| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488140
Identifier: 13488140
GI number: 13488140
Start: 275442
End: 275765
Strand: Reverse
Name: 13488140
Synonym: mll9309
Alternate gene names: NA
Gene position: 275765-275442 (Counterclockwise)
Preceding gene: 13488141
Following gene: 13488340
Centisome position: 78.36
GC content: 62.04
Gene sequence:
>324_bases ATGTCTATCCGCGATCGCCGCGCGCAGCTCTTTCGCATGGAAGAGGCTCGGCGCCAGACACAGCGCCAGCTCGATATGAT CGACCGGCAGATCATAGGGCGGATGACGGCGATCATTCCGCAGCTCAGACCACAACGTGCCGGTTATCGACGCGGGAGCG GCCCGGAGCCGGCAATGTTTCTCGAACGATATCGGGCCAACCTTGCAGCAATCACACTGGAGAGGCAGCACGAGATCGAC GCTCTCTCCCGCAAGCTCGCAAGGCAGGATGCTGCAATCGAGGTGCTGCGTGCCAGACTCCCACCGGACCTGATGCGCGC TTGA
Upstream 100 bases:
>100_bases AATACCATGTCGGCCGCTTTGGATTCGTCATCGATGTTGCACGCCACCGTGTCTATGGCGGGTCATCGAGCTTCACGGAT TGGCAGGGGAGGGACACATA
Downstream 100 bases:
>100_bases TACCGCGGCCTGGTCAGCGCTTGCGGACGAACTCCGTTCGCAACACCAGCCCCTTGATCGCATCATGCCGACAATCGATT TCTTCGGGATTGTCGGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSIRDRRAQLFRMEEARRQTQRQLDMIDRQIIGRMTAIIPQLRPQRAGYRRGSGPEPAMFLERYRANLAAITLERQHEID ALSRKLARQDAAIEVLRARLPPDLMRA
Sequences:
>Translated_107_residues MSIRDRRAQLFRMEEARRQTQRQLDMIDRQIIGRMTAIIPQLRPQRAGYRRGSGPEPAMFLERYRANLAAITLERQHEID ALSRKLARQDAAIEVLRARLPPDLMRA >Mature_106_residues SIRDRRAQLFRMEEARRQTQRQLDMIDRQIIGRMTAIIPQLRPQRAGYRRGSGPEPAMFLERYRANLAAITLERQHEIDA LSRKLARQDAAIEVLRARLPPDLMRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12566; Mature: 12435
Theoretical pI: Translated: 12.00; Mature: 12.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRDRRAQLFRMEEARRQTQRQLDMIDRQIIGRMTAIIPQLRPQRAGYRRGSGPEPAMF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH LERYRANLAAITLERQHEIDALSRKLARQDAAIEVLRARLPPDLMRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure SIRDRRAQLFRMEEARRQTQRQLDMIDRQIIGRMTAIIPQLRPQRAGYRRGSGPEPAMF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH LERYRANLAAITLERQHEIDALSRKLARQDAAIEVLRARLPPDLMRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA