGTCGGGGTATCGGACGGCTACCTACGGCAGCTTTCAATAGATGGCAAAGGCCCTTTGCCCGAGGTATCCCAGACG
GGACGACGTTCGTACTCGCTCGCCCAAATTCATGATTTGCGGCAGTACATGGCTTCTATCAAGCCGAAGGATGCACTCAC
GTACCTTCCGTGGCGGCAGAGAGGCGAAAAGCTCCAGACGATTGCCGTTGCCAACTTCAAGGGCGGCAGTGCAAAGACAA
CGACATCCATCTACCTCGCACAGTATCTTGCCTTGCAGGGATATCGTGTTCTCGCGGTTGATCTCGACCCCCAGGCTTCG
TTGTCGTCGATGCTCGGTGTTCAGCCGGAGTTCGATCTAGCGGAAGGCGATACGCTCTATGGTGCGATCCGTTACGACGA
GAAACGGCGGCCGCTGAAGGAAATAATCAGAAAAACGTACTTCGCTGGCCTCGACCTCGTTCCCGGGAACTTGGAACTGA
TGGAGTTCGAGCACGAAACCCCGACTGCACTGATGGAGCAGCGGAAAGCAAGCAACAGCGAAATCTTCTTTCGGCGCGTC
GGCATGGCCTTGGCCGAAGTCGAAGCCAATTATGACGTTGTGGTGGTCGACTGCCCGCCGCAGCTCGGATACCTGACGCT
TGGTGCGGTTTGCGCAGCGACATCGCTTCTGATCACCGTCCATCCTCAGATGGTCGACGTGGCGTCAATGTCGCAGTTTC
TGCTGATGACTTCCGACCTTCTGTCGGTCGTCCGGAAAGCAGGCGGCGATCTGAACCACGATTTCATCCGGTATGTCATA
ACGCGCCATGAGCCGCACGACGGTCCCCAGGCACAGATCGTTGCCTTGCTGAGAAGTCTTTTCGGGGACGAGGTTTTGGC
GGCGACAGTGCTGAAATCGACGGCGATCGCCGATGCCGGGCTTACGAAACAGACACTCTATGAAATCGAACGAGGACAAG
TCCGCCGCTCGACATTCGATAGGGCGATCGAATCCCTGGATGCAGTCAACGGGGAAATCCTCGGCGGCATCGAAAAGGCA
TGGGAGCGGTCATGA

Upstream 100 bases:

>100_bases
TTGAATCATAAGGGTTCTTGGCATGGTTACCGAATCGTGCCATGTTCGATACGGTTTTTTAGCAATTCGCCGCTAAAAAG
CGCATCGAAAGGGGAAATCG

Downstream 100 bases:

>100_bases
GCAGGCGAGACGTTCTGAACGGAATATTTGCCGATACGACCCGAGAGTTGGCCGCGGCCAACTTTTCCAAAGAGGCGGAT
GGCGGTCGTGTTCTGGCGGG

Product: replication protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MLQTQNVSTAISSDARIAHHARQLSMQLQLLRERLFPPSSQKMLKTFTSGEAAQLVGVSDGYLRQLSIDGKGPLPEVSQT
GRRSYSLAQIHDLRQYMASIKPKDALTYLPWRQRGEKLQTIAVANFKGGSAKTTTSIYLAQYLALQGYRVLAVDLDPQAS
LSSMLGVQPEFDLAEGDTLYGAIRYDEKRRPLKEIIRKTYFAGLDLVPGNLELMEFEHETPTALMEQRKASNSEIFFRRV
GMALAEVEANYDVVVVDCPPQLGYLTLGAVCAATSLLITVHPQMVDVASMSQFLLMTSDLLSVVRKAGGDLNHDFIRYVI
TRHEPHDGPQAQIVALLRSLFGDEVLAATVLKSTAIADAGLTKQTLYEIERGQVRRSTFDRAIESLDAVNGEILGGIEKA
WERS

Sequences:

>Translated_404_residues
MLQTQNVSTAISSDARIAHHARQLSMQLQLLRERLFPPSSQKMLKTFTSGEAAQLVGVSDGYLRQLSIDGKGPLPEVSQT
GRRSYSLAQIHDLRQYMASIKPKDALTYLPWRQRGEKLQTIAVANFKGGSAKTTTSIYLAQYLALQGYRVLAVDLDPQAS
LSSMLGVQPEFDLAEGDTLYGAIRYDEKRRPLKEIIRKTYFAGLDLVPGNLELMEFEHETPTALMEQRKASNSEIFFRRV
GMALAEVEANYDVVVVDCPPQLGYLTLGAVCAATSLLITVHPQMVDVASMSQFLLMTSDLLSVVRKAGGDLNHDFIRYVI
TRHEPHDGPQAQIVALLRSLFGDEVLAATVLKSTAIADAGLTKQTLYEIERGQVRRSTFDRAIESLDAVNGEILGGIEKA
WERS
>Mature_404_residues
MLQTQNVSTAISSDARIAHHARQLSMQLQLLRERLFPPSSQKMLKTFTSGEAAQLVGVSDGYLRQLSIDGKGPLPEVSQT
GRRSYSLAQIHDLRQYMASIKPKDALTYLPWRQRGEKLQTIAVANFKGGSAKTTTSIYLAQYLALQGYRVLAVDLDPQAS
LSSMLGVQPEFDLAEGDTLYGAIRYDEKRRPLKEIIRKTYFAGLDLVPGNLELMEFEHETPTALMEQRKASNSEIFFRRV
GMALAEVEANYDVVVVDCPPQLGYLTLGAVCAATSLLITVHPQMVDVASMSQFLLMTSDLLSVVRKAGGDLNHDFIRYVI
TRHEPHDGPQAQIVALLRSLFGDEVLAATVLKSTAIADAGLTKQTLYEIERGQVRRSTFDRAIESLDAVNGEILGGIEKA
WERS

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR017818 [H]

Pfam domain/function: PF01656 CbiA; PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 44705; Mature: 44705

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQTQNVSTAISSDARIAHHARQLSMQLQLLRERLFPPSSQKMLKTFTSGEAAQLVGVSD
CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCC
GYLRQLSIDGKGPLPEVSQTGRRSYSLAQIHDLRQYMASIKPKDALTYLPWRQRGEKLQT
CCEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHCCCCEEE
IAVANFKGGSAKTTTSIYLAQYLALQGYRVLAVDLDPQASLSSMLGVQPEFDLAEGDTLY
EEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEE
GAIRYDEKRRPLKEIIRKTYFAGLDLVPGNLELMEFEHETPTALMEQRKASNSEIFFRRV
EEEEECHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHH
GMALAEVEANYDVVVVDCPPQLGYLTLGAVCAATSLLITVHPQMVDVASMSQFLLMTSDL
HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHH
LSVVRKAGGDLNHDFIRYVITRHEPHDGPQAQIVALLRSLFGDEVLAATVLKSTAIADAG
HHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
LTKQTLYEIERGQVRRSTFDRAIESLDAVNGEILGGIEKAWERS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MLQTQNVSTAISSDARIAHHARQLSMQLQLLRERLFPPSSQKMLKTFTSGEAAQLVGVSD
CCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCC
GYLRQLSIDGKGPLPEVSQTGRRSYSLAQIHDLRQYMASIKPKDALTYLPWRQRGEKLQT
CCEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHCCCCEEE
IAVANFKGGSAKTTTSIYLAQYLALQGYRVLAVDLDPQASLSSMLGVQPEFDLAEGDTLY
EEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEE
GAIRYDEKRRPLKEIIRKTYFAGLDLVPGNLELMEFEHETPTALMEQRKASNSEIFFRRV
EEEEECHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHH
GMALAEVEANYDVVVVDCPPQLGYLTLGAVCAATSLLITVHPQMVDVASMSQFLLMTSDL
HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHH
LSVVRKAGGDLNHDFIRYVITRHEPHDGPQAQIVALLRSLFGDEVLAATVLKSTAIADAG
HHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
LTKQTLYEIERGQVRRSTFDRAIESLDAVNGEILGGIEKAWERS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]