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The map label for this gene is intQ [C]

Identifier: 13488151

GI number: 13488151

Start: 290773

End: 291744

Strand: Reverse

Name: intQ [C]

Synonym: mll9330

Alternate gene names: 13488151

Gene position: 291744-290773 (Counterclockwise)

Preceding gene: 13488152

Following gene: 13488150

Centisome position: 82.9

GC content: 58.23

Gene sequence:

>972_bases
ATGACCACAATCGTCACCTTGATCGAACTGAAGAACGACGCCGAGAGCTTCGTGACGTTCAAGCGAGCGATGGGCTACCG
CTATCAACGCGGTGCCTACGAGATCGACCGCTTTCTTCGCTTTTTGAAGCAACAGTGGAACGATGTAGACGCTATCCCGC
TGGCCGATGCGATCAGCAACTGGTGTGGGCGTCTTCCCGGCCGCAAGGCTATCTCGCTCAGTGGCGAGTTCGGGATAATC
CGGCAATTTTGCCTGCATCGCCGCCGTCGTGATCCCACCTGTTATGTGCCCGAGCACGCCTTCGCACCGGTGAAGGAGTC
ACCCTTCTTCCCGTACATTTTCAGCCGCGAAGAGGTCCTACGGATCCTCGCCGCTGCATCCGCGCACGAAGGCCATTTCA
TATGGGCGTCTATGTTGCGGAGGTTGGTCCTCATGCTCTATTGCACCGGAATCAGGCTCGGCGAAGCCACGCGCCTCAAG
ATGGAGGATGTCGATCTCGAGCGTGGAACGCTGCTGATCCGCAACAGCAAACGGCGGACCCGGATAGTCCCCATTCGCGA
AGATCTTATCGGCGAACTTCGGCTCTACCTTCACGATCGGCGTAGGTTGCTTCTCGACCTCCATCGTCCGGATCACGGTG
CCTTCTTCATTCGTCAAAAAGGTGGGCCGTTGGATATCAGTGGAGCCTCGGTGGCCATTCGAGAGATCTTACGCCGCCTC
GACATCAAGCCTGCACGCGGACGCGTTGGAGCGCGACCGTATGAGTTCAGGCACGCCTTTGCTGTCCACCGCCTCACAGC
CTGGGCAGAAGAAGGCGCCGACATCCATGTGAAGCTTCCGTTTCTCTCCGCATATCTGGGACATCAGAACATCCTTGGCA
CCGAGGTTTATCTGAAGGCGACCCCGCAACTGCTGGAGCTGGCAAGCACCCGGTTCGAGCAACATGTACGAAGCGCGAGG
CAGCCTCGATGA

Upstream 100 bases:

>100_bases
TATTGTCCGAACTGCTCGGCCACAGCGATCCGGAGTCGGTTTCCGCCTATGTGCGGATCGCCACGGATTCCCTTCGTGAG
ATTGCCCTACCGGTGCCCGC

Downstream 100 bases:

>100_bases
ACACCGCCACGCCCAAAGCGCTCTTTGCCCTCGTGGAGTCATTTTTCATCAGCTATCTGCCACGGCAGCGTGGTGCAAGC
CCGCATACGACACGTGCTTA

Product: integrase/recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MTTIVTLIELKNDAESFVTFKRAMGYRYQRGAYEIDRFLRFLKQQWNDVDAIPLADAISNWCGRLPGRKAISLSGEFGII
RQFCLHRRRRDPTCYVPEHAFAPVKESPFFPYIFSREEVLRILAAASAHEGHFIWASMLRRLVLMLYCTGIRLGEATRLK
MEDVDLERGTLLIRNSKRRTRIVPIREDLIGELRLYLHDRRRLLLDLHRPDHGAFFIRQKGGPLDISGASVAIREILRRL
DIKPARGRVGARPYEFRHAFAVHRLTAWAEEGADIHVKLPFLSAYLGHQNILGTEVYLKATPQLLELASTRFEQHVRSAR
QPR

Sequences:

>Translated_323_residues
MTTIVTLIELKNDAESFVTFKRAMGYRYQRGAYEIDRFLRFLKQQWNDVDAIPLADAISNWCGRLPGRKAISLSGEFGII
RQFCLHRRRRDPTCYVPEHAFAPVKESPFFPYIFSREEVLRILAAASAHEGHFIWASMLRRLVLMLYCTGIRLGEATRLK
MEDVDLERGTLLIRNSKRRTRIVPIREDLIGELRLYLHDRRRLLLDLHRPDHGAFFIRQKGGPLDISGASVAIREILRRL
DIKPARGRVGARPYEFRHAFAVHRLTAWAEEGADIHVKLPFLSAYLGHQNILGTEVYLKATPQLLELASTRFEQHVRSAR
QPR
>Mature_322_residues
TTIVTLIELKNDAESFVTFKRAMGYRYQRGAYEIDRFLRFLKQQWNDVDAIPLADAISNWCGRLPGRKAISLSGEFGIIR
QFCLHRRRRDPTCYVPEHAFAPVKESPFFPYIFSREEVLRILAAASAHEGHFIWASMLRRLVLMLYCTGIRLGEATRLKM
EDVDLERGTLLIRNSKRRTRIVPIREDLIGELRLYLHDRRRLLLDLHRPDHGAFFIRQKGGPLDISGASVAIREILRRLD
IKPARGRVGARPYEFRHAFAVHRLTAWAEEGADIHVKLPFLSAYLGHQNILGTEVYLKATPQLLELASTRFEQHVRSARQ
PR

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 37438; Mature: 37307

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIVTLIELKNDAESFVTFKRAMGYRYQRGAYEIDRFLRFLKQQWNDVDAIPLADAISN
CCEEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
WCGRLPGRKAISLSGEFGIIRQFCLHRRRRDPTCYVPEHAFAPVKESPFFPYIFSREEVL
HHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEECHHHHH
RILAAASAHEGHFIWASMLRRLVLMLYCTGIRLGEATRLKMEDVDLERGTLLIRNSKRRT
HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCCEEEEECCCCCE
RIVPIREDLIGELRLYLHDRRRLLLDLHRPDHGAFFIRQKGGPLDISGASVAIREILRRL
EECCHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHC
DIKPARGRVGARPYEFRHAFAVHRLTAWAEEGADIHVKLPFLSAYLGHQNILGTEVYLKA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCCCEEEEEC
TPQLLELASTRFEQHVRSARQPR
CHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTIVTLIELKNDAESFVTFKRAMGYRYQRGAYEIDRFLRFLKQQWNDVDAIPLADAISN
CEEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
WCGRLPGRKAISLSGEFGIIRQFCLHRRRRDPTCYVPEHAFAPVKESPFFPYIFSREEVL
HHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEECHHHHH
RILAAASAHEGHFIWASMLRRLVLMLYCTGIRLGEATRLKMEDVDLERGTLLIRNSKRRT
HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCCEEEEECCCCCE
RIVPIREDLIGELRLYLHDRRRLLLDLHRPDHGAFFIRQKGGPLDISGASVAIREILRRL
EECCHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHC
DIKPARGRVGARPYEFRHAFAVHRLTAWAEEGADIHVKLPFLSAYLGHQNILGTEVYLKA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCCCEEEEEC
TPQLLELASTRFEQHVRSARQPR
CHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]